{"id":"https://openalex.org/W4396999865","doi":"https://doi.org/10.1109/tcbb.2024.3402220","title":"Bayesian Lookahead Perturbation Policy for Inference of Regulatory Networks","display_name":"Bayesian Lookahead Perturbation Policy for Inference of Regulatory Networks","publication_year":2024,"publication_date":"2024-01-01","ids":{"openalex":"https://openalex.org/W4396999865","doi":"https://doi.org/10.1109/tcbb.2024.3402220","pmid":"https://pubmed.ncbi.nlm.nih.gov/38758625"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2024.3402220","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/tcbb.2024.3402220","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043","2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11474162/pdf/nihms-1995657.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072786399","display_name":"Mohammad Alali","orcid":"https://orcid.org/0000-0002-5458-5273"},"institutions":[{"id":"https://openalex.org/I12912129","display_name":"Northeastern University","ror":"https://ror.org/04t5xt781","country_code":"US","type":"education","lineage":["https://openalex.org/I12912129"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mohammad Alali","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Northeastern University, USA","Department of Electrical and Computer Engineering, Northeastern University, Boston, MA, USA"],"raw_orcid":"https://orcid.org/0000-0002-5458-5273","affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Northeastern University, USA","institution_ids":["https://openalex.org/I12912129"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Northeastern University, Boston, MA, USA","institution_ids":["https://openalex.org/I12912129"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5017741575","display_name":"Mahdi Imani","orcid":"https://orcid.org/0000-0001-9570-9909"},"institutions":[{"id":"https://openalex.org/I12912129","display_name":"Northeastern University","ror":"https://ror.org/04t5xt781","country_code":"US","type":"education","lineage":["https://openalex.org/I12912129"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mahdi Imani","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Northeastern University, USA","Department of Electrical and Computer Engineering, Northeastern University, Boston, MA, USA"],"raw_orcid":"https://orcid.org/0000-0001-9570-9909","affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Northeastern University, USA","institution_ids":["https://openalex.org/I12912129"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Northeastern University, Boston, MA, USA","institution_ids":["https://openalex.org/I12912129"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I12912129"],"apc_list":{"value":2645,"currency":"USD","value_usd":2645},"apc_paid":null,"fwci":2.0708,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.86857385,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":97},"biblio":{"volume":"21","issue":"5","first_page":"1","last_page":"14"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11195","display_name":"Simulation Techniques and Applications","score":0.5713000297546387,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11195","display_name":"Simulation Techniques and Applications","score":0.5713000297546387,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11031","display_name":"Game Theory and Applications","score":0.5210000276565552,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.723763644695282},{"id":"https://openalex.org/keywords/bayesian-network","display_name":"Bayesian network","score":0.5555972456932068},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.523147702217102},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5098604559898376},{"id":"https://openalex.org/keywords/bayesian-inference","display_name":"Bayesian inference","score":0.47259101271629333},{"id":"https://openalex.org/keywords/frequentist-inference","display_name":"Frequentist inference","score":0.43828293681144714},{"id":"https://openalex.org/keywords/econometrics","display_name":"Econometrics","score":0.37448638677597046},{"id":"https://openalex.org/keywords/mathematical-economics","display_name":"Mathematical economics","score":0.34411364793777466},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.32154759764671326},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.28570854663848877}],"concepts":[{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.723763644695282},{"id":"https://openalex.org/C33724603","wikidata":"https://www.wikidata.org/wiki/Q812540","display_name":"Bayesian network","level":2,"score":0.5555972456932068},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.523147702217102},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5098604559898376},{"id":"https://openalex.org/C160234255","wikidata":"https://www.wikidata.org/wiki/Q812535","display_name":"Bayesian inference","level":3,"score":0.47259101271629333},{"id":"https://openalex.org/C162376815","wikidata":"https://www.wikidata.org/wiki/Q2158281","display_name":"Frequentist inference","level":4,"score":0.43828293681144714},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.37448638677597046},{"id":"https://openalex.org/C144237770","wikidata":"https://www.wikidata.org/wiki/Q747534","display_name":"Mathematical economics","level":1,"score":0.34411364793777466},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.32154759764671326},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.28570854663848877}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1109/tcbb.2024.3402220","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/tcbb.2024.3402220","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043","2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38758625","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38758625","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11474162","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11474162/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11474162/pdf/nihms-1995657.