BibTeX records: Carl Barton

download as .bib file

@article{DBLP:journals/bioinformatics/HeKBTPMH25,
  author       = {Guanchen He and
                  Vasilisa A. Kovaleva and
                  Carl Barton and
                  Paul G. Thomas and
                  Mikhail V. Pogorelyy and
                  Hannah V. Meyer and
                  Qin Huang},
  title        = {Unbiased and error-detecting combinatorial pooling experiments with
                  balanced constant-weight Gray codes for consecutive positives detection},
  journal      = {Bioinform.},
  volume       = {41},
  number       = {12},
  year         = {2025},
  url          = {https://doi.org/10.1093/bioinformatics/btaf611},
  doi          = {10.1093/BIOINFORMATICS/BTAF611},
  timestamp    = {Sun, 01 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/HeKBTPMH25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2502-08214,
  author       = {Guanchen He and
                  Vasilisa A. Kovaleva and
                  Carl Barton and
                  Paul G. Thomas and
                  Mikhail V. Pogorelyy and
                  Hannah V. Meyer and
                  Qin Huang},
  title        = {Unbiased and Error-Detecting Combinatorial Pooling Experiments with
                  Balanced Constant-Weight Gray Codes for Consecutive Positives Detection},
  journal      = {CoRR},
  volume       = {abs/2502.08214},
  year         = {2025},
  url          = {https://doi.org/10.48550/arXiv.2502.08214},
  doi          = {10.48550/ARXIV.2502.08214},
  eprinttype    = {arXiv},
  eprint       = {2502.08214},
  timestamp    = {Wed, 12 Mar 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2502-08214.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sac/WanB24,
  author       = {Cen Wan and
                  Carl Barton},
  editor       = {Jiman Hong and
                  Juw Won Park},
  title        = {A novel hierarchy-based knowledge discovery framework for elucidating
                  human aging-related phenotypic abnormalities},
  booktitle    = {Proceedings of the 39th {ACM/SIGAPP} Symposium on Applied Computing,
                  {SAC} 2024, Avila, Spain, April 8-12, 2024},
  pages        = {515--522},
  publisher    = {{ACM}},
  year         = {2024},
  url          = {https://doi.org/10.1145/3605098.3635943},
  doi          = {10.1145/3605098.3635943},
  timestamp    = {Sun, 19 Jan 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/sac/WanB24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/Barton22,
  author       = {Carl Barton},
  title        = {On the average-case complexity of pattern matching with wildcards},
  journal      = {Theor. Comput. Sci.},
  volume       = {922},
  pages        = {37--45},
  year         = {2022},
  url          = {https://doi.org/10.1016/j.tcs.2022.04.009},
  doi          = {10.1016/J.TCS.2022.04.009},
  timestamp    = {Wed, 27 Jul 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcs/Barton22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/iandc/BartonK0PR20,
  author       = {Carl Barton and
                  Tomasz Kociumaka and
                  Chang Liu and
                  Solon P. Pissis and
                  Jakub Radoszewski},
  title        = {Indexing weighted sequences: Neat and efficient},
  journal      = {Inf. Comput.},
  volume       = {270},
  year         = {2020},
  url          = {https://doi.org/10.1016/j.ic.2019.104462},
  doi          = {10.1016/J.IC.2019.104462},
  timestamp    = {Sun, 06 Oct 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/iandc/BartonK0PR20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/BartonP18,
  author       = {Carl Barton and
                  Solon P. Pissis},
  title        = {Crochemore's Partitioning on Weighted Strings and Applications},
  journal      = {Algorithmica},
  volume       = {80},
  number       = {2},
  pages        = {496--514},
  year         = {2018},
  url          = {https://doi.org/10.1007/s00453-016-0266-0},
  doi          = {10.1007/S00453-016-0266-0},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/algorithmica/BartonP18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijfcs/BartonLP18,
  author       = {Carl Barton and
                  Chang Liu and
                  Solon P. Pissis},
  title        = {Fast Average-Case Pattern Matching on Weighted Sequences},
  journal      = {Int. J. Found. Comput. Sci.},
  volume       = {29},
  number       = {8},
  pages        = {1331--1343},
  year         = {2018},
  url          = {https://doi.org/10.1142/S0129054118430062},
  doi          = {10.1142/S0129054118430062},
  timestamp    = {Sun, 19 Jan 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijfcs/BartonLP18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BartonMOARFEB18,
