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Wenjun Shen
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Publications
- 2025
[j16]Xindian Wei
, Tianyi Chen, Xibiao Wang, Wenjun Shen, Cheng Liu, Si Wu, Hau-San Wong:
COME: contrastive mapping learning for spatial reconstruction of single-cell RNA sequencing data. Bioinform. 41(3) (2025)
[j15]Xianyong Zhou, Xindian Wei, Cheng Liu, Wenjun Shen, Ping Xuan, Si Wu, Hau-San Wong:
Robust subspace structure discovery for cell type identification in scRNA-seq data. BMC Bioinform. 26(1): 295 (2025)
[c10]Tianyi Chen, Yunfei Zhang, Lianxin Xie, Wenjun Shen, Si Wu, Hau-San Wong:
SpotDiff: Spatial Gene Expression Imputation Diffusion with Single-Cell RNA Sequencing Data Integration. AAAI 2025: 15848-15856
[i1]Liang Peng, Haopeng Liu, Yixuan Ye, Cheng Liu, Wenjun Shen, Si Wu, Hau-San Wong:
Refinement Contrastive Learning of Cell-Gene Associations for Unsupervised Cell Type Identification. CoRR abs/2512.10640 (2025)- 2024
[j13]Tianyi Chen, Xindian Wei
, Lianxin Xie, Yunfei Zhang, Cheng Liu, Wenjun Shen, Si Wu, Hau-San Wong
:
SELF-Former: multi-scale gene filtration transformer for single-cell spatial reconstruction. Briefings Bioinform. 25(6) (2024)
[c8]Lu Lin, Wen Xue, Xindian Wei, Wenjun Shen, Cheng Liu, Si Wu, Hau-San Wong:
SCTrans: Multi-scale scRNA-seq Sub-vector Completion Transformer for Gene-selective Cell Type Annotation. IJCAI 2024: 5954-5962- 2023
[j10]Quanpeng Song, Guanyue Li, Si Wu, Wenjun Shen, Hau-San Wong
:
Discriminator feature-based progressive GAN inversion. Knowl. Based Syst. 261: 110186 (2023)
[j9]Xiaoyang Huo, Xiangping Zeng, Si Wu, Wenjun Shen, Hau-San Wong
:
Collaborative Learning with Unreliability Adaptation for Semi-Supervised Image Classification. Pattern Recognit. 133: 109032 (2023)- 2022
[j6]Cheng Liu, Wenming Cao
, Si Wu
, Wenjun Shen, Dazhi Jiang
, Zhiwen Yu
, Hau-San Wong
:
Supervised Graph Clustering for Cancer Subtyping Based on Survival Analysis and Integration of Multi-Omic Tumor Data. IEEE ACM Trans. Comput. Biol. Bioinform. 19(2): 1193-1202 (2022)
[j5]Cheng Liu, Wenming Cao
, Si Wu
, Wenjun Shen, Dazhi Jiang
, Zhiwen Yu
, Hau-San Wong
:
Asymmetric Graph-Guided Multitask Survival Analysis With Self-Paced Learning. IEEE Trans. Neural Networks Learn. Syst. 33(2): 654-666 (2022)- 2020
[j2]Cheng Liu, Si Wu, Wenming Cao, Wenjun Shen
, Dazhi Jiang, Zhiwen Yu, Hau-San Wong
:
Joint subspace and discriminative learning for self-paced domain adaptation. Knowl. Based Syst. 205: 106285 (2020)

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