{"id":"https://openalex.org/W2901284966","doi":"https://doi.org/10.1186/s12911-018-0665-z","title":"Variant information systems for precision oncology","display_name":"Variant information systems for precision oncology","publication_year":2018,"publication_date":"2018-11-21","ids":{"openalex":"https://openalex.org/W2901284966","doi":"https://doi.org/10.1186/s12911-018-0665-z","mag":"2901284966","pmid":"https://pubmed.ncbi.nlm.nih.gov/30463544"},"language":"en","primary_location":{"id":"doi:10.1186/s12911-018-0665-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-018-0665-z","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-018-0665-z","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-018-0665-z","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037135208","display_name":"Johannes Starlinger","orcid":"https://orcid.org/0000-0003-0832-9604"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Johannes Starlinger","raw_affiliation_strings":["Department of Anesthesiology and Operative Intensive Care Medicine (CCM/CVK), Charit\u00e9 Unviersit\u00e4tsmedizin Berlin, Charit\u00e9platz 1, Berlin, 10117, Germany. starlinger@informatik.hu-berlin.de","Department of Computer Science, Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, Berlin, 10099, Germany. starlinger@informatik.hu-berlin.de","Department of Computer Science, Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, Berlin, 10099, Germany"],"raw_orcid":"https://orcid.org/0000-0003-0832-9604","affiliations":[{"raw_affiliation_string":"Department of Anesthesiology and Operative Intensive Care Medicine (CCM/CVK), Charit\u00e9 Unviersit\u00e4tsmedizin Berlin, Charit\u00e9platz 1, Berlin, 10117, Germany. starlinger@informatik.hu-berlin.de","institution_ids":["https://openalex.org/I7877124"]},{"raw_affiliation_string":"Department of Computer Science, Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, Berlin, 10099, Germany. starlinger@informatik.hu-berlin.de","institution_ids":["https://openalex.org/I39343248"]},{"raw_affiliation_string":"Department of Computer Science, Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, Berlin, 10099, Germany","institution_ids":["https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066897438","display_name":"Steffen Pallarz","orcid":"https://orcid.org/0000-0002-5721-9893"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Steffen Pallarz","raw_affiliation_strings":["Department of Computer Science, Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, Berlin, 10099, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, Berlin, 10099, Germany","institution_ids":["https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013327917","display_name":"Jurica \u0160eva","orcid":"https://orcid.org/0000-0001-7426-0508"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jurica \u0160eva","raw_affiliation_strings":["Department of Computer Science, Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, Berlin, 10099, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, Berlin, 10099, Germany","institution_ids":["https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006079706","display_name":"Damian Rieke","orcid":"https://orcid.org/0000-0003-0027-7977"},"institutions":[{"id":"https://openalex.org/I4210139777","display_name":"Berlin Institute of Health at Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/0493xsw21","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210139777","https://openalex.org/I7877124"]},{"id":"https://openalex.org/I53236636","display_name":"Franklin University","ror":"https://ror.org/00a3sq030","country_code":"US","type":"education","lineage":["https://openalex.org/I53236636"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE","US"],"is_corresponding":false,"raw_author_name":"Damian Rieke","raw_affiliation_strings":["Berlin Institute of Health (BIH), Kapelle-Ufer 2, Berlin, 10117, Germany","Charit\u00e9 Conprehensive Cancer Center, Charit\u00e9 Unviersit\u00e4tsmedizin Berlin, Charit\u00e9platz 1, Berlin, 10117, Germany","Department of Hematology and Medical Oncology, Campus Benjamin Franklin, Charit\u00e9 Unviersit\u00e4tsmedizin Berlin, Hindenburgdamm 30, Berlin, 12203, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Berlin Institute of Health (BIH), Kapelle-Ufer 2, Berlin, 10117, Germany","institution_ids":["https://openalex.org/I4210139777"]},{"raw_affiliation_string":"Charit\u00e9 Conprehensive Cancer Center, Charit\u00e9 Unviersit\u00e4tsmedizin Berlin, Charit\u00e9platz 1, Berlin, 10117, Germany","institution_ids":["https://openalex.org/I7877124"]},{"raw_affiliation_string":"Department of Hematology and Medical Oncology, Campus Benjamin