{"id":"https://openalex.org/W2089747663","doi":"https://doi.org/10.1109/bibmw.2012.6470359","title":"Coarse-grained elastic networks, normal mode analysis and robotics-inspired methods for modeling protein conformational transitions","display_name":"Coarse-grained elastic networks, normal mode analysis and robotics-inspired methods for modeling protein conformational transitions","publication_year":2012,"publication_date":"2012-10-01","ids":{"openalex":"https://openalex.org/W2089747663","doi":"https://doi.org/10.1109/bibmw.2012.6470359","mag":"2089747663"},"language":"en","primary_location":{"id":"doi:10.1109/bibmw.2012.6470359","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibmw.2012.6470359","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026986589","display_name":"Ibrahim Al-Bluwi","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I190497903","display_name":"Laboratoire d'Analyse et d'Architecture des Syst\u00e8mes","ror":"https://ror.org/03vcm6439","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I190497903","https://openalex.org/I193033237","https://openalex.org/I196454796","https://openalex.org/I205747304","https://openalex.org/I4210095849","https://openalex.org/I4210152422","https://openalex.org/I4210159245","https://openalex.org/I4405258862","https://openalex.org/I4405259414"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ibrahim Al-Bluwi","raw_affiliation_strings":["LAAS, 7 avenue du colonel Roche, CNRS, Toulouse, France","LAAS, Universite de Toulouse, Toulouse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LAAS, 7 avenue du colonel Roche, CNRS, Toulouse, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I190497903"]},{"raw_affiliation_string":"LAAS, Universite de Toulouse, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I190497903"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030852563","display_name":"Marc Vaisset","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I190497903","display_name":"Laboratoire d'Analyse et d'Architecture des Syst\u00e8mes","ror":"https://ror.org/03vcm6439","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I190497903","https://openalex.org/I193033237","https://openalex.org/I196454796","https://openalex.org/I205747304","https://openalex.org/I4210095849","https://openalex.org/I4210152422","https://openalex.org/I4210159245","https://openalex.org/I4405258862","https://openalex.org/I4405259414"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marc Vaisset","raw_affiliation_strings":["LAAS, 7 avenue du colonel Roche, CNRS, Toulouse, France","LAAS, Universite de Toulouse, Toulouse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LAAS, 7 avenue du colonel Roche, CNRS, Toulouse, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I190497903"]},{"raw_affiliation_string":"LAAS, Universite de Toulouse, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I190497903"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053083218","display_name":"Thierry Sim\u00e9on","orcid":"https://orcid.org/0000-0001-9815-753X"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I190497903","display_name":"Laboratoire d'Analyse et d'Architecture des Syst\u00e8mes","ror":"https://ror.org/03vcm6439","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I190497903","https://openalex.org/I193033237","https://openalex.org/I196454796","https://openalex.org/I205747304","https://openalex.org/I4210095849","https://openalex.org/I4210152422","https://openalex.org/I4210159245","https://openalex.org/I4405258862","https://openalex.org/I4405259414"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Thierry Simeon","raw_affiliation_strings":["LAAS, 7 avenue du colonel Roche, CNRS, Toulouse, France","LAAS, Universite de Toulouse, Toulouse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LAAS, 7 avenue du colonel Roche, CNRS, Toulouse, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I190497903"]},{"raw_affiliation_string":"LAAS, Universite de Toulouse, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I190497903"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073142247","display_name":"Juan Cort\u00e9s","orcid":"https://orcid.org/0000-0002-4660-0306"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I190497903","display_name":"Laboratoire d'Analyse et d'Architecture des Syst\u00e8mes","ror":"https://ror.org/03vcm6439","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I190497903","https://openalex.org/I193033237","https://openalex.org/I196454796","https://openalex.org/I205747304","https://openalex.org/I4210095849","https://openalex.org/I4210152422","https://openalex.org/I4210159245","https://openalex.org/I4405258862","https://openalex.org/I4405259414"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Juan