Weakly-supervised segmentation using inherently-explainable classification models and their application to brain tumour classification.

Florian Dubost

Soumick Chatterjee Hadya Yassin Florian Dubost Andreas Nürnberger Oliver Speck Weakly-supervised segmentation using inherently-explainable classification models and their application to brain tumour classification. 2026 133460 682 Neurocomputing https://doi.org/10.1016/j.neucom.2026.133460 db/journals/ijon/ijon682.html#ChatterjeeYDNS26 streams/journals/ijon

Junze Liu Kun Qian Florian Dubost Kai Zhong Arvind Srinivasan 0009 Nan Chen Anping Wang Sam Zhang Alejandro Mottini Qingjun Cui Tian Wang 3D Primitives are a Spatial Language for VLMs. 2026 May abs/2605.12586 CoRR https://doi.org/10.48550/arXiv.2605.12586 db/journals/corr/corr2605.html#abs-2605-12586 streams/journals/corr

Xingchang Huang Ashish Kumar Singh Florian Dubost Cristina Nader Vasconcelos Sakar Khattar Liang Shi Christian Theobalt A. Cengiz Öztireli Gurprit Singh Restereo: Diffusion stereo video generation and restoration. 2025 June abs/2506.06023 CoRR https://doi.org/10.48550/arXiv.2506.06023 db/journals/corr/corr2506.html#abs-2506-06023 streams/journals/corr

Carole H. Sudre Kimberlin M. H. van Wijnen Florian Dubost Hieab Adams David Atkinson Frederik Barkhof Mahlet A. Birhanu Esther E. Bron Robin Camarasa Nish Chaturvedi Yuan Chen Zihao Chen Shuai Chen Qi Dou 0001 Tavia E. Evans Ivan Ezhov Haojun Gao Marta Gironés-Sangüesa Juan Domingo Gispert Beatriz Gomez Anson Alun D. Hughes Mohammad Arfan Ikram Silvia Ingala Hans Rolf Jäger Florian Kofler Hugo J. Kuijf Denis Kutnar Minho Lee Bo Li 0088 Luigi Lorenzini Bjoern H. Menze José Luis Molinuevo Yiwei Pan Élodie Puybareau Rafael Rehwald Ruisheng Su Pengcheng Shi Lorna Smith Therese Tillin Guillaume Tochon Hélène Urien Bas H. M. van der Velden Isabelle F. van der Velpen Benedikt Wiestler Frank J. Wolters Pinar Yilmaz Marius de Groot Meike W. Vernooij Marleen de Bruijne <i>Where is VALDO?</i> VAscular Lesions Detection and segmentatiOn challenge at MICCAI 2021. 103029 2024 January 91 Medical Image Anal. https://doi.org/10.1016/j.media.2023.103029 db/journals/mia/mia91.html#SudreWDAABBBCCCCCDEEGGGAHIIJKKKLLLM24

Erfan Darzi Florian Dubost Nanna Maria Sijtsema Peter M. A. van Ooijen Exploring Adversarial Attacks in Federated Learning for Medical Imaging. 13591-13599 2024 December 20 IEEE Trans. Ind. Informatics 12 https://doi.org/10.1109/TII.2024.3423457 db/journals/tii/tii20.html#DarziDSO24 streams/journals/tii

Yang Zheng Qingqing Zhao Guandao Yang Wang Yifan 0001 Donglai Xiang Florian Dubost Dmitry Lagun Thabo Beeler Federico Tombari Leonidas J. Guibas Gordon Wetzstein PhysAvatar: Learning the Physics of Dressed 3D Avatars from Visual Observations. 262-284 2024 ECCV (37) https://doi.org/10.1007/978-3-031-72913-3_15 conf/eccv/2024-37 db/conf/eccv/eccv2024-37.html#ZhengZYYXDLBTGW24 streams/conf/eccv Colton Stearns Adam W. Harley Mikaela Angelina Uy Florian Dubost Federico Tombari Gordon Wetzstein Leonidas J. Guibas Dynamic Gaussian Marbles for Novel View Synthesis of Casual Monocular Videos. 30:1-30:11 2024 SIGGRAPH Asia https://doi.org/10.1145/3680528.3687681 conf/siggrapha/2024 db/conf/siggrapha/siggrapha2024.html#StearnsHUDTWG24

Colton Stearns Adam W. Harley Mikaela Angelina Uy Florian Dubost Federico Tombari Gordon Wetzstein Leonidas J. Guibas Dynamic Gaussian Marbles for Novel View Synthesis of Casual Monocular Videos. 2024 abs/2406.18717 CoRR https://doi.org/10.48550/arXiv.2406.18717 db/journals/corr/corr2406.html#abs-2406-18717 streams/journals/corr

