Multiple-mouse magnetic resonance imaging with cryogenic radiofrequency probes for evaluation of brain development.

R. Mark Henkelman

A. Arbabi Leigh Spencer Noakes Dulcie A. Vousden J. Dazai Shoshana Spring O. Botelho T. Keshavarzian M. Mattingly Jacob Ellegood L. M. J. Nutter R. Wissmann John G. Sled Jason P. Lerch R. Mark Henkelman Brian J. Nieman Multiple-mouse magnetic resonance imaging with cryogenic radiofrequency probes for evaluation of brain development. 119008 2022 252 NeuroImage https://doi.org/10.1016/j.neuroimage.2022.119008 db/journals/neuroimage/neuroimage252.html#ArbabiNVDSBKMEN22

Darren J. Fernandes Jacob Ellegood Rand Askalan Randy D. Blakely Emanuel Dicicco-Bloom Sean E. Egan Lucy R. Osborne Craig M. Powell Armin Raznahan Diane M. Robins Michael W. Salter Ameet S. Sengar Jeremy Veenstra-VanderWeele R. Mark Henkelman Jason P. Lerch Spatial gene expression analysis of neuroanatomical differences in mouse models. 220-230 2017 163 NeuroImage https://doi.org/10.1016/j.neuroimage.2017.08.065 https://www.wikidata.org/entity/Q47275939 db/journals/neuroimage/neuroimage163.html#FernandesEABDEO17

Joanes Grandjean Rebecca Derungs Luka Kulic Tobias Welt R. Mark Henkelman Roger M. Nitsch Markus Rudin Complex interplay between brain function and structure during cerebral amyloidosis in APP transgenic mouse strains revealed by multi-parametric MRI comparison. 1-11 2016 134 NeuroImage https://doi.org/10.1016/j.neuroimage.2016.03.042 https://www.wikidata.org/entity/Q51403503 db/journals/neuroimage/neuroimage134.html#GrandjeanDKWHNR16

Jan Scholz Christine L. Laliberté Matthijs C. van Eede Jason P. Lerch R. Mark Henkelman Variability of brain anatomy for three common mouse strains. 656-662 2016 142 NeuroImage https://doi.org/10.1016/j.neuroimage.2016.03.069 https://www.wikidata.org/entity/Q50523065 db/journals/neuroimage/neuroimage142.html#ScholzLELH16

Jacob Ellegood Brooke A. Babineau R. Mark Henkelman Jason P. Lerch Jacqueline N. Crawley Neuroanatomical analysis of the BTBR mouse model of autism using magnetic resonance imaging and diffusion tensor imaging. 288-300 2013 70 NeuroImage https://doi.org/10.1016/j.neuroimage.2012.12.029 https://www.wikidata.org/entity/Q30537523 db/journals/neuroimage/neuroimage70.html#EllegoodBHLC13

Matthijs C. van Eede Jan Scholz M. Mallar Chakravarty R. Mark Henkelman Jason P. Lerch Mapping registration sensitivity in MR mouse brain images. 226-236 2013 82 NeuroImage https://doi.org/10.1016/j.neuroimage.2013.06.004 https://www.wikidata.org/entity/Q51203708 db/journals/neuroimage/neuroimage82.html#EedeSCHL13

Jason P. Lerch Lisa Gazdzinski Jürgen Germann John G. Sled R. Mark Henkelman Brian J. Nieman Wanted dead or alive? The tradeoff between in-vivo versus ex-vivo MR brain imaging in the mouse. 2012 6 Frontiers Neuroinformatics https://doi.org/10.3389/fninf.2012.00006 https://www.wikidata.org/entity/Q42224781 db/journals/fini/fini6.html#LerchGGSHN12 6

Lindsay S. Cahill Christine L. Laliberté Jacob Ellegood Shoshana Spring Jacqueline A. Gleave Matthijs C. van Eede Jason P. Lerch R. Mark Henkelman Preparation of fixed mouse brains for MRI. 933-939 2012 60 NeuroImage 2 https://doi.org/10.1016/j.neuroimage.2012.01.100 https://www.wikidata.org/entity/Q45057548 db/journals/neuroimage/neuroimage60.html#CahillLESGELH12

Leila Baghdadi Mojdeh Zamyadi John G. Sled Jürgen E. Schneider Shuomo Bhattacharya R. Mark Henkelman Jason P. Lerch Semi-Automatic Segmentation of Multiple Mouse Embryos in MR Images. 237 2011 12 BMC Bioinform. https://doi.org/10.1186/1471-2105-12-237 https://www.wikidata.org/entity/Q33934540 db/journals/bmcbi/bmcbi12.html#BaghdadiZSSBHL11

