{"id":"https://openalex.org/W3201941793","doi":"https://doi.org/10.1093/bioinformatics/btab679","title":"MuWU: Mutant-seq library analysis and annotation","display_name":"MuWU: Mutant-seq library analysis and annotation","publication_year":2021,"publication_date":"2021-09-23","ids":{"openalex":"https://openalex.org/W3201941793","doi":"https://doi.org/10.1093/bioinformatics/btab679","mag":"3201941793","pmid":"https://pubmed.ncbi.nlm.nih.gov/34586393"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btab679","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab679","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/3/837/42167067/btab679.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/38/3/837/42167067/btab679.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070035504","display_name":"Tyll St\u00f6cker","orcid":"https://orcid.org/0000-0001-7184-9472"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Tyll St\u00f6cker","raw_affiliation_strings":["Crop Bioinformatics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn , 53115 Bonn, Germany"],"raw_orcid":"https://orcid.org/0000-0001-7184-9472","affiliations":[{"raw_affiliation_string":"Crop Bioinformatics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn , 53115 Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041180390","display_name":"Lena Altrogge","orcid":"https://orcid.org/0000-0002-6871-235X"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lena Altrogge","raw_affiliation_strings":["Crop Bioinformatics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn , 53115 Bonn, Germany"],"raw_orcid":"https://orcid.org/0000-0002-6871-235X","affiliations":[{"raw_affiliation_string":"Crop Bioinformatics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn , 53115 Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067981987","display_name":"Caroline Marcon","orcid":"https://orcid.org/0000-0001-6699-9441"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Caroline Marcon","raw_affiliation_strings":["Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn , 53115 Bonn, Germany"],"raw_orcid":"https://orcid.org/0000-0001-6699-9441","affiliations":[{"raw_affiliation_string":"Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn , 53115 Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042528178","display_name":"Yan Naing Win","orcid":"https://orcid.org/0000-0002-4043-5194"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Yan Naing Win","raw_affiliation_strings":["Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn , 53115 Bonn, Germany"],"raw_orcid":"https://orcid.org/0000-0002-4043-5194","affiliations":[{"raw_affiliation_string":"Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn , 53115 Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012793034","display_name":"Frank Hochholdinger","orcid":"https://orcid.org/0000-0002-5155-0884"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Frank Hochholdinger","raw_affiliation_strings":["Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn , 53115 Bonn, Germany"],"raw_orcid":"https://orcid.org/0000-0002-5155-0884","affiliations":[{"raw_affiliation_string":"Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn , 53115 Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068160155","display_name":"Heiko Schoof","orcid":"https://orcid.org/0000-0002-1527-3752"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Heiko Schoof","raw_affiliation_strings":["Crop Bioinformatics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn , 53115 Bonn, Germany"],"raw_orcid":"https://orcid.org/0000-0002-1527-3752","affiliations":[{"raw_affiliation_string":"Crop Bioinformatics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn , 53115 Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5068160155","https://openalex.org/A5070035504"],"corresponding_institution_ids":["https://openalex.org/I135140700"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.8201,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.78758844,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":98},"biblio":{"volume":"38","issue":"3","first_page":"837","last_page":"838"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.5479999780654907,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.5479999780654907,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12828","display_name":"Plant Genetic and Mutation Studies","score":0.13779999315738678,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.07580000162124634,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.8109071850776672},{"id":"https://openalex.org/keywords/mutant","display_name":"Mutant","score":0.64510178565979},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5910329818725586},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5113305449485779},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4546946585178375},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.34908729791641235},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.28999456763267517},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.17967897653579712},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1753949522972107},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1687341332435608}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.8109071850776672},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.64510178565979},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5910329818725586},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5113305449485779},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4546946585178375},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.34908729791641235},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.28999456763267517},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17967897653579712},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1753949522972107},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1687341332435608}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003313","descriptor_name":"Zea