Corrigendum to "Integration of omics data to generate and analyse COVID-19 specific genome-scale metabolic models" [Comput. Biol. Med. 145 (2022) 105428].

Nikolaj Zimic

Tadeja Rezen Alexandre Martins Miha Mraz Nikolaj Zimic Damjana Rozman Miha Moskon Corrigendum to "Integration of omics data to generate and analyse COVID-19 specific genome-scale metabolic models" [Comput. Biol. Med. 145 (2022) 105428]. 108713 2024 178 Comput. Biol. Medicine https://doi.org/10.1016/j.compbiomed.2024.108713 db/journals/cbm/cbm178.html#RezenMMZRM24 streams/journals/cbm

Miha Moskon Ziga Pusnik Lidija Stanovnik Nikolaj Zimic Miha Mraz A computational design of a programmable biological processor. 104778 2022 221 Biosyst. https://doi.org/10.1016/j.biosystems.2022.104778 https://www.wikidata.org/entity/Q114748711 db/journals/biosystems/biosystems221.html#MoskonPSZM22

Tadeja Rezen Alexandre Martins Miha Mraz Nikolaj Zimic Damjana Rozman Miha Moskon Integration of omics data to generate and analyse COVID-19 specific genome-scale metabolic models. 105428 2022 145 Comput. Biol. Medicine https://doi.org/10.1016/j.compbiomed.2022.105428 db/journals/cbm/cbm145.html#RezenMMZRM22

Miha Moskon Ziga Pusnik Nikolaj Zimic Miha Mraz Field-programmable biological circuits and configurable (bio)logic blocks for distributed biological computing. 104109 2021 128 Comput. Biol. Medicine https://doi.org/10.1016/j.compbiomed.2020.104109 https://www.wikidata.org/entity/Q102320077 db/journals/cbm/cbm128.html#MoskonPZM21

Miha Moskon Roman Komac Nikolaj Zimic Miha Mraz Distributed biological computation: from oscillators, logic gates and switches to a multicellular processor and neural computing applications. 8923-8938 2021 33 Neural Comput. Appl. 15 https://doi.org/10.1007/s00521-021-05711-6 db/journals/nca/nca33.html#MoskonKZM21

Jure Bordon Miha Moskon Nikolaj Zimic Miha Mraz Semi-quantitative Modelling of Gene Regulatory Processes with Unknown Parameter Values Using Fuzzy Logic and Petri Nets. 81-100 2018 160 Fundam. Informaticae 1-2 https://doi.org/10.3233/FI-2018-1675 https://www.wikidata.org/entity/Q129888311 db/journals/fuin/fuin160.html#BordonMZM18

Miha Moskon Nikolaj Zimic Miha Mraz Grohar: Automated Visualization of Genome-Scale Metabolic Models and Their Pathways. 505-508 2018 25 J. Comput. Biol. 5 https://doi.org/10.1089/cmb.2017.0209 https://www.wikidata.org/entity/Q56888545 db/journals/jcb/jcb25.html#MoskonZM18

Ziva Rejc Lidija Magdevska Tilen Trselic Timotej Osolin Rok Vodopivec Jakob Mraz Eva Pavliha Nikolaj Zimic Tanja Cvitanovic Damjana Rozman Miha Moskon Miha Mraz Computational modelling of genome-scale metabolic networks and its application to CHO cell cultures. 150-160 2017 88 Comput. Biol. Medicine https://doi.org/10.1016/j.compbiomed.2017.07.005 https://www.wikidata.org/entity/Q39450749 db/journals/cbm/cbm88.html#RejcMTOVMPZCRMM17

Lidija Magdevska Ziga Pusnik Miha Mraz Nikolaj Zimic Miha Moskon Computational design of synchronous sequential structures in biological systems. 24-31 2017 18 J. Comput. Sci. https://doi.org/10.1016/j.jocs.2016.11.010 db/journals/jocs/jocs18.html#MagdevskaPMZM17

Anastasiia Vasylchenkova Miha Mraz Nikolaj Zimic Miha Moskon Classical Mechanics Approach Applied to Analysis of Genetic Oscillators. 721-727 2017 14 IEEE ACM Trans. Comput. Biol. Bioinform. 3 https://doi.org/10.1109/TCBB.2016.2550456 https://doi.ieeecomputersociety.org/10.1109/TCBB.2016.2550456 https://dl.acm.org/doi/10.1109/TCBB.2016.2550456 https://www.wikidata.org/entity/Q89179630 db/journals/tcbb/tcbb14.html#VasylchenkovaMZ17

Manca Bizjak Nikolaj Zimic Miha Mraz Miha Moskon Computational Framework for Modeling Multiple Noncooperative Transcription Factor Binding and Its Application to the Analysis of Nuclear Factor Kappa B Oscillatory Response. 923-933 2016 23 J. Comput. Biol. 12 https://doi.org/10.1089/cmb.2016.0065 https://www.wikidata.org/entity/Q51693398 db/journals/jcb/jcb23.html#BizjakZMM16

Mattia Petroni Nikolaj Zimic Miha Mraz Miha Moskon Stochastic Simulation Algorithm for Gene Regulatory Networks with Multiple Binding Sites. 218-226 2015 22 J. Comput. Biol. 3 https://doi.org/10.1089/cmb.2014.0064 https://www.wikidata.org/entity/Q42207762 db/journals/jcb/jcb22.html#PetroniZMM15

