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2020 – today
- 2025
[j5]Mark Chernyshev
, Aron Stålmarck, Martin Corcoran, Gunilla B. Karlsson Hedestam, Ben Murrell:
Detection of PCR chimeras in adaptive immune receptor repertoire sequences. Bioinform. 41(11) (2025)- [i3]Lukas Billera, Hedwig Nora Nordlinder, Jack Collier Ryder, Anton Oresten, Aron Stålmarck, Theodor Mosetti Björk, Ben Murrell:
Branching Flows: Discrete, Continuous, and Manifold Flow Matching with Splits and Deletions. CoRR abs/2511.09465 (2025) - [i2]Lukas Billera, Hedwig Nora Nordlinder, Ben Murrell:
Time dependent loss reweighting for flow matching and diffusion models is theoretically justified. CoRR abs/2511.16599 (2025) - [i1]Markus Ekvall, Ludvig Bergenstråhle, Patrick Truong, Ben Murrell, Joakim Lundeberg:
Generative vector search to improve pathology foundation models across multimodal vision-language tasks. CoRR abs/2512.19360 (2025)
2010 – 2019
- 2018
- [j4]Kemal Eren, Ben Murrell:
RIFRAF: a frame-resolving consensus algorithm. Bioinform. 34(22): 3817-3824 (2018) - [j3]Kemal Eren, Steven Weaver, Robert Ketteringham, Morné Valentyn, Melissa Laird Smith, Venkatesh Kumar, Sanjay Mohan, Sergei L. Kosakovsky Pond, Ben Murrell:
Full-Length Envelope Analyzer (FLEA): A tool for longitudinal analysis of viral amplicons. PLoS Comput. Biol. 14(12) (2018) - 2014
- [j2]N. Lance Hepler, Konrad Scheffler, Steven Weaver, Ben Murrell, Douglas D. Richman, Dennis R. Burton, Pascal Poignard, Davey M. Smith, Sergei L. Kosakovsky Pond:
IDEPI: Rapid Prediction of HIV-1 Antibody Epitopes and Other Phenotypic Features from Sequence Data Using a Flexible Machine Learning Platform. PLoS Comput. Biol. 10(9) (2014) - 2012
- [j1]Ben Murrell, Tulio de Oliveira, Chris Seebregts, Sergei L. Kosakovsky Pond, Konrad Scheffler:
Modeling HIV-1 Drug Resistance as Episodic Directional Selection. PLoS Comput. Biol. 8(5) (2012)
Coauthor Index
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