Package: phantasusLite
Type: Package
Title: Loading and annotation RNA-seq counts matrices
Version: 1.2.0
Authors@R: c(person("Rita", "Sablina", role = "aut"),        
             person("Maxim", "Kleverov", role = "aut"),        
             person("Alexey", "Sergushichev", email = "alsergbox@gmail.com", role = c("aut", "cre")))
Description: PhantasusLite – a lightweight package with helper functions of general interest 
    extracted from phantasus package. In parituclar it simplifies working with public
    RNA-seq datasets from GEO by providing access to the remote
    HSDS repository with the precomputed gene counts from ARCHS4 and DEE2 projects.
Depends: R (>= 4.2)
Imports: data.table, rhdf5client(>= 1.25.1), httr, stringr, stats,
        utils, Biobase, methods
biocViews: GeneExpression, Transcriptomics, RNASeq
License: MIT + file LICENSE
Encoding: UTF-8
RoxygenNote: 7.3.1
Suggests: testthat (>= 3.0.0), knitr, rmarkdown, BiocStyle, rhdf5,
        GEOquery
VignetteBuilder: knitr
Config/testthat/edition: 3
URL: https://github.com/ctlab/phantasusLite/
BugReports: https://github.com/ctlab/phantasusLite/issues
git_url: https://git.bioconductor.org/packages/phantasusLite
git_branch: RELEASE_3_19
git_last_commit: c542b29
git_last_commit_date: 2024-04-30
Repository: Bioconductor 3.19
Date/Publication: 2024-05-01
NeedsCompilation: no
Packaged: 2024-05-02 00:57:39 UTC; biocbuild
Author: Rita Sablina [aut],
  Maxim Kleverov [aut],
  Alexey Sergushichev [aut, cre]
Maintainer: Alexey Sergushichev <alsergbox@gmail.com>
Built: R 4.4.0; ; 2024-05-02 13:16:26 UTC; windows