Cortes","raw_affiliation_strings":["LAAS, 7 avenue du colonel Roche, CNRS, Toulouse, France","LAAS, Universite de Toulouse, Toulouse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LAAS, 7 avenue du colonel Roche, CNRS, Toulouse, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I190497903"]},{"raw_affiliation_string":"LAAS, Universite de Toulouse, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I190497903"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.8613,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.90231469,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":97},"biblio":{"volume":"9","issue":null,"first_page":"40","last_page":"47"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.590272068977356},{"id":"https://openalex.org/keywords/kinematics","display_name":"Kinematics","score":0.5420340895652771},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.5312447547912598},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5293158888816833},{"id":"https://openalex.org/keywords/inverse-kinematics","display_name":"Inverse kinematics","score":0.5200259685516357},{"id":"https://openalex.org/keywords/inverse","display_name":"Inverse","score":0.5144815444946289},{"id":"https://openalex.org/keywords/mode","display_name":"Mode (computer interface)","score":0.4816945493221283},{"id":"https://openalex.org/keywords/normal-mode","display_name":"Normal mode","score":0.4637978672981262},{"id":"https://openalex.org/keywords/path","display_name":"Path (computing)","score":0.4342602491378784},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.43050551414489746},{"id":"https://openalex.org/keywords/amplitude","display_name":"Amplitude","score":0.4224855601787567},{"id":"https://openalex.org/keywords/robot","display_name":"Robot","score":0.4168534576892853},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3693113327026367},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.3267214894294739},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2994793653488159},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.2512269914150238},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1864558756351471},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.184999018907547},{"id":"https://openalex.org/keywords/classical-mechanics","display_name":"Classical mechanics","score":0.14497405290603638}],"concepts":[{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.590272068977356},{"id":"https://openalex.org/C39920418","wikidata":"https://www.wikidata.org/wiki/Q11476","display_name":"Kinematics","level":2,"score":0.5420340895652771},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.5312447547912598},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5293158888816833},{"id":"https://openalex.org/C17816587","wikidata":"https://www.wikidata.org/wiki/Q1501872","display_name":"Inverse kinematics","level":3,"score":0.5200259685516357},{"id":"https://openalex.org/C207467116","wikidata":"https://www.wikidata.org/wiki/Q4385666","display_name":"Inverse","level":2,"score":0.5144815444946289},{"id":"https://openalex.org/C48677424","wikidata":"https://www.wikidata.org/wiki/Q6888088","display_name":"Mode (computer interface)","level":2,"score":0.4816945493221283},{"id":"https://openalex.org/C32758168","wikidata":"https://www.wikidata.org/wiki/Q900488","display_name":"Normal mode","level":3,"score":0.4637978672981262},{"id":"https://openalex.org/C2777735758","wikidata":"https://www.wikidata.org/wiki/Q817765","display_name":"Path (computing)","level":2,"score":0.4342602491378784},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.43050551414489746},{"id":"https://openalex.org/C180205008","wikidata":"https://www.wikidata.org/wiki/Q159190","display_name":"Amplitude","level":2,"score":0.4224855601787567},{"id":"https://openalex.org/C90509273","wikidata":"https://www.wikidata.org/wiki/Q11012","display_name":"Robot","level":2,"score":0.4168534576892853},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3693113327026367},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.3267214894294739},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2994793653488159},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.2512269914150238},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1864558756351471},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.184999018907547},{"id":"https://openalex.org/C74650414","wikidata":"https://www.wikidata.org/wiki/Q11397","display_name":"Classical