Jure Bordon Miha Moskon Nikolaj Zimic Miha Mraz Fuzzy Logic as a Computational Tool for Quantitative Modelling of Biological Systems with Uncertain Kinetic Data. 1199-1205 2015 12 IEEE ACM Trans. Comput. Biol. Bioinform. 5 https://doi.org/10.1109/TCBB.2015.2424424 https://doi.ieeecomputersociety.org/10.1109/TCBB.2015.2424424 https://dl.acm.org/doi/10.1109/TCBB.2015.2424424 https://www.wikidata.org/entity/Q31003881 db/journals/tcbb/tcbb12.html#BordonMZM15

Domen Soberl Nikolaj Zimic Ales Leonardis Jaka Krivic Miha Moskon Hardware Implementation of FAST Algorithm for Mobile Applications. 247-256 2015 79 J. Signal Process. Syst. 3 https://doi.org/10.1007/s11265-013-0843-2 db/journals/vlsisp/vlsisp79.html#SoberlZLKM15

Martin Strazar Miha Mraz Nikolaj Zimic Miha Moskon An adaptive genetic algorithm for parameter estimation of biological oscillator models to achieve target quantitative system response. 119-127 2014 13 Nat. Comput. 1 https://doi.org/10.1007/s11047-013-9383-8 db/journals/nc/nc13.html#StrazarMZM14

Primoz Pecar Miha Janez Nikolaj Zimic Miha Mraz Iztok Lebar Bajec The Ternary Quantum-dot Cellular Automata Memorizing Cell. 223-228 2009 ISVLSI https://doi.org/10.1109/ISVLSI.2009.32 https://doi.ieeecomputersociety.org/10.1109/ISVLSI.2009.32 conf/isvlsi/2009 db/conf/isvlsi/isvlsi2009.html#PecarJZMB09 Miha Mraz Zlatko Magdevski Jelena Ficzko Nikolaj Zimic Miha Moskon Miha Janez Iztok Lebar Bajec Towards Multistate Nanocomputing: The Implementation of a Primitive Fuzzy Controller. 45-49 2008 ICQNM https://doi.org/10.1109/ICQNM.2008.12 https://doi.ieeecomputersociety.org/10.1109/ICQNM.2008.12 conf/icqnm/2008 db/conf/icqnm/icqnm2008.html#MrazMFZMJB08

Nikolaj Zimic Miha Mraz Decomposition of a complex fuzzy controller for the truck-and-trailer reverse parking problem. 632-645 2006 43 Math. Comput. Model. 5-6 https://doi.org/10.1016/j.mcm.2005.10.005 db/journals/mcm/mcm43.html#ZimicM06

Miha Mraz Iztok Lebar Bajec Nikolaj Zimic Fuzzy logic used for modelling and simulation of massive processes: A useful tool for nanotechnologies? 274-278 2004 conf/nci/2004 Neural Networks and Computational Intelligence db/conf/nci/nci2004.html#MrazBZ04

Iztok Lebar Bajec Primoz Trunk D. Oseli Nikolaj Zimic Virtual coronary cineangiography. 293-302 2003 33 Comput. Biol. Medicine 3 https://doi.org/10.1016/S0010-4825(02)00095-1 https://www.wikidata.org/entity/Q39648402 db/journals/cbm/cbm33.html#BajecTOZ03

Iztok Lebar Bajec Nikolaj Zimic Miha Mraz Fuzzifying the Thoughts of Animats. 195-202 https://doi.org/10.1007/3-540-44967-1_23 2003 conf/ifsa/2003 IFSA db/conf/ifsa/ifsa2003.html#BajecZM03 Miha Mraz Nikolaj Zimic Iztok Lapanja Iztok Lebar Bajec Fuzzy cellular automata: from theory to applications. 320- 2000 conf/ictai/2000 ICTAI https://doi.org/10.1109/TAI.2000.889889 https://doi.ieeecomputersociety.org/10.1109/TAI.2000.889889 db/conf/ictai/ictai2000.html#MrazZLB00

Jernej Virant Nikolaj Zimic Miha Mraz T-type fuzzy memory cells. 175-183 1999 102 Fuzzy Sets Syst. 2 https://doi.org/10.1016/S0165-0114(97)00099-7 db/journals/fss/fss102.html#VirantZM99

Miha Mraz Nikolaj Zimic Jernej Virant Intelligent bush fire spread prediction using fuzzy cellular automata. 203-207 1999 7 J. Intell. Fuzzy Syst. 2 http://content.iospress.com/articles/journal-of-intelligent-and-fuzzy-systems/ifs082 db/journals/jifs/jifs7.html#MrazZV99

Jernej Virant Nikolaj Zimic Attention to time in fuzzy logic. 39-49 1996 82 Fuzzy Sets Syst. 1 https://doi.org/10.1016/0165-0114(95)00274-X db/journals/fss/fss82.html#VirantZ96

Jernej Virant Nikolaj Zimic Fuzzy automata with fuzzy relief. 69-74 1995 3 IEEE Trans. Fuzzy Syst. 1 https://doi.org/10.1109/91.366572 db/journals/tfs/tfs3.html#VirantZ95

Iztok Lebar Bajec Manca Bizjak Jure Bordon Tanja Cvitanovic Jelena Ficzko Miha Janez Roman Komac Jaka Krivic Iztok Lapanja Ales Leonardis Lidija Magdevska Zlatko Magdevski Alexandre Martins Miha Moskon Jakob Mraz Miha Mraz D. Oseli Timotej Osolin Eva Pavliha Primoz Pecar Mattia Petroni Ziga Pusnik Ziva Rejc Tadeja Rezen Damjana Rozman Domen Soberl Lidija Stanovnik Martin Strazar Tilen Trselic Primoz Trunk Anastasiia Vasylchenkova Jernej Virant Rok Vodopivec