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE/ACM Trans Comput Biol Bioinform","raw_type":"Text"},{"id":"pmh:oai:europepmc.org:11311947","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11474162","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:11474162","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11474162/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11474162/pdf/nihms-1995657.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE/ACM Trans Comput Biol Bioinform","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2289997902","display_name":"III: Small: Statistical Inference through Data-Collection and Expert-Knowledge Incorporation","funder_award_id":"2311969","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3447059689","display_name":null,"funder_award_id":"R21 EB032480","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"},{"id":"https://openalex.org/G4006980019","display_name":"Bayesian Dynamical Modeling of Microbial Communities","funder_award_id":"1r21eb032480-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4874700971","display_name":null,"funder_award_id":"W911NF2110299","funder_id":"https://openalex.org/F4320338281","funder_display_name":"Army Research Office"},{"id":"https://openalex.org/G5902281787","display_name":null,"funder_award_id":"W911NF2110299","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8616422515","display_name":"CRII: III: Informative Bayesian Learning and Data Gathering Through Expert-Acquired Data","funder_award_id":"2202395","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332169","display_name":"Directorate for Computer and Information Science and Engineering","ror":"https://ror.org/025kzpk63"},{"id":"https://openalex.org/F4320337363","display_name":"National Institute of Biomedical Imaging and Bioengineering","ror":"https://ror.org/00372qc85"},{"id":"https://openalex.org/F4320338281","display_name":"Army Research Office","ror":"https://ror.org/05epdh915"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4396999865.pdf","grobid_xml":"https://content.openalex.org/works/W4396999865.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W816410171","https://openalex.org/W1522301498","https://openalex.org/W1937295978","https://openalex.org/W1953702613","https://openalex.org/W1967547048","https://openalex.org/W1971266246","https://openalex.org/W1981991166","https://openalex.org/W2011787460","https://openalex.org/W2055234679","https://openalex.org/W2073793611","https://openalex.org/W2076580309","https://openalex.org/W2104017390","https://openalex.org/W2129651180","https://openalex.org/W2130721915","https://openalex.org/W2132935366","https://openalex.org/W2142901992","https://openalex.org/W2145339207","https://openalex.org/W2175406438","https://openalex.org/W2527751063","https://openalex.org/W2786017183","https://openalex.org/W2944174254","https://openalex.org/W2963722917","https://openalex.org/W2976882512","https://openalex.org/W3066334675","https://openalex.org/W3149930686","https://openalex.org/W3156632562","https://openalex.org/W3169241319","https://openalex.org/W4214535976","https://openalex.org/W4214717370","https://openalex.org/W4242024146","https://openalex.org/W4312058912","https://openalex.org/W4313482696","https://openalex.org/W4385485151","https://openalex.org/W4385485202"],"related_works":["https://openalex.org/W2944091050","https://openalex.org/W2998817056","https://openalex.org/W4221107656","https://openalex.org/W2077878098","https://openalex.org/W4313815718","https://openalex.org/W1506744765","https://openalex.org/W996380913","https://openalex.org/W2024084279","https://openalex.org/W4225555917","https://openalex.org/W2920185967"],"abstract_inverted_index":{"The":[0,192,208],"complexity,":[1],"scale,":[2],"and":[3,12,32,92,110,114,178,227],"uncertainty":[4,19],"in":[5,20,76,173],"regulatory":[6,10,43,90,151],"networks":[7,11,44,91,152],"(e.g.,":[8],"gene":[9],"microbial":[13,229],"networks)":[14],"regularly":[15],"pose":[16],"a":[17,73,99,144,174,180],"huge":[18],"their":[21,115],"models.":[22,68],"These":[23],"uncertainties":[24],"often":[25,45],"cannot":[26,61],"be":[27,62],"entirely":[28],"reduced":[29],"using":[30,221],"limited":[31],"costly":[33],"data":[34,82],"acquired":[35],"from":[36,47,65],"the":[37,48,56,85,94,108,123,128,133,137,155,161,170,196,202,212,222],"normal":[38],"condition":[39],"of":[40,89,102,112,127,157,211],"systems.":[41],"Meanwhile,":[42],"suffer":[46],"non-identifiability":[49,95],"issue,":[50],"which":[51],"refers":[52],"to":[53,83,153,187],"scenarios":[54],"where":[55],"true":[57],"underlying":[58,87],"network":[59,104],"model":[60],"clearly":[63],"distinguished":[64],"other":[66],"possible":[67],"Perturbation":[69],"or":[70],"excitation":[71],"is":[72,165,215],"well-known":[74,223],"process":[75,135,172],"systems":[77],"biology":[78],"for":[79,106,204],"acquiring":[80],"targeted":[81],"reveal":[84],"complex":[86,116],"mechanisms":[88],"overcome":[93],"issue.":[96],"We":[97,142],"consider":[98],"general":[100],"class":[101],"Boolean":[103],"models":[105],"capturing":[107],"activation":[109],"inactivation":[111],"components":[113,126],"interactions.":[117],"Assuming":[118],"partial":[119],"available":[120],"knowledge":[121],"about":[122],"interactions":[124],"between":[125],"networks,":[129],"this":[130],"paper":[131],"formulates":[132],"inference":[134,159],"through":[136,199],"maximum":[138],"aposteriori":[139],"(MAP)":[140],"criterion.":[141],"develop":[143],"Bayesian":[145,190],"lookahead":[146],"policy":[147,186,198],"that":[148],"systematically":[149],"perturbs":[150],"maximize":[154],"performance":[156,210],"MAP":[158],"under":[160],"perturbed":[162],"data.":[163,207],"This":[164],"achieved":[166],"by":[167,217],"optimally":[168],"formulating":[169],"perturbation":[171,185,197],"reinforcement":[175,183],"learning":[176,184],"context":[177],"deriving":[179],"scalable":[181],"deep":[182],"compute":[188],"near-optimal":[189],"policy.":[191],"proposed":[193,213],"method":[194],"learns":[195],"planning":[200],"without":[201],"need":[203],"any":[205],"real":[206],"high":[209],"approach":[214],"demonstrated":[216],"comprehensive":[218],"numerical":[219],"experiments":[220],"mammalian":[224],"cell":[225],"cycle":[226],"gut":[228],"community":[230],"networks.":[231]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":3}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