mechanics","level":1,"score":0.14497405290603638},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C198394728","wikidata":"https://www.wikidata.org/wiki/Q3695508","display_name":"Vibration","level":2,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/bibmw.2012.6470359","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibmw.2012.6470359","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops","raw_type":"proceedings-article"},{"id":"pmh:oai:HAL:hal-01981799v1","is_oa":false,"landing_page_url":"https://laas.hal.science/hal-01981799","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE International Conference on Bioinformatics and Biomedicine Workshops, Oct 2012, Philadelphia, United States. pp.40-47, &#x27E8;10.1109/BIBMW.2012.6470359&#x27E9;","raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.800000011920929,"display_name":"Sustainable cities and communities","id":"https://metadata.un.org/sdg/11"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":44,"referenced_works":["https://openalex.org/W195962280","https://openalex.org/W203363010","https://openalex.org/W1560270123","https://openalex.org/W1968407616","https://openalex.org/W1969548780","https://openalex.org/W1979348555","https://openalex.org/W1981501516","https://openalex.org/W1986614779","https://openalex.org/W1988529738","https://openalex.org/W1989161865","https://openalex.org/W1992899488","https://openalex.org/W2000643286","https://openalex.org/W2001008407","https://openalex.org/W2022592354","https://openalex.org/W2034801091","https://openalex.org/W2041402034","https://openalex.org/W2047544230","https://openalex.org/W2063494716","https://openalex.org/W2063935375","https://openalex.org/W2068128475","https://openalex.org/W2069777230","https://openalex.org/W2075409132","https://openalex.org/W2075460992","https://openalex.org/W2082028745","https://openalex.org/W2086673864","https://openalex.org/W2097294533","https://openalex.org/W2099490136","https://openalex.org/W2101766243","https://openalex.org/W2102449622","https://openalex.org/W2113971181","https://openalex.org/W2113994268","https://openalex.org/W2126162505","https://openalex.org/W2132245907","https://openalex.org/W2137604324","https://openalex.org/W2139257751","https://openalex.org/W2140889378","https://openalex.org/W2141510323","https://openalex.org/W2145485130","https://openalex.org/W2149186423","https://openalex.org/W2149655632","https://openalex.org/W2163829685","https://openalex.org/W2327272638","https://openalex.org/W3104753760","https://openalex.org/W6681494552"],"related_works":["https://openalex.org/W2084494155","https://openalex.org/W2119963650","https://openalex.org/W2972304526","https://openalex.org/W2380210784","https://openalex.org/W2770397302","https://openalex.org/W998473388","https://openalex.org/W2375415610","https://openalex.org/W1996912299","https://openalex.org/W4235013387","https://openalex.org/W2898458249"],"abstract_inverted_index":{"This":[0],"paper":[1],"presents":[2],"a":[3,89,96,101],"method,":[4],"inspired":[5],"by":[6],"robot":[7],"motion":[8],"planning":[9],"algorithms,":[10],"to":[11,23,32,82],"model":[12,41,64,83],"conformational":[13,35,84],"transitions":[14,85],"in":[15,146],"proteins.":[16],"The":[17,58],"capacity":[18,78],"of":[19,26,46,55,61,79,86,92,103,118,131,140],"normal":[20,56],"mode":[21],"analysis":[22],"predict":[24],"directions":[25],"collective":[27],"large-amplitude":[28],"motions":[29],"is":[30,49,69],"exploited":[31],"bias":[33],"the":[34,52,62,66,77,80,108,114,119,132,135,147],"exploration.":[36],"A":[37],"coarse-grained":[38,67],"elastic":[39],"network":[40],"built":[42],"on":[43,95,100,124],"short":[44],"fragments":[45],"three":[47],"residues":[48],"proposed":[50],"for":[51],"rapid":[53],"computation":[54],"modes.":[57],"accurate":[59],"reconstruction":[60],"all-atom":[63],"from":[65],"one":[68],"achieved":[70],"using":[71],"closed-form":[72],"inverse":[73],"kinematics.":[74],"Results":[75],"show":[76,127],"method":[81],"proteins":[87,105],"within":[88],"few":[90],"hours":[91],"computing":[93,109],"time":[94,110],"single":[97],"processor.":[98],"Tests":[99],"set":[102],"ten":[104],"demonstrate":[106],"that":[107,128],"scales":[111],"linearly":[112],"with":[113],"protein":[115,120,142],"size,":[116],"independently":[117],"topology.":[121],"Further":[122],"experiments":[123],"adenylate":[125],"kinase":[126],"main":[129],"features":[130],"transition":[133],"between":[134],"open":[136],"and":[137],"closed":[138],"conformations":[139],"this":[141],"are":[143],"well":[144],"captured":[145],"computed":[148],"path.":[149]},"counts_by_year":[{"year":2013,"cited_by_count":3}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