  author       = {Carl Barton and
                  Sandro Morganella and
                  {\O}yvind {\O}deg{\aa}rd{-}Fougner and
                  Stephanie Alexander and
                  Jonas Ries and
                  Tomas W. Fitzgerald and
                  Jan Ellenberg and
                  Ewan Birney},
  title        = {ChromoTrace: Computational reconstruction of 3D chromosome configurations
                  for super-resolution microscopy},
  journal      = {PLoS Comput. Biol.},
  volume       = {14},
  number       = {3},
  year         = {2018},
  url          = {https://doi.org/10.1371/journal.pcbi.1006002},
  doi          = {10.1371/JOURNAL.PCBI.1006002},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/BartonMOARFEB18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/spire/AyadBCIP18,
  author       = {Lorraine A. K. Ayad and
                  Carl Barton and
                  Panagiotis Charalampopoulos and
                  Costas S. Iliopoulos and
                  Solon P. Pissis},
  editor       = {Travis Gagie and
                  Alistair Moffat and
                  Gonzalo Navarro and
                  Ernesto Cuadros{-}Vargas},
  title        = {Longest Common Prefixes with k-Errors and Applications},
  booktitle    = {String Processing and Information Retrieval - 25th International Symposium,
                  {SPIRE} 2018, Lima, Peru, October 9-11, 2018, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {11147},
  pages        = {27--41},
  publisher    = {Springer},
  year         = {2018},
  url          = {https://doi.org/10.1007/978-3-030-00479-8\_3},
  doi          = {10.1007/978-3-030-00479-8\_3},
  timestamp    = {Wed, 28 Feb 2024 00:16:41 +0100},
  biburl       = {https://dblp.org/rec/conf/spire/AyadBCIP18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mscs/AtharBBGILP17,
  author       = {Tanver Athar and
                  Carl Barton and
                  Widmer Bland and
                  Jia Gao and
                  Costas S. Iliopoulos and
                  Chang Liu and
                  Solon P. Pissis},
  title        = {Fast circular dictionary-matching algorithm},
  journal      = {Math. Struct. Comput. Sci.},
  volume       = {27},
  number       = {2},
  pages        = {143--156},
  year         = {2017},
  url          = {https://doi.org/10.1017/S0960129515000134},
  doi          = {10.1017/S0960129515000134},
  timestamp    = {Sun, 06 Oct 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/mscs/AtharBBGILP17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/prl/AyadBP17,
  author       = {Lorraine A. K. Ayad and
                  Carl Barton and
                  Solon P. Pissis},
  title        = {A faster and more accurate heuristic for cyclic edit distance computation},
  journal      = {Pattern Recognit. Lett.},
  volume       = {88},
  pages        = {81--87},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.patrec.2017.01.018},
  doi          = {10.1016/J.PATREC.2017.01.018},
  timestamp    = {Sat, 22 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/prl/AyadBP17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/BartonKLPR17,
  author       = {Carl Barton and
                  Tomasz Kociumaka and
                  Chang Liu and
                  Solon P. Pissis and
                  Jakub Radoszewski},
  title        = {Indexing Weighted Sequences: Neat and Efficient},
  journal      = {CoRR},
  volume       = {abs/1704.07625},
  year         = {2017},
  url          = {http://arxiv.org/abs/1704.07625},
  eprinttype    = {arXiv},
  eprint       = {1704.07625},
  timestamp    = {Thu, 31 Oct 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/BartonKLPR17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/BartonLP16,
  author       = {Carl Barton and
                  Chang Liu and
                  Solon P. Pissis},
  title        = {Linear-time computation of prefix table for weighted strings {\&}
                  applications},
  journal      = {Theor. Comput. Sci.},
  volume       = {656},
  pages        = {160--172},
  year         = {2016},
  url          = {https://doi.org/10.1016/j.tcs.2016.04.029},
  doi          = {10.1016/J.TCS.2016.04.029},
  timestamp    = {Sun, 06 Oct 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcs/BartonLP16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cocoa/BartonLP16,
  author       = {Carl Barton and
                  Chang Liu and
                  Solon P. Pissis},
  editor       = {T.{-}H. Hubert Chan and
                  Minming Li and
                  Lusheng Wang},
  title        = {On-Line Pattern Matching on Uncertain Sequences and Applications},