Franklin, Charit\u00e9 Unviersit\u00e4tsmedizin Berlin, Hindenburgdamm 30, Berlin, 12203, Germany","institution_ids":["https://openalex.org/I53236636","https://openalex.org/I7877124"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002711674","display_name":"Christine Sers","orcid":"https://orcid.org/0000-0002-6219-1514"},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Christine Sers","raw_affiliation_strings":["Institute of Pathology Molecular Tumor Pathology, Charit\u00e9 Unviersit\u00e4tsmedizin Berlin, Charit\u00e9platz 1, Berlin, 10117, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Pathology Molecular Tumor Pathology, Charit\u00e9 Unviersit\u00e4tsmedizin Berlin, Charit\u00e9platz 1, Berlin, 10117, Germany","institution_ids":["https://openalex.org/I7877124"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066640097","display_name":"Ulrich Keilholz","orcid":"https://orcid.org/0000-0001-6773-9406"},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ulrich Keilholz","raw_affiliation_strings":["Charit\u00e9 Conprehensive Cancer Center, Charit\u00e9 Unviersit\u00e4tsmedizin Berlin, Charit\u00e9platz 1, Berlin, 10117, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9 Conprehensive Cancer Center, Charit\u00e9 Unviersit\u00e4tsmedizin Berlin, Charit\u00e9platz 1, Berlin, 10117, Germany","institution_ids":["https://openalex.org/I7877124"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055236937","display_name":"Ulf Leser","orcid":"https://orcid.org/0000-0003-2166-9582"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ulf Leser","raw_affiliation_strings":["Department of Computer Science, Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, Berlin, 10099, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, Berlin, 10099, Germany","institution_ids":["https://openalex.org/I39343248"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5037135208"],"corresponding_institution_ids":["https://openalex.org/I39343248","https://openalex.org/I7877124"],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":1.0353,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.80088223,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"18","issue":"1","first_page":"107","last_page":"107"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.36419999599456787,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.36419999599456787,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.3467000126838684,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.07020000368356705,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6319208741188049},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.6181800365447998},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6085447669029236},{"id":"https://openalex.org/keywords/druggability","display_name":"Druggability","score":0.5539655089378357},{"id":"https://openalex.org/keywords/disparate-system","display_name":"Disparate system","score":0.5105951428413391},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.49088460206985474},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.48480215668678284},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.47598543763160706},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.47176316380500793},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4584195017814636},{"id":"https://openalex.org/keywords/data-quality","display_name":"Data quality","score":0.4384014904499054},{"id":"https://openalex.org/keywords/personalized-medicine","display_name":"Personalized medicine","score":0.42851829528808594},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32965975999832153},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2990574240684509},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.28934091329574585},{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.254181444644928},{"id":"https://openalex.org/keywords/public-health","display_name":"Public health","score":0.22337788343429565},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.12058454751968384}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6319208741188049},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.6181800365447998},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6085447669029236},{"id":"https://openalex.org/C10679952","wikidata":"https://www.wikidata.org/wiki/Q5308937","display_name":"Druggability","level":3,"score":0.5539655089378357},{"id":"https://openalex.org/C19443361","wikidata":"https://www.wikidata.org/wiki/Q5282533","display_name":"Disparate