Jason P. Lerch Adelaide P. Yiu Alonso Martinez-Canabal Tetyana Pekar Veronique D. Bohbot Paul W. Frankland R. Mark Henkelman Sheena A. Josselyn John G. Sled Maze training in mice induces MRI-detectable brain shape changes specific to the type of learning. 2086-2095 2011 54 NeuroImage 3 https://doi.org/10.1016/j.neuroimage.2010.09.086 https://www.wikidata.org/entity/Q33713529 db/journals/neuroimage/neuroimage54.html#LerchYMPBFHJS11

Shoshana Spring Jason P. Lerch Monica K. Wetzel Alan C. Evans R. Mark Henkelman Cerebral asymmetries in 12-week-old C57Bl/6J mice measured by magnetic resonance imaging. 409-415 2010 50 NeuroImage 2 https://doi.org/10.1016/j.neuroimage.2009.12.043 https://www.wikidata.org/entity/Q48372614 db/journals/neuroimage/neuroimage50.html#SpringLWEH10

Jacob Ellegood Laura K. Pacey David R. Hampson Jason P. Lerch R. Mark Henkelman Anatomical phenotyping in a mouse model of fragile X syndrome with magnetic resonance imaging. 1023-1029 2010 53 NeuroImage 3 https://doi.org/10.1016/j.neuroimage.2010.03.038 https://www.wikidata.org/entity/Q39890192 db/journals/neuroimage/neuroimage53.html#EllegoodPHLH10

X. Josette Chen Satheesh Maheswaran Daniel Rueckert R. Mark Henkelman Image registration of whole-body mouse MRI. 1063-1064 2010 ISBI https://doi.org/10.1109/ISBI.2010.5490174 conf/isbi/2010 db/conf/isbi/isbi2010.html#ChenMRH10 Artem Khmelinskii Martin Baiker X. Josette Chen Johan H. C. Reiber R. Mark Henkelman Boudewijn P. F. Lelieveldt Atlas-based organ & bone approximation for ex-vivo µMRI mouse data: a pilot study. 1197-1200 2010 ISBI https://doi.org/10.1109/ISBI.2010.5490209 https://www.wikidata.org/entity/Q57565765 conf/isbi/2010 db/conf/isbi/isbi2010.html#KhmelinskiiBCRHL10

Brige P. Chugh Jason P. Lerch Lisa X. Yu Martin Pienkowski Robert V. Harrison R. Mark Henkelman John G. Sled Measurement of cerebral blood volume in mouse brain regions using micro-computed tomography. 1312-1318 2009 47 NeuroImage 4 https://doi.org/10.1016/j.neuroimage.2009.03.083 https://www.wikidata.org/entity/Q48663323 db/journals/neuroimage/neuroimage47.html#ChughLYPHHS09

Jason P. Lerch Jeffrey B. Carroll Shoshana Spring Lisa N. Bertram Claudia Schwab Michael R. Hayden R. Mark Henkelman Automated deformation analysis in the YAC128 Huntington disease mouse model. 32-39 2008 39 NeuroImage 1 https://doi.org/10.1016/j.neuroimage.2007.08.033 https://www.wikidata.org/entity/Q45306720 db/journals/neuroimage/neuroimage39.html#LerchCSBSHH08

Jason P. Lerch Jeffrey B. Carroll Adrienne Dorr Shoshana Spring Alan C. Evans Michael R. Hayden John G. Sled R. Mark Henkelman Cortical thickness measured from MRI in the YAC128 mouse model of Huntington's disease. 243-251 2008 41 NeuroImage 2 https://doi.org/10.1016/j.neuroimage.2008.02.019 https://www.wikidata.org/entity/Q45289200 db/journals/neuroimage/neuroimage41.html#LerchCDSEHSH08

Jonathan C. Lau Jason P. Lerch John G. Sled R. Mark Henkelman Alan C. Evans Barry J. Bedell Longitudinal neuroanatomical changes determined by deformation-based morphometry in a mouse model of Alzheimer's disease. 19-27 2008 42 NeuroImage 1 https://doi.org/10.1016/j.neuroimage.2008.04.252 https://www.wikidata.org/entity/Q51954263 db/journals/neuroimage/neuroimage42.html#LauLSHEB08

A. E. Dorr Jason P. Lerch Shoshana Spring Noor Jehan Kabani R. Mark Henkelman High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice. 60-69 2008 42 NeuroImage 1 https://doi.org/10.1016/j.neuroimage.2008.03.037 https://www.wikidata.org/entity/Q38456259 db/journals/neuroimage/neuroimage42.html#DorrLSKH08