Soumick Chatterjee Hendrik Mattern Marc Dörner Alessandro Sciarra Florian Dubost Hannes Schnurre Rupali Khatun Chun-Chih Yu Tsung-Lin Hsieh Yi-Shan Tsai Yi-Zeng Fang Yung-Ching Yang Juinn-Dar Huang Marshall Xu Siyu Liu Fernanda L. Ribeiro Saskia Bollmann Karthikesh Varma Chintalapati Chethan Radhakrishna Sri Chandana Hudukula Ram Kumar Raviteja Sutrave Abdul Qayyum 0002 Moona Mazher Imran Razzak Cristóbal Rodero Steven Niederren Fengming Lin Yan Xia Jiacheng Wang 0002 Riyu Qiu Liansheng Wang 0002 Arya Yazdan Panah Rosana El Jurdi Guanghui Fu Janan Arslan Ghislain Vaillant Romain Valabrègue Didier Dormont Bruno Stankoff Olivier Colliot Luisa Vargas Isai Daniel Chacón Ioannis Pitsiorlas Pablo Arbeláez Maria A. Zuluaga Stefanie Schreiber Oliver Speck Andreas Nürnberger SMILE-UHURA Challenge - Small Vessel Segmentation at Mesoscopic Scale from Ultra-High Resolution 7T Magnetic Resonance Angiograms. 2024 abs/2411.09593 CoRR https://doi.org/10.48550/arXiv.2411.09593 db/journals/corr/corr2411.html#abs-2411-09593 streams/journals/corr

Ali Mirzazadeh Florian Dubost Maxwell Pike Krish Maniar Max Zuo Christopher Lee-Messer Daniel L. Rubin ATCON: Attention Consistency for Vision Models. 1880-1889 2023 WACV https://doi.org/10.1109/WACV56688.2023.00192 conf/wacv/2023 db/conf/wacv/wacv2023.html#MirzazadehDPMZLR23 Florian Dubost Erin Hong Siyi Tang Nandita Bhaskhar Christopher Lee-Messer Daniel L. Rubin Semi-Supervised Learning for Sparsely-Labeled Sequential Data: Application to Healthcare Video Processing. 1890-1899 2023 WACV https://doi.org/10.1109/WACV56688.2023.00193 conf/wacv/2023 db/conf/wacv/wacv2023.html#DubostHTBLR23

Erfan Darzi Florian Dubost Nanna Maria Sijtsema Peter M. A. van Ooijen Exploring adversarial attacks in federated learning for medical imaging. 2023 abs/2310.06227 CoRR https://doi.org/10.48550/arXiv.2310.06227 db/journals/corr/corr2310.html#abs-2310-06227

Erfan Darzi Florian Dubost Nanna Maria Sijtsema Peter M. A. van Ooijen The Hidden Adversarial Vulnerabilities of Medical Federated Learning. 2023 abs/2310.13893 CoRR https://doi.org/10.48550/arXiv.2310.13893 db/journals/corr/corr2310.html#abs-2310-13893

Soumick Chatterjee Kartik Prabhu Mahantesh Pattadkal Gerda Bortsova Chompunuch Sarasaen Florian Dubost Hendrik Mattern Marleen de Bruijne Oliver Speck Andreas Nürnberger DS6, Deformation-Aware Semi-Supervised Learning: Application to Small Vessel Segmentation with Noisy Training Data. 259 2022 8 J. Imaging 10 https://doi.org/10.3390/jimaging8100259 db/journals/jimaging/jimaging8.html#ChatterjeePPBSD22

Shuai Chen Zahra Sedghi Gamechi Florian Dubost Gijs van Tulder Marleen de Bruijne An end-to-end approach to segmentation in medical images with CNN and posterior-CRF. 102311 2022 76 Medical Image Anal. https://doi.org/10.1016/j.media.2021.102311 db/journals/mia/mia76.html#ChenGDTB22

Siyi Tang Jared Dunnmon Khaled Kamal Saab Xuan Zhang Qianying Huang Florian Dubost Daniel L. Rubin Christopher Lee-Messer Self-Supervised Graph Neural Networks for Improved Electroencephalographic Seizure Analysis. 2022 ICLR https://openreview.net/forum?id=k9bx1EfHI_- conf/iclr/2022 db/conf/iclr/iclr2022.html#TangDSZHDRL22

Soumick Chatterjee Hadya Yassin Florian Dubost Andreas Nürnberger Oliver Speck Weakly-supervised segmentation using inherently-explainable classification models and their application to brain tumour classification. 2022 abs/2206.05148 CoRR https://doi.org/10.48550/arXiv.2206.05148 db/journals/corr/corr2206.html#abs-2206-05148