system","level":2,"score":0.5105951428413391},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.49088460206985474},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.48480215668678284},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.47598543763160706},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.47176316380500793},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4584195017814636},{"id":"https://openalex.org/C24756922","wikidata":"https://www.wikidata.org/wiki/Q1757694","display_name":"Data quality","level":3,"score":0.4384014904499054},{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.42851829528808594},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32965975999832153},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2990574240684509},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.28934091329574585},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.254181444644928},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.22337788343429565},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.12058454751968384},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008491","descriptor_name":"Medical Informatics Applications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008491","descriptor_name":"Medical Informatics Applications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008491","descriptor_name":"Medical Informatics Applications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12911-018-0665-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-018-0665-z","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-018-0665-z","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:30463544","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30463544","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:doaj.org/article:e9edcf4759254b2caafa6a3a8c926d79","is_oa":true,"landing_page_url":"https://doaj.org/article/e9edcf4759254b2caafa6a3a8c926d79","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making, Vol 18, Iss 1, Pp 1-19 (2018)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5220601","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6249891","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12911-018-0665-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-018-0665-z","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-018-0665-z","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3809712996","display_name":null,"funder_award_id":"STA1471/1-1","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G7172277350","display_name":null,"funder_award_id":"31L0023A","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320329666","display_name":"Berlin Institute of Health","ror":"https://ror.org/0493xsw21"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2901284966.pdf","grobid_xml":"https://content.openalex.org/works/W2901284966.grobid-xml"},"referenced_works_count":63,"referenced_works":["https://openalex.org/W43368958","https://openalex.org/W1515356406","https://openalex.org/W1846586690","https://openalex.org/W1968766436","https://openalex.org/W1971676632","https://openalex.org/W1980740976","https://openalex.org/W2026455681","https://openalex.org/W2029715456","https://openalex.org/W2059145105","https://openalex.org/W2076724084","https://openalex.org/W2095893999","https://openalex.org/W2101071606","https://openalex.org/W2107580398","https://openalex.org/W2107903949","https://openalex.org/W2110430166","https://openalex.org/W2111619115","https://openalex.org/W2118151336","https://openalex.org/W2120736575","https://openalex.org/W2121520198","https://openalex.org/W2121671360","https://openalex.org/W2127832858","https://openalex.org/W2129415103","https://openalex.org/W2131581981","https://openalex.org/W2132230893","https://openalex.org/W2136410628","https://openalex.org/W2137052779","https://openalex.org/W2147714160","https://openalex.org/W2152061559","https://openalex.org/W2158485828","https://openalex.org/W2159092541","https://openalex.org/W2159482845","https://openalex.org/W2159583324","https://openalex.org/W2161062388","https://openalex.org/W2164394614","https://openalex.org/W2166481247","https://openalex.org/W2167179525","https://openalex.org/W2168693035","https://openalex.org/W2171777347","https://openalex.org/W2174602966","https://openalex.org/W2218920572","https://openalex.org/W2256016639","https://openalex.org/W2309021002","https://openalex.org/W2320983896","https://openalex.org/W2363136522","https://openalex.org/W2404369708","https://openalex.org/W2513812716","https://openalex.org/W2548007551","https://openalex.org/W2566723262","https://openalex.org/W2578727015","https://openalex.org/W2583911935","https://openalex.org/W2614443510","https://openalex.org/W2737691789","https://openalex.org/W2765811161","https://openalex.org/W2885727518","https://openalex.org/W2915667579","https://openalex.org/W2951279857","https://openalex.org/W4211054902","https://openalex.org/W4213060373","https://openalex.org/W4234157358","https://openalex.org/W4239818044","https://openalex.org/W4252232449","https://openalex.org/W4294216483","https://openalex.org/W4385213661"],"related_works":["https://openalex.org/W3082935376","https://openalex.org/W4322484660","https://openalex.org/W4386960999","https://openalex.org/W2899657781","https://openalex.org/W2770866531","https://openalex.org/W3193951088","https://openalex.org/W4388011470","https://openalex.org/W4230423494","https://openalex.org/W4298001029","https://openalex.org/W4383105306"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,302],"decreasing":[2],"cost":[3],"of":[4,8,15,90,132,146,169,173,188,209,232,242,290,304,308,330],"obtaining":[5],"high-quality":[6],"calls":[7],"genomic":[9,77,348],"variants":[10,21,78],"and":[11,35,43,53,95,113,149,162,171,180,214,240,274,283,326],"the":[12,58,82,128,143,238,319,327],"increasing":[13],"availability":[14],"clinically":[16],"relevant":[17,264],"data":[18,84,98,119,197,212,217,223,254,259,281,297,311,315,322],"on":[19,76,177],"such":[20,73,118],"are":[22,235,339],"important":[23,130,341],"drivers":[24],"for":[25,48,151,199,265,278,298,306,347],"personalized":[26],"oncology.":[27],"To":[28,100],"allow":[29],"rational":[30],"genome-based":[31],"decisions":[32],"in":[33,51,158,312],"diagnosis":[34,170],"treatment,":[36],"clinicians":[37,103],"need":[38],"intuitive":[39],"access":[40],"to":[41,62,184,220,237,256,332,336],"up-to-date":[42],"comprehensive":[44,74,334],"variant":[45,147,200,211,267,280,296,309,344],"information,":[46],"encompassing,":[47],"instance,":[49],"prevalence":[50],"populations":[52],"diseases,":[54],"functional":[55],"impact":[56],"at":[57],"molecular":[59,178],"level,":[60],"associations":[61],"druggable":[63],"targets,":[64],"or":[65],"results":[66],"from":[67,117,138,261],"clinical":[68,153,167,266],"trials.":[69],"In":[70,203,247],"practice,":[71],"collecting":[72],"information":[75,148,163,335,345],"is":[79,85],"difficult":[80],"since":[81],"underlying":[83],"dispersed":[86],"over":[87],"a":[88,134,186,195,207,216,225,230,243,252,271,288],"multitude":[89],"distributed,":[91],"heterogeneous,":[92],"sometimes":[93],"conflicting,":[94],"quickly":[96],"evolving":[97],"sources.":[99],"work":[101],"efficiently,":[102],"require":[104],"powerful":[105],"Variant":[106],"Information":[107],"Systems":[108],"(VIS)":[109],"which":[110,192],"automatically":[111],"collect":[112],"aggregate":[114],"available":[115],"evidences":[116],"sources":[120],"without":[121],"suppressing":[122],"existing":[123],"uncertainty.":[124],"METHODS:":[125],"We":[126,136,228],"address":[127],"most":[129],"cornerstones":[131],"modeling":[133],"VIS:":[135],"take":[137],"emerging":[139],"community":[140],"standards":[141],"regarding":[142,287],"necessary":[144],"breadth":[145],"procedures":[150],"their":[152,222],"assessment,":[154],"long":[155],"standing":[156],"experience":[157],"implementing":[159],"biomedical":[160],"databases":[161,263],"systems,":[164],"our":[165],"own":[166],"record":[168],"treatment":[172],"cancer":[174],"patients":[175],"based":[176],"profiles,":[179],"extensive":[181],"literature":[182],"review":[183],"derive":[185],"set":[187],"design":[189,239],"principles":[190],"along":[191],"we":[193,205,249],"develop":[194],"relational":[196,253,321],"model":[198,255,323],"level":[201,310],"data.":[202],"addition,":[204],"characterize":[206],"number":[208,231,289],"public":[210,262,279],"sources,":[213,282],"describe":[215],"integration":[218,276],"pipeline":[219,277],"integrate":[221],"into":[224],"VIS.":[226,246],"RESULTS:":[227],"provide":[229],"contributions":[233],"that":[234],"fundamental":[236],"implementation":[241],"comprehensive,":[244],"operational":[245,314],"particular,":[248],"(a)":[250],"present":[251],"accurately":[257],"reflect":[258],"extracted":[260],"interpretation,":[268],"(b)":[269],"introduce":[270],"fault":[272],"tolerant":[273],"performant":[275],"(c)":[284],"offer":[285],"recommendations":[286],"intricate":[291],"challenges":[292],"encountered":[293],"when":[294],"integrating":[295],"clincal":[299],"interpretation.":[300],"CONCLUSION:":[301],"analysis":[303],"requirements":[305],"representation":[307],"an":[313,340],"model,":[316],"together":[317],"with":[318],"implementation-ready":[320],"presented":[324],"here,":[325],"instructional":[328],"description":[329],"methods":[331],"acquire":[333],"fill":[337],"it,":[338],"step":[342],"towards":[343],"systems":[346],"medicine.":[349]},"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