mays","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003313","descriptor_name":"Zea mays","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003313","descriptor_name":"Zea mays","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015723","descriptor_name":"Gene Library","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015723","descriptor_name":"Gene Library","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015723","descriptor_name":"Gene Library","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016254","descriptor_name":"Mutagenesis, Insertional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016254","descriptor_name":"Mutagenesis, Insertional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016254","descriptor_name":"Mutagenesis, Insertional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btab679","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab679","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/3/837/42167067/btab679.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34586393","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34586393","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8756183","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8756183","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btab679","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab679","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/3/837/42167067/btab679.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G340651105","display_name":null,"funder_award_id":"MA 8427/1\u20131","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320324900","display_name":"Rheinische Friedrich-Wilhelms-Universit\u00e4t Bonn","ror":"https://ror.org/041nas322"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3201941793.pdf","grobid_xml":"https://content.openalex.org/works/W3201941793.grobid-xml"},"referenced_works_count":9,"referenced_works":["https://openalex.org/W2018040373","https://openalex.org/W2098115340","https://openalex.org/W2101641832","https://openalex.org/W2110417468","https://openalex.org/W2111990626","https://openalex.org/W2140615822","https://openalex.org/W2899669628","https://openalex.org/W2981590837","https://openalex.org/W3047940679"],"related_works":["https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W1971568933","https://openalex.org/W2013243191","https://openalex.org/W2117258802"],"abstract_inverted_index":{"MOTIVATION:":[0],"Insertional":[1],"mutagenesis":[2],"allows":[3],"for":[4,42,58,113,130,194],"the":[5,23,51,59,114,121,175,182],"creation":[6],"of":[7,25,31,34,53,61,75,116,120,146,152],"loss-of-function":[8],"mutations":[9],"on":[10],"a":[11,125,140,203],"genome-wide":[12],"scale.":[13],"In":[14],"theory,":[15],"every":[16],"gene":[17],"can":[18,187],"be":[19,93,189],"'knocked":[20],"out'":[21],"via":[22],"insertion":[24,118],"an":[26,96,106],"additional":[27],"DNA":[28],"sequence.":[29],"Resources":[30],"sequence-indexed":[32],"mutants":[33],"plant":[35],"and":[36,56,89,98,162,166,184,206],"animal":[37],"model":[38],"organisms":[39],"are":[40,215],"instrumental":[41],"functional":[43,131],"genomics":[44],"studies.":[45],"Such":[46],"repositories":[47],"significantly":[48],"speed":[49],"up":[50],"acquisition":[52],"interesting":[54],"genotypes":[55],"allow":[57],"validation":[60],"hypotheses":[62],"regarding":[63],"phenotypic":[64],"consequences":[65],"in":[66,95,133],"reverse":[67,126],"genetics.":[68],"To":[69],"create":[70],"such":[71,81,157],"resources,":[72],"comprehensive":[73],"sequencing":[74],"flanking":[76],"sequence":[77],"tags":[78],"using":[79],"protocols":[80],"as":[82,139,158],"Mutant-seq":[83,108,147],"requires":[84],"various":[85],"downstream":[86,143],"computational":[87],"tasks,":[88,156],"these":[90],"need":[91],"to":[92,174,191],"performed":[94],"efficient":[97],"reproducible":[99],"manner.":[100],"RESULTS:":[101],"Here,":[102],"we":[103],"present":[104],"MuWU,":[105],"automated":[107],"workflow":[109,205],"utility":[110],"initially":[111],"created":[112],"identification":[115],"Mutator":[117],"sites":[119],"BonnMu":[122],"resource,":[123],"representing":[124],"genetics":[127,132],"mutant":[128],"collection":[129],"maize":[134],"(Zea":[135],"mays).":[136],"MuWU":[137,170,193,201],"functions":[138],"fast,":[141],"one-stop":[142],"processing":[144],"pipeline":[145],"reads.":[148],"It":[149],"takes":[150],"care":[151],"all":[153],"complex":[154],"bioinformatic":[155],"identifying":[159],"tagged":[160],"genes":[161],"differentiating":[163],"between":[164],"germinal":[165],"somatic":[167],"mutations/insertions.":[168],"Furthermore,":[169],"automatically":[171],"assigns":[172],"insertions":[173],"corresponding":[176],"mutated":[177],"seed":[178],"stocks.":[179],"We":[180],"discuss":[181],"implementation":[183],"how":[185],"parameters":[186],"easily":[188],"adapted":[190],"use":[192],"other":[195],"species/transposable":[196],"elements.":[197],"AVAILABILITY":[198],"AND":[199],"IMPLEMENTATION:":[200],"is":[202],"Snakemake-based":[204],"freely":[207],"available":[208,216],"at":[209,217],"https://github.com/tgstoecker/MuWU.":[210],"SUPPLEMENTARY":[211],"INFORMATION:":[212],"Supplementary":[213],"data":[214],"Bioinformatics":[218],"online.":[219]},"counts_by_year":[{"year":2024,"cited_by_count":4}],"updated_date":"2026-08-09T07:27:16.801131","created_date":"2025-10-10T00:00:00"}