Carole H. Sudre Kimberlin M. H. van Wijnen Florian Dubost Hieab Adams David Atkinson Frederik Barkhof Mahlet A. Birhanu Esther E. Bron Robin Camarasa Nish Chaturvedi Yuan Chen Zihao Chen Shuai Chen Qi Dou 0001 Tavia E. Evans Ivan Ezhov Haojun Gao Marta Gironés-Sangüesa Juan Domingo Gispert Beatriz Gomez Anson Alun D. Hughes Mohammad Arfan Ikram Silvia Ingala Hans Rolf Jäger Florian Kofler Hugo J. Kuijf Denis Kutnar Minho Lee Bo Li 0088 Luigi Lorenzini Bjoern H. Menze José Luis Molinuevo Yiwei Pan Élodie Puybareau Rafael Rehwald Ruisheng Su Pengcheng Shi Lorna Smith Therese Tillin Guillaume Tochon Hélène Urien Bas H. M. van der Velden Isabelle F. van der Velpen Benedikt Wiestler Frank J. Wolters Pinar Yilmaz Marius de Groot Meike W. Vernooij Marleen de Bruijne Where is VALDO? VAscular Lesions Detection and segmentatiOn challenge at MICCAI 2021. 2022 abs/2208.07167 CoRR https://doi.org/10.48550/arXiv.2208.07167 db/journals/corr/corr2208.html#abs-2208-07167

Ali Mirzazadeh Florian Dubost Maxwell Pike Krish Maniar Max Zuo Christopher Lee-Messer Daniel L. Rubin ATCON: Attention Consistency for Vision Models. 2022 abs/2210.09705 CoRR https://doi.org/10.48550/arXiv.2210.09705 db/journals/corr/corr2210.html#abs-2210-09705

Liansheng Wang 0002 Cong Xie Yi Lin Hong-Yu Zhou Kailin Chen Dalong Cheng Florian Dubost Benjamin Collery Bidur Khanal Bishesh Khanal Rong Tao Shangliang Xu Upasana Upadhyay Bharadwaj Zhusi Zhong Jie Li 0001 Shuxin Wang Shuo Li 0001 Evaluation and comparison of accurate automated spinal curvature estimation algorithms with spinal anterior-posterior X-Ray images: The AASCE2019 challenge. 102115 2021 72 Medical Image Anal. https://doi.org/10.1016/j.media.2021.102115 db/journals/mia/mia72.html#WangXLZCCDCKKTX21

Gerda Bortsova Cristina González-Gonzalo Suzanne C. Wetstein Florian Dubost Ioannis Katramados Laurens Hogeweg Bart Liefers Bram van Ginneken Josien P. W. Pluim Mitko Veta Clara I. Sánchez Marleen de Bruijne Adversarial attack vulnerability of medical image analysis systems: Unexplored factors. 102141 2021 73 Medical Image Anal. https://doi.org/10.1016/j.media.2021.102141 db/journals/mia/mia73.html#BortsovaGWDKHLG21

Kimberley M. Timmins Irene C. van der Schaaf Edwin Bennink Ynte M. Ruigrok Xingle An Michael Baumgartner 0001 Pascal Bourdon Riccardo de Feo Tommaso Di Noto Florian Dubost Augusto Fava-Sanches Xue Feng 0001 Corentin Giroud Inteneural Group Minghui Hu 0003 Paul F. Jaeger Juhana Kaiponen Michal Klimont Yuexiang Li Hongwei Li 0004 Yi Lin 0009 Timo Loehr Jun Ma 0016 Klaus H. Maier-Hein Guillaume Marie Bjoern H. Menze Jonas Richiardi Saifeddine Rjiba Dhaval Shah Suprosanna Shit Jussi Tohka Thierry Urruty Urszula Walinska Xiaoping Yang 0001 Yunqiao Yang 0001 Yin Yin Birgitta K. Velthuis Hugo J. Kuijf Comparing methods of detecting and segmenting unruptured intracranial aneurysms on TOF-MRAS: The ADAM challenge. 118216 2021 238 NeuroImage https://doi.org/10.1016/j.neuroimage.2021.118216 db/journals/neuroimage/neuroimage238.html#TimminsSBRABBFN21

Gerda Bortsova Florian Dubost Laurens Hogeweg Ioannis Katramados Marleen de Bruijne Adversarial Heart Attack: Neural Networks Fooled to Segment Heart Symbols in Chest X-Ray Images. 2021 abs/2104.00139 CoRR https://arxiv.org/abs/2104.00139 db/journals/corr/corr2104.html#abs-2104-00139