  booktitle    = {Combinatorial Optimization and Applications - 10th International Conference,
                  {COCOA} 2016, Hong Kong, China, December 16-18, 2016, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {10043},
  pages        = {547--562},
  publisher    = {Springer},
  year         = {2016},
  url          = {https://doi.org/10.1007/978-3-319-48749-6\_40},
  doi          = {10.1007/978-3-319-48749-6\_40},
  timestamp    = {Thu, 31 Oct 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/cocoa/BartonLP16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/BartonKPR16,
  author       = {Carl Barton and
                  Tomasz Kociumaka and
                  Solon P. Pissis and
                  Jakub Radoszewski},
  editor       = {Roberto Grossi and
                  Moshe Lewenstein},
  title        = {Efficient Index for Weighted Sequences},
  booktitle    = {27th Annual Symposium on Combinatorial Pattern Matching, {CPM} 2016,
                  Tel Aviv, Israel, June 27-29, 2016},
  series       = {LIPIcs},
  volume       = {54},
  pages        = {4:1--4:13},
  publisher    = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
  year         = {2016},
  url          = {https://doi.org/10.4230/LIPIcs.CPM.2016.4},
  doi          = {10.4230/LIPICS.CPM.2016.4},
  timestamp    = {Fri, 21 Nov 2025 23:44:11 +0100},
  biburl       = {https://dblp.org/rec/conf/cpm/BartonKPR16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/BartonKPR16,
  author       = {Carl Barton and
                  Tomasz Kociumaka and
                  Solon P. Pissis and
                  Jakub Radoszewski},
  title        = {Efficient Index for Weighted Sequences},
  journal      = {CoRR},
  volume       = {abs/1602.01116},
  year         = {2016},
  url          = {http://arxiv.org/abs/1602.01116},
  eprinttype    = {arXiv},
  eprint       = {1602.01116},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/BartonKPR16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/BartonFIP15,
  author       = {Carl Barton and
                  Tom{\'{a}}s Flouri and
                  Costas S. Iliopoulos and
                  Solon P. Pissis},
  title        = {Global and local sequence alignment with a bounded number of gaps},
  journal      = {Theor. Comput. Sci.},
  volume       = {582},
  pages        = {1--16},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.tcs.2015.03.016},
  doi          = {10.1016/J.TCS.2015.03.016},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcs/BartonFIP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cwords/BartonP15,
  author       = {Carl Barton and
                  Solon P. Pissis},
  editor       = {Florin Manea and
                  Dirk Nowotka},
  title        = {Linear-Time Computation of Prefix Table for Weighted Strings},
  booktitle    = {Combinatorics on Words - 10th International Conference, {WORDS} 2015,
                  Kiel, Germany, September 14-17, 2015, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {9304},
  pages        = {73--84},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-23660-5\_7},
  doi          = {10.1007/978-3-319-23660-5\_7},
  timestamp    = {Mon, 03 Mar 2025 21:01:46 +0100},
  biburl       = {https://dblp.org/rec/conf/cwords/BartonP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/lata/BartonIP15,
  author       = {Carl Barton and
                  Costas S. Iliopoulos and
                  Solon P. Pissis},
  editor       = {Adrian{-}Horia Dediu and
                  Enrico Formenti and
                  Carlos Mart{\'{\i}}n{-}Vide and
                  Bianca Truthe},
  title        = {Average-Case Optimal Approximate Circular String Matching},
  booktitle    = {Language and Automata Theory and Applications - 9th International
                  Conference, {LATA} 2015, Nice, France, March 2-6, 2015, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {8977},
  pages        = {85--96},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-15579-1\_6},
  doi          = {10.1007/978-3-319-15579-1\_6},
  timestamp    = {Sun, 01 Feb 2026 13:30:45 +0100},
  biburl       = {https://dblp.org/rec/conf/lata/BartonIP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ppam/BartonHMP15,
  author       = {Carl Barton and
                  Alice H{\'{e}}liou and
                  Laurent Mouchard and
                  Solon P. Pissis},
  editor       = {Roman Wyrzykowski and
                  Ewa Deelman and
                  Jack J. Dongarra and
                  Konrad Karczewski and
                  Jacek Kitowski and
                  Kazimierz Wiatr},
  title        = {Parallelising the Computation of Minimal Absent Words},
  booktitle    = {Parallel Processing and Applied Mathematics - 11th International Conference,