Shoshana Spring Jason P. Lerch R. Mark Henkelman Sexual dimorphism revealed in the structure of the mouse brain using three-dimensional magnetic resonance imaging. 1424-1433 2007 35 NeuroImage 4 https://doi.org/10.1016/j.neuroimage.2007.02.023 https://www.wikidata.org/entity/Q48217237 db/journals/neuroimage/neuroimage35.html#SpringLH07

X. Josette Chen Natasa Kovacevic Nancy J. Lobaugh John G. Sled R. Mark Henkelman Jeff Henderson Neuroanatomical differences between mouse strains as shown by high-resolution 3D MRI. 99-105 2006 29 NeuroImage 1 https://doi.org/10.1016/j.neuroimage.2005.07.008 https://www.wikidata.org/entity/Q81016291 db/journals/neuroimage/neuroimage29.html#ChenKLSHH06

Natasa Kovacevic X. Josette Chen John G. Sled Jeff Henderson R. Mark Henkelman Deformation Based Representation of Groupwise Average and Variability. 615-622 https://doi.org/10.1007/978-3-540-30135-6_75 2004 conf/miccai/2004-1 MICCAI (1) db/conf/miccai/miccai2004-1.html#KovacevicCSHH04 Natasa Kovacevic Ghassan Hamarneh R. Mark Henkelman Anatomically Guided Registration of Whole Body Mouse MR Images. 870-877 https://doi.org/10.1007/978-3-540-39903-2_106 2003 conf/miccai/2003-2 MICCAI (2) db/conf/miccai/miccai2003-2.html#KovacevicHH03 Ghassan Hamarneh X. Josette Chen Brian Neiman Jeff Henderson R. Mark Henkelman Segmentation, Registration, and Deformation Analysis of 3D MR Images of Mice. 878-885 https://doi.org/10.1007/978-3-540-39903-2_107 2003 conf/miccai/2003-2 MICCAI (2) db/conf/miccai/miccai2003-2.html#HamarnehCNHH03

Greig C. Scott Michael L. G. Joy Robin L. Armstrong R. Mark Henkelman Electromagnetic considerations for RF current density imaging [MRI technique]. 515-524 1995 14 IEEE Trans. Medical Imaging 3 https://doi.org/10.1109/42.414617 https://www.wikidata.org/entity/Q31143637 db/journals/tmi/tmi14.html#ScottJAH95

A. Arbabi Robin L. Armstrong Rand Askalan Brooke A. Babineau Leila Baghdadi Martin Baiker Barry J. Bedell Lisa N. Bertram Shuomo Bhattacharya Randy D. Blakely Veronique D. Bohbot O. Botelho Lindsay S. Cahill Jeffrey B. Carroll M. Mallar Chakravarty X. Josette Chen Brige P. Chugh Jacqueline N. Crawley J. Dazai Rebecca Derungs Emanuel Dicicco-Bloom A. E. Dorr Adrienne Dorr Matthijs C. van Eede Sean E. Egan Jacob Ellegood Alan C. Evans Darren J. Fernandes Paul W. Frankland Lisa Gazdzinski Jürgen Germann Jacqueline A. Gleave Joanes Grandjean Ghassan Hamarneh David R. Hampson Robert V. Harrison Michael R. Hayden Jeff Henderson Sheena A. Josselyn Michael L. G. Joy Noor Jehan Kabani T. Keshavarzian Artem Khmelinskii Natasa Kovacevic Luka Kulic Christine L. Laliberté Jonathan C. Lau Boudewijn P. F. Lelieveldt Jason P. Lerch Nancy J. Lobaugh Satheesh Maheswaran Alonso Martinez-Canabal M. Mattingly Brian Neiman Brian J. Nieman Roger M. Nitsch Leigh Spencer Noakes L. M. J. Nutter Lucy R. Osborne Laura K. Pacey Tetyana Pekar Martin Pienkowski Craig M. Powell Armin Raznahan Johan H. C. Reiber Diane M. Robins Markus Rudin Daniel Rueckert Michael W. Salter Jürgen E. Schneider Jan Scholz Claudia Schwab Greig C. Scott Ameet S. Sengar John G. Sled Shoshana Spring Jeremy Veenstra-VanderWeele Dulcie A. Vousden Tobias Welt Monica K. Wetzel R. Wissmann Adelaide P. Yiu Lisa X. Yu Mojdeh Zamyadi