Siyi Tang Jared A. Dunnmon Khaled Saab 0002 Xuan Zhang Qianying Huang Florian Dubost Daniel L. Rubin Christopher Lee-Messer Automated Seizure Detection and Seizure Type Classification From Electroencephalography With a Graph Neural Network and Self-Supervised Pre-Training. 2021 abs/2104.08336 CoRR https://arxiv.org/abs/2104.08336 db/journals/corr/corr2104.html#abs-2104-08336

Florian Dubost Khaled Kamal Saab Erin Hong Daniel Yang Fu Max Pike Siddharth Sharma Siyi Tang Nandita Bhaskhar Christopher Lee-Messer Daniel L. Rubin Double Descent Optimization Pattern and Aliasing: Caveats of Noisy Labels. 2021 abs/2106.02100 CoRR https://arxiv.org/abs/2106.02100 db/journals/corr/corr2106.html#abs-2106-02100

Gerda Bortsova Daniel Bos Florian Dubost Meike W. Vernooij M. Kamran Ikram Gijs van Tulder Marleen de Bruijne Automated Segmentation and Volume Measurement of Intracranial Carotid Artery Calcification on Non-Contrast CT. 2021 abs/2107.09442 CoRR https://arxiv.org/abs/2107.09442 db/journals/corr/corr2107.html#abs-2107-09442

Siddharth Sharma Florian Dubost Christopher Lee-Messer Daniel L. Rubin Automated Detection of Patients in Hospital Video Recordings. 2021 abs/2111.14270 CoRR https://arxiv.org/abs/2111.14270 db/journals/corr/corr2111.html#abs-2111-14270

Florian Dubost Marleen de Bruijne Marco Nardin Adrian V. Dalca Kathleen L. Donahue Anne-Katrin Giese Mark R. Etherton Ona Wu Marius de Groot Wiro J. Niessen Meike W. Vernooij Natalia S. Rost Markus D. Schirmer Multi-atlas image registration of clinical data with automated quality assessment using ventricle segmentation. 101698 2020 63 Medical Image Anal. https://doi.org/10.1016/j.media.2020.101698 https://www.wikidata.org/entity/Q93260112 db/journals/mia/mia63.html#DubostBNDDGEWGN20

Florian Dubost Hieab Adams Pinar Yilmaz Gerda Bortsova Gijs van Tulder Mohammad Arfan Ikram Wiro J. Niessen Meike W. Vernooij Marleen de Bruijne Weakly supervised object detection with 2D and 3D regression neural networks. 101767 2020 65 Medical Image Anal. https://doi.org/10.1016/j.media.2020.101767 https://www.wikidata.org/entity/Q97561095 db/journals/mia/mia65.html#DubostAYBTINVB20

Subhradeep Kayal Florian Dubost Harm A. W. M. Tiddens Marleen de Bruijne Spectral Data Augmentation Techniques to Quantify Lung Pathology from CT-Images. 586-590 2020 ISBI https://doi.org/10.1109/ISBI45749.2020.9098581 conf/isbi/2020 db/conf/isbi/isbi2020.html#KayalDTB20

Oliver Werner Kimberlin M. H. van Wijnen Wiro J. Niessen Marius de Groot Meike W. Vernooij Florian Dubost Marleen de Bruijne When Weak Becomes Strong: Robust Quantification of White Matter Hyperintensities in Brain MRI scans. 2020 abs/2004.05578 CoRR https://arxiv.org/abs/2004.05578 db/journals/corr/corr2004.html#abs-2004-05578

Subhradeep Kayal Florian Dubost Harm A. W. M. Tiddens Marleen de Bruijne Spectral Data Augmentation Techniques to quantify Lung Pathology from CT-images. 2020 abs/2004.11989 CoRR https://arxiv.org/abs/2004.11989 db/journals/corr/corr2004.html#abs-2004-11989

Suzanne C. Wetstein Cristina González-Gonzalo Gerda Bortsova Bart Liefers Florian Dubost Ioannis Katramados Laurens Hogeweg Bram van Ginneken Josien P. W. Pluim Marleen de Bruijne Clara I. Sánchez Mitko Veta Adversarial Attack Vulnerability of Medical Image Analysis Systems: Unexplored Factors. 2020 abs/2006.06356 CoRR https://arxiv.org/abs/2006.06356 db/journals/corr/corr2006.html#abs-2006-06356

Soumick Chatterjee Kartik Prabhu Mahantesh Pattadkal Gerda Bortsova Florian Dubost Hendrik Mattern Marleen de Bruijne Oliver Speck Andreas Nürnberger DS6: Deformation-aware learning for small vessel segmentation with small, imperfectly labeled dataset. 2020 abs/2006.10802 CoRR https://arxiv.org/abs/2006.10802 db/journals/corr/corr2006.html#abs-2006-10802