                  {PPAM} 2015, Krakow, Poland, September 6-9, 2015. Revised Selected
                  Papers, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {9574},
  pages        = {243--253},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-32152-3\_23},
  doi          = {10.1007/978-3-319-32152-3\_23},
  timestamp    = {Mon, 16 Sep 2019 15:32:09 +0200},
  biburl       = {https://dblp.org/rec/conf/ppam/BartonHMP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wea/BartonIKPRV15,
  author       = {Carl Barton and
                  Costas S. Iliopoulos and
                  Ritu Kundu and
                  Solon P. Pissis and
                  Ahmad Retha and
                  Fatima Vayani},
  editor       = {Evripidis Bampis},
  title        = {Accurate and Efficient Methods to Improve Multiple Circular Sequence
                  Alignment},
  booktitle    = {Experimental Algorithms - 14th International Symposium, {SEA} 2015,
                  Paris, France, June 29 - July 1, 2015, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {9125},
  pages        = {247--258},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-20086-6\_19},
  doi          = {10.1007/978-3-319-20086-6\_19},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wea/BartonIKPRV15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/BartonLP15,
  author       = {Carl Barton and
                  Chang Liu and
                  Solon P. Pissis},
  title        = {Fast Average-Case Pattern Matching on Weighted Sequences},
  journal      = {CoRR},
  volume       = {abs/1512.01085},
  year         = {2015},
  url          = {http://arxiv.org/abs/1512.01085},
  eprinttype    = {arXiv},
  eprint       = {1512.01085},
  timestamp    = {Thu, 31 Oct 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/BartonLP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/BartonIP14,
  author       = {Carl Barton and
                  Costas S. Iliopoulos and
                  Solon P. Pissis},
  title        = {Fast algorithms for approximate circular string matching},
  journal      = {Algorithms Mol. Biol.},
  volume       = {9},
  pages        = {9},
  year         = {2014},
  url          = {https://doi.org/10.1186/1748-7188-9-9},
  doi          = {10.1186/1748-7188-9-9},
  timestamp    = {Fri, 13 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/almob/BartonIP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/BartonIP14a,
  author       = {Carl Barton and
                  Costas S. Iliopoulos and
                  Solon P. Pissis},
  title        = {Optimal computation of all tandem repeats in a weighted sequence},
  journal      = {Algorithms Mol. Biol.},
  volume       = {9},
  pages        = {21},
  year         = {2014},
  url          = {https://doi.org/10.1186/s13015-014-0021-5},
  doi          = {10.1186/S13015-014-0021-5},
  timestamp    = {Fri, 13 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/almob/BartonIP14a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BartonHMP14,
  author       = {Carl Barton and
                  Alice H{\'{e}}liou and
                  Laurent Mouchard and
                  Solon P. Pissis},
  title        = {Linear-time computation of minimal absent words using suffix array},
  journal      = {{BMC} Bioinform.},
  volume       = {15},
  pages        = {388},
  year         = {2014},
  url          = {https://doi.org/10.1186/s12859-014-0388-9},
  doi          = {10.1186/S12859-014-0388-9},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/BartonHMP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/BartonILMPP14,
  author       = {Carl Barton and
                  Costas S. Iliopoulos and
                  Inbok Lee and
                  Laurent Mouchard and
                  Kunsoo Park and
                  Solon P. Pissis},
  title        = {Extending alignments with k-mismatches and {\(\mathscr{l}\)}-gaps},
  journal      = {Theor. Comput. Sci.},
  volume       = {525},
  pages        = {80--88},
  year         = {2014},
  url          = {https://doi.org/10.1016/j.tcs.2013.06.012},
  doi          = {10.1016/J.TCS.2013.06.012},
  timestamp    = {Wed, 17 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcs/BartonILMPP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icabd/BartonP14,
  author       = {Carl Barton and
                  Solon P. Pissis},
  editor       = {Costas S. Iliopoulos and
                  Alessio Langiu},
  title        = {Optimal Computation of all Repetitions in a Weighted String},
  booktitle    = {Proceedings of the 2nd International Conference on Algorithms for
                  Big Data , Palermo, Italy, April 07-09, 2014},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1146},
