git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/FGNet@96135 bc3139a8-67e5-0310-9ffc-ced21a209358
Sara Aibar authored on 29/10/2014 09:57:04
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@@ -2,7 +2,7 @@ Package: FGNet |
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Type: Package |
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Title: Functional Gene Networks derived from biological enrichment analyses |
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Description: Build and visualize functional gene and term networks from clustering of enrichment analyses in multiple annotation spaces. The package includes a graphical user interface (GUI) and functions to perform the functional enrichment analysis through DAVID, GeneTerm Linker, gage (GSEA) and topGO. |
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-Version: 3.1.6 |
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+Version: 3.1.7 |
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Date: 2014-10-22 |
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Author: Sara Aibar, Celia Fontanillo, Conrad Droste and Javier De Las Rivas. |
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Maintainer: Sara Aibar <[email protected]> |
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@@ -60,7 +60,7 @@ FGNet_report <- function (feaResults, geneExpr=NULL, plotExpression="border", on |
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setwd(folder) |
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tryCatch({
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- htmlFileName <- paste("..", .Platform$file.sep, jobName, ".html", sep="") ## Windows??
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+ htmlFileName <- paste(currWD, .Platform$file.sep, jobName, ".html", sep="") |
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createHtml(htmlFileName=htmlFileName, feaResults=feaResults, jobName=jobName, tablesGenes=tablesGenes, tablesTerms=tablesTerms, # Data |
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tool=tool, queryArgs=queryArgs, # Query info |
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filterAttribute=filterAttribute, filterOperator=filterOperator, filterThreshold=filterThreshold, # Filter info |