LSD 3