  pages        = {9--15},
  publisher    = {CEUR-WS.org},
  year         = {2014},
  url          = {https://ceur-ws.org/Vol-1146/paper3.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:22:36 +0100},
  biburl       = {https://dblp.org/rec/conf/icabd/BartonP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwoca/BartonIPS14,
  author       = {Carl Barton and
                  Costas S. Iliopoulos and
                  Solon P. Pissis and
                  William F. Smyth},
  editor       = {Jan Kratochv{\'{\i}}l and
                  Mirka Miller and
                  Dalibor Froncek},
  title        = {Fast and Simple Computations Using Prefix Tables Under Hamming and
                  Edit Distance},
  booktitle    = {Combinatorial Algorithms - 25th International Workshop, {IWOCA} 2014,
                  Duluth, MN, USA, October 15-17, 2014, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {8986},
  pages        = {49--61},
  publisher    = {Springer},
  year         = {2014},
  url          = {https://doi.org/10.1007/978-3-319-19315-1\_5},
  doi          = {10.1007/978-3-319-19315-1\_5},
  timestamp    = {Tue, 14 May 2019 10:00:53 +0200},
  biburl       = {https://dblp.org/rec/conf/iwoca/BartonIPS14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/BartonIP14,
  author       = {Carl Barton and
                  Costas S. Iliopoulos and
                  Solon P. Pissis},
  title        = {Average-Case Optimal Approximate Circular String Matching},
  journal      = {CoRR},
  volume       = {abs/1406.5480},
  year         = {2014},
  url          = {http://arxiv.org/abs/1406.5480},
  eprinttype    = {arXiv},
  eprint       = {1406.5480},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/BartonIP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/BartonHMP14,
  author       = {Carl Barton and
                  Alice H{\'{e}}liou and
                  Laurent Mouchard and
                  Solon P. Pissis},
  title        = {Linear-time Computation of Minimal Absent Words Using Suffix Array},
  journal      = {CoRR},
  volume       = {abs/1406.6341},
  year         = {2014},
  url          = {http://arxiv.org/abs/1406.6341},
  eprinttype    = {arXiv},
  eprint       = {1406.6341},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/BartonHMP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/BartonI14,
  author       = {Carl Barton and
                  Costas S. Iliopoulos},
  title        = {On the Average-case Complexity of Pattern Matching with Wildcards},
  journal      = {CoRR},
  volume       = {abs/1407.0950},
  year         = {2014},
  url          = {http://arxiv.org/abs/1407.0950},
  eprinttype    = {arXiv},
  eprint       = {1407.0950},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/BartonI14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcbdd/BartonGILMP13,
  author       = {Carl Barton and
                  Mathieu Giraud and
                  Costas S. Iliopoulos and
                  Thierry Lecroq and
                  Laurent Mouchard and
                  Solon P. Pissis},
  title        = {Querying highly similar sequences},
  journal      = {Int. J. Comput. Biol. Drug Des.},
  volume       = {6},
  number       = {1/2},
  pages        = {119--130},
  year         = {2013},
  url          = {https://doi.org/10.1504/IJCBDD.2013.052206},
  doi          = {10.1504/IJCBDD.2013.052206},
  timestamp    = {Sat, 25 Apr 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijcbdd/BartonGILMP13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BartonFIP13,
  author       = {Carl Barton and
                  Tom{\'{a}}s Flouri and
                  Costas S. Iliopoulos and
                  Solon P. Pissis},
  editor       = {Jing Gao},
  title        = {GapsMis: flexible sequence alignment with a bounded number of gaps},
  booktitle    = {{ACM} Conference on Bioinformatics, Computational Biology and Biomedical
                  Informatics. {ACM-BCB} 2013, Washington, DC, USA, September 22-25,
                  2013},
  pages        = {402},
  publisher    = {{ACM}},
  year         = {2013},
  url          = {https://doi.org/10.1145/2506583.2506584},
  doi          = {10.1145/2506583.2506584},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bcb/BartonFIP13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eann/BartonIMW13,
  author       = {Carl Barton and
                  Costas S. Iliopoulos and
                  Nicola J. Mulder and
                  Bruce W. Watson},
  editor       = {Lazaros S. Iliadis and
                  Harris Papadopoulos and
                  Chrisina Jayne},
  title        = {Identification of All Exact and Approximate Inverted Repeats in Regular
                  and Weighted Sequences},
  booktitle    = {Engineering Applications of Neural Networks - 14th International Conference,
                  {EANN} 2013, Halkidiki, Greece, September 13-16, 2013 Proceedings,
                  Part {II}},
  series       = {Communications in Computer and Information Science},
  volume       = {384},
  pages        = {11--19},
  publisher    = {Springer},
  year         = {2013},
  url          = {https://doi.org/10.1007/978-3-642-41016-1\_2},
  doi          = {10.1007/978-3-642-41016-1\_2},
  timestamp    = {Wed, 17 Jul 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/eann/BartonIMW13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/AlatabbiBI12,
  author       = {Ali Alatabbi and
                  Carl Barton and
                  Costas S. Iliopoulos},
  title        = {On the repetitive collection indexing problem},
  booktitle    = {2012 {IEEE} International Conference on Bioinformatics and Biomedicine
                  Workshops, {BIBMW} 2012, Philadelphia, USA, October 4-7, 2012},
  pages        = {682--687},
  publisher    = {{IEEE} Computer Society},
  year         = {2012},
  url          = {https://doi.org/10.1109/BIBMW.2012.6470220},
  doi          = {10.1109/BIBMW.2012.6470220},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/AlatabbiBI12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ifip12/ChangBIJ12,
  author       = {Kaichun K. Chang and
                  Carl Barton and
                  Costas S. Iliopoulos and
                  Jyh{-}Shing Roger Jang},
  editor       = {Lazaros S. Iliadis and
                  Ilias Maglogiannis and
                  Harris Papadopoulos},
  title        = {Conceptualization and Significance Study of a New Appliation {CS-MIR}},
  booktitle    = {Artificial Intelligence Applications and Innovations - 8th {IFIP}
                  {WG} 12.5 International Conference, {AIAI} 2012, Halkidiki, Greece,
                  September 27-30, 2012, Proceedings, Part {I}},
  series       = {{IFIP} Advances in Information and Communication Technology},
  volume       = {381},
  pages        = {146--156},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-33409-2\_16},
  doi          = {10.1007/978-3-642-33409-2\_16},
  timestamp    = {Sun, 02 Jun 2019 21:25:44 +0200},
  biburl       = {https://dblp.org/rec/conf/ifip12/ChangBIJ12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ifip12/BartonCIL12,
  author       = {Carl Barton and
                  Emilios Cambouropoulos and
                  Costas S. Iliopoulos and
                  Zsuzsanna Lipt{\'{a}}k},
  editor       = {Lazaros S. Iliadis and
                  Ilias Maglogiannis and
                  Harris Papadopoulos and
                  Kostas D. Karatzas and
                  Spyros Sioutas},
  title        = {Melodic String Matching via Interval Consolidation and Fragmentation},
  booktitle    = {Artificial Intelligence Applications and Innovations - {AIAI} 2012
                  International Workshops: AIAB, AIeIA, CISE, COPA, IIVC, ISQL, MHDW,
                  and WADTMB, Halkidiki, Greece, September 27-30, 2012, Proceedings,
                  Part {II}},
  series       = {{IFIP} Advances in Information and Communication Technology},
  volume       = {382},
  pages        = {460--469},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-33412-2\_47},
  doi          = {10.1007/978-3-642-33412-2\_47},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ifip12/BartonCIL12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ifip12/AlatabbiBIM12,
  author       = {Ali Alatabbi and
                  Carl Barton and
                  Costas S. Iliopoulos and
                  Laurent Mouchard},
  editor       = {Lazaros S. Iliadis and
                  Ilias Maglogiannis and
                  Harris Papadopoulos and
                  Kostas D. Karatzas and
                  Spyros Sioutas},
  title        = {Querying Highly Similar Structured Sequences via Binary Encoding and
                  Word Level Operations},
  booktitle    = {Artificial Intelligence Applications and Innovations - {AIAI} 2012
                  International Workshops: AIAB, AIeIA, CISE, COPA, IIVC, ISQL, MHDW,
                  and WADTMB, Halkidiki, Greece, September 27-30, 2012, Proceedings,
                  Part {II}},
  series       = {{IFIP} Advances in Information and Communication Technology},
  volume       = {382},
  pages        = {584--592},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-33412-2\_60},
  doi          = {10.1007/978-3-642-33412-2\_60},
  timestamp    = {Tue, 26 Jun 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ifip12/AlatabbiBIM12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}