Florian Dubost Erin Hong Daniel Y. Fu Nandita Bhaskhar Siyi Tang Khaled Saab 0002 Daniel L. Rubin Jared Dunnmon Christopher Lee-Messer Let's Hope it Works! Inaccurate Supervision of Neural Networks with Incorrect Labels: Application to Epilepsy. 2020 abs/2011.14101 CoRR https://arxiv.org/abs/2011.14101 db/journals/corr/corr2011.html#abs-2011-14101

Florian Dubost Hieab Adams Gerda Bortsova Mohammad Arfan Ikram Wiro J. Niessen Meike W. Vernooij Marleen de Bruijne 3D regression neural network for the quantification of enlarged perivascular spaces in brain MRI. 89-100 2019 51 Medical Image Anal. https://doi.org/10.1016/j.media.2018.10.008 https://www.wikidata.org/entity/Q58546707 db/journals/mia/mia51.html#DubostABINVB19

Florian Dubost Pinar Yilmaz Hieab Adams Gerda Bortsova Mohammad Arfan Ikram Wiro J. Niessen Meike W. Vernooij Marleen de Bruijne Enlarged perivascular spaces in brain MRI: Automated quantification in four regions. 534-544 2019 185 NeuroImage https://doi.org/10.1016/j.neuroimage.2018.10.026 https://www.wikidata.org/entity/Q57469342 db/journals/neuroimage/neuroimage185.html#DubostYABINVB19

Vikram Venkatraghavan Florian Dubost Esther E. Bron Wiro J. Niessen Marleen de Bruijne Stefan Klein 0001 Event-Based Modeling with High-Dimensional Imaging Biomarkers for Estimating Spatial Progression of Dementia. 169-180 2019 IPMI https://doi.org/10.1007/978-3-030-20351-1_13 conf/ipmi/2019 db/conf/ipmi/ipmi2019.html#VenkatraghavanD19 Chaoping Zhang Florian Dubost Marleen de Bruijne Stefan Klein 0001 Dirk H. J. Poot APIR-Net: Autocalibrated Parallel Imaging Reconstruction Using a Neural Network. 36-46 2019 MLMIR@MICCAI https://doi.org/10.1007/978-3-030-33843-5_4 conf/miccai/2019mlmir db/conf/miccai/mlmir2019.html#ZhangDB0P19 Florian Dubost Benjamin Collery Antonin Renaudier Axel Roc Nicolas Posocco Wiro J. Niessen Marleen de Bruijne Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks. 88-94 2019 CSI@MICCAI https://doi.org/10.1007/978-3-030-39752-4_10 conf/miccai/2019csi db/conf/miccai/csi2019.html#DubostCRRPNB19 Bernhard Egger Markus D. Schirmer Florian Dubost Marco J. Nardin Natalia S. Rost Polina Golland Patient-Specific Conditional Joint Models of Shape, Image Features and Clinical Indicators. 93-101 2019 MICCAI (4) https://doi.org/10.1007/978-3-030-32251-9_11 https://www.wikidata.org/entity/Q96137810 conf/miccai/2019-4 db/conf/miccai/miccai2019-4.html#EggerSDNRG19 Florian Dubost Max Dünnwald Denver Huff Vincent Scheumann Frank Schreiber Meike W. Vernooij Wiro J. Niessen Martin Skalej Stefanie Schreiber Steffen Oeltze-Jafra Marleen de Bruijne Automated Quantification of Enlarged Perivascular Spaces in Clinical Brain MRI Across Sites. 103-111 2019 OR/MLCN@MICCAI https://doi.org/10.1007/978-3-030-32695-1_12 conf/miccai/2019mlcn db/conf/miccai/mlcn2019.html#DubostDHSSVNSSO19 Kimberlin M. H. van Wijnen Florian Dubost Pinar Yilmaz Mohammad Arfan Ikram Wiro J. Niessen Hieab Adams Meike W. Vernooij Marleen de Bruijne Automated Lesion Detection by Regressing Intensity-Based Distance with a Neural Network. 234-242 2019 MICCAI (4) https://doi.org/10.1007/978-3-030-32251-9_26 conf/miccai/2019-4 db/conf/miccai/miccai2019-4.html#WijnenDYINAVB19 Florian Dubost Gerda Bortsova Hieab Adams Mohammad Arfan Ikram Wiro J. Niessen Meike W. Vernooij Marleen de Bruijne Hydranet: Data Augmentation for Regression Neural Networks. 438-446 2019 MICCAI (4) https://doi.org/10.1007/978-3-030-32251-9_48 conf/miccai/2019-4 db/conf/miccai/miccai2019-4.html#DubostBAINVB19 Gerda Bortsova Florian Dubost Laurens Hogeweg Ioannis Katramados Marleen de Bruijne Semi-supervised Medical Image Segmentation via Learning Consistency Under Transformations. 810-818 2019 MICCAI (6) https://doi.org/10.1007/978-3-030-32226-7_90 conf/miccai/2019-6 db/conf/miccai/miccai2019-6.html#BortsovaDHKB19

Vikram Venkatraghavan Florian Dubost Esther E. Bron Wiro J. Niessen Marleen de Bruijne Stefan Klein 0001 Event-Based Modeling with High-Dimensional Imaging Biomarkers for Estimating Spatial Progression of Dementia. 2019 abs/1903.03386 CoRR http://arxiv.org/abs/1903.03386 db/journals/corr/corr1903.html#abs-1903-03386

Florian Dubost Hieab Adams Pinar Yilmaz Gerda Bortsova Gijs van Tulder Mohammad Arfan Ikram Wiro J. Niessen Meike W. Vernooij Marleen de Bruijne Weakly Supervised Object Detection with 2D and 3D Regression Neural Networks. 2019 abs/1906.01891 CoRR http://arxiv.org/abs/1906.01891 db/journals/corr/corr1906.html#abs-1906-01891

Florian Dubost Marleen de Bruijne Marco Nardin Adrian V. Dalca Kathleen L. Donahue Anne-Katrin Giese Mark R. Etherton Ona Wu Marius de Groot Wiro J. Niessen Meike W. Vernooij Natalia S. Rost Markus D. Schirmer Automated Image Registration Quality Assessment Utilizing Deep-learning based Ventricle Extraction in Clinical Data. 2019 abs/1907.00695 CoRR http://arxiv.org/abs/1907.00695 db/journals/corr/corr1907.html#abs-1907-00695

Bernhard Egger Markus D. Schirmer Florian Dubost Marco J. Nardin Natalia S. Rost Polina Golland Patient-specific Conditional Joint Models of Shape, Image Features and Clinical Indicators. 2019 abs/1907.07783 CoRR http://arxiv.org/abs/1907.07783 db/journals/corr/corr1907.html#abs-1907-07783

Kimberlin M. H. van Wijnen Florian Dubost Pinar Yilmaz Mohammad Arfan Ikram Wiro J. Niessen Hieab Adams Meike W. Vernooij Marleen de Bruijne Automated Lesion Detection by Regressing Intensity-Based Distance with a Neural Network. 2019 abs/1907.12452 CoRR http://arxiv.org/abs/1907.12452 db/journals/corr/corr1907.html#abs-1907-12452

Chaoping Zhang Florian Dubost Marleen de Bruijne Stefan Klein 0001 Dirk H. J. Poot APIR-Net: Autocalibrated Parallel Imaging Reconstruction using a Neural Network. 2019 abs/1909.09006 CoRR http://arxiv.org/abs/1909.09006 db/journals/corr/corr1909.html#abs-1909-09006

Florian Dubost Benjamin Collery Antonin Renaudier Axel Roc Nicolas Posocco Gerda Bortsova Wiro J. Niessen Marleen de Bruijne Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks. 2019 abs/1911.01126 CoRR http://arxiv.org/abs/1911.01126 db/journals/corr/corr1911.html#abs-1911-01126

Gerda Bortsova Florian Dubost Laurens Hogeweg Ioannis Katramados Marleen de Bruijne Semi-Supervised Medical Image Segmentation via Learning Consistency under Transformations. 2019 abs/1911.01218 CoRR http://arxiv.org/abs/1911.01218 db/journals/corr/corr1911.html#abs-1911-01218

Gerda Bortsova Florian Dubost Silas N. Ørting Ioannis Katramados Laurens Hogeweg Laura H. Thomsen Mathilde M. W. Wille Marleen de Bruijne Deep Learning from Label Proportions for Emphysema Quantification. 768-776 2018 MICCAI (2) https://doi.org/10.1007/978-3-030-00934-2_85 conf/miccai/2018-2 db/conf/miccai/miccai2018-2.html#BortsovaDOKHTWB18 Filipe Marques Florian Dubost Mariette Kemner-van de Corput Harm A. W. M. Tiddens Marleen de Bruijne Quantification of lung abnormalities in cystic fibrosis using deep networks. 105741G 2018 Image Processing https://doi.org/10.1117/12.2292188 conf/miip/2018 db/conf/miip/miip2018.html#MarquesDCTB18

Florian Dubost Hieab Adams Gerda Bortsova Mohammad Arfan Ikram Wiro J. Niessen Meike W. Vernooij Marleen de Bruijne 3D Regression Neural Network for the Quantification of Enlarged Perivascular Spaces in Brain MRI. 2018 abs/1802.05914 CoRR http://arxiv.org/abs/1802.05914 db/journals/corr/corr1802.html#abs-1802-05914

Filipe Marques Florian Dubost Mariette Kemner-van de Corput Harm A. W. M. Tiddens Marleen de Bruijne Quantification of Lung Abnormalities in Cystic Fibrosis using Deep Networks. 2018 abs/1803.07991 CoRR http://arxiv.org/abs/1803.07991 db/journals/corr/corr1803.html#abs-1803-07991

Florian Dubost Gerda Bortsova Hieab Adams Mohammad Arfan Ikram Wiro J. Niessen Meike W. Vernooij Marleen de Bruijne Hydranet: Data Augmentation for Regression Neural Networks. 2018 abs/1807.04798 CoRR http://arxiv.org/abs/1807.04798 db/journals/corr/corr1807.html#abs-1807-04798

Gerda Bortsova Florian Dubost Silas N. Ørting Ioannis Katramados Laurens Hogeweg Laura H. Thomsen Mathilde M. W. Wille Marleen de Bruijne Deep Learning from Label Proportions for Emphysema Quantification. 2018 abs/1807.08601 CoRR http://arxiv.org/abs/1807.08601 db/journals/corr/corr1807.html#abs-1807-08601

Florian Dubost Gerda Bortsova Hieab Adams Mohammad Arfan Ikram Wiro J. Niessen Meike W. Vernooij Marleen de Bruijne GP-Unet: Lesion Detection from Weak Labels with a 3D Regression Network. 214-221 2017 MICCAI (3) https://doi.org/10.1007/978-3-319-66179-7_25 conf/miccai/2017-3 db/conf/miccai/miccai2017-3.html#DubostBAINVB17 Gerda Bortsova Gijs van Tulder Florian Dubost Tingying Peng Nassir Navab Aad van der Lugt Daniel Bos Marleen de Bruijne Segmentation of Intracranial Arterial Calcification with Deeply Supervised Residual Dropout Networks. 356-364 2017 MICCAI (3) https://doi.org/10.1007/978-3-319-66179-7_41 conf/miccai/2017-3 db/conf/miccai/miccai2017-3.html#BortsovaTDPNLBB17

Gerda Bortsova Gijs van Tulder Florian Dubost Tingying Peng Nassir Navab Aad van der Lugt Daniel Bos Marleen de Bruijne Segmentation of Intracranial Arterial Calcification with Deeply Supervised Residual Dropout Networks. 2017 abs/1706.01148 CoRR http://arxiv.org/abs/1706.01148 db/journals/corr/corr1706.html#BortsovaTDPNLBB17

Florian Dubost Loïc Peter Christian Rupprecht 0001 Benjamín Gutiérrez-Becker Nassir Navab Hands-Free Segmentation of Medical Volumes via Binary Inputs. 259-268 2016 LABELS/DLMIA@MICCAI https://doi.org/10.1007/978-3-319-46976-8_27 conf/miccai/2016labels db/conf/miccai/labels2016.html#DubostPRGN16

Florian Dubost Loïc Peter Christian Rupprecht 0001 Benjamín Gutiérrez-Becker Nassir Navab Hands-Free Segmentation of Medical Volumes via Binary Inputs. 2016 abs/1609.06192 CoRR http://arxiv.org/abs/1609.06192 db/journals/corr/corr1609.html#DubostPRGN16

Hieab Adams Xingle An Beatriz Gomez Anson Pablo Andrés ArbeláezPablo Arbeláez Janan Arslan David Atkinson Frederik Barkhof Michael Baumgartner 0001 Thabo Beeler Edwin Bennink Upasana Upadhyay Bharadwaj Nandita Bhaskhar Mahlet A. Birhanu Saskia Bollmann Gerda Bortsova Daniel Bos Pascal Bourdon Esther BronEsther E. Bron Marleen de Bruijne Robin Camarasa Isai Daniel Chacón Soumick Chatterjee Nish Chaturvedi Kailin Chen Nan Chen Shuai Chen Yuan Chen Zihao Chen Dalong Cheng Karthikesh Varma Chintalapati Benjamin Collery Olivier Colliot Mariette Kemner-van de Corput Qingjun Cui Adrian V. Dalca Erfan Darzi Kathleen L. Donahue Didier Dormont Marc Dörner Qi Dou 0001 Jared DunnmonJared A. Dunnmon Max Dünnwald Bernhard Egger Mark R. Etherton Tavia E. Evans Ivan Ezhov Yi-Zeng Fang Augusto Fava-Sanches Xue Feng 0001 Riccardo de Feo Daniel Y. FuDaniel Yang Fu Guanghui Fu Zahra Sedghi Gamechi Haojun Gao Anne-Katrin Giese Bram van Ginneken Marta Gironés-Sangüesa Corentin Giroud Juan Domingo Gispert Polina Golland Cristina González-Gonzalo Marius de Groot Inteneural Group Leonidas J. Guibas Benjamín Gutiérrez-Becker Adam W. Harley Laurens Hogeweg Erin Hong Tsung-Lin Hsieh Minghui Hu 0003 Juinn-Dar Huang Qianying Huang Xingchang Huang Denver Huff Alun D. Hughes M. Kamran Ikram Mohammad Arfan Ikram Silvia Ingala Paul F. Jaeger Hans Rolf Jäger Rosana El Jurdi Juhana Kaiponen Ioannis Katramados Subhradeep Kayal Bidur Khanal Bishesh Khanal Sakar Khattar Rupali Khatun Stefan Klein 0001 Michal Klimont Florian Kofler Hugo J. Kuijf Sri Chandana Hudukula Ram Kumar Denis Kutnar Dmitry Lagun Minho Lee Christopher Lee-Messer Bo Li 0088 Hongwei Li 0004 Jie Li 0001 Shuo Li 0001 Yuexiang Li Bart Liefers Fengming Lin Yi Lin Yi Lin 0009 Junze Liu Siyu Liu Timo LöhrTimo Loehr Luigi Lorenzini Aad van der Lugt Jun Ma 0016 Klaus H. Maier-Hein Krish Maniar Guillaume Marie Filipe Marques Hendrik Mattern Moona Mazher Bjoern MenzeBjoern H. Menze Ali Mirzazadeh José Luis Molinuevo Alejandro Mottini Marco NardinMarco J. Nardin Nassir Navab Steven Niederren Wiro J. Niessen Tommaso Di Noto Andreas Nürnberger Steffen Oeltze-Jafra Peter M. A. van Ooijen Silas Nyboe ØrtingSilas N. Ørting A. Cengiz Öztireli Yiwei Pan Arya Yazdan Panah Mahantesh Pattadkal Tingying Peng Loïc Peter Maxwell PikeMax Pike Ioannis Pitsiorlas Josien P. W. Pluim Dirk H. J. Poot Nicolas Posocco Kartik Prabhu Élodie Puybareau Abdul Qayyum 0002 Kun Qian Riyu Qiu Chethan Radhakrishna Muhammad Imran RazzakImran Razzak Rafael Rehwald Antonin Renaudier Fernanda L. Ribeiro Jonas Richiardi Saifeddine Rjiba Axel Roc Cristóbal Rodero Natalia S. Rost Daniel L. Rubin Ynte M. Ruigrok Christian Rupprecht 0001 Khaled Saab 0002Khaled Kamal Saab Clara I. Sánchez Chompunuch Sarasaen Irene C. van der Schaaf Vincent Scheumann Markus SchirmerMarkus D. Schirmer Hannes Schnurre Frank Schreiber Stefanie Schreiber Alessandro Sciarra Dhaval Shah Siddharth Sharma Liang Shi Pengcheng Shi Suprosanna Shit Nanna Maria Sijtsema Ashish Kumar Singh Gurprit Singh Martin Skalej Lorna Smith Oliver Speck Arvind Srinivasan 0009 Bruno Stankoff Colton Stearns Ruisheng Su Carole H. Sudre Raviteja Sutrave Siyi Tang Rong Tao Christian Theobalt Laura H. Thomsen Harm A. TiddensHarm A. W. M. Tiddens Therese Tillin Kimberley M. Timmins Guillaume Tochon Jussi Tohka Federico Tombari Yi-Shan Tsai Gijs van Tulder Hélène Urien Thierry Urruty Mikaela Angelina Uy Ghislain Vaillant Romain Valabrègue Luisa Vargas Cristina Nader Vasconcelos Bas H. M. van der Velden Isabelle F. van der Velpen Birgitta K. Velthuis Vikram Venkatraghavan Meike W. Vernooij Mitko Veta Urszula Walinska Anping Wang Jiacheng Wang 0002 Liansheng Wang 0002 Shuxin Wang Tian Wang Oliver Werner Suzanne C. Wetstein Gordon Wetzstein Benedikt Wiestler Kimberlin M. H. van Wijnen Mathilde M. W. Wille Frank J. Wolters Ona Wu Yan Xia Donglai Xiang Cong Xie Marshall Xu Shangliang Xu Guandao Yang Xiaoping Yang 0001 Yung-Ching Yang Yunqiao Yang 0001 Hadya Yassin Wang Yifan 0001 Pinar Yilmaz Yin Yin Chun-Chih Yu Chaoping Zhang Sam Zhang Xuan Zhang Qingqing Zhao Yang Zheng Kai Zhong Zhusi Zhong Hongyu ZhouHong-Yu Zhou Maria A. Zuluaga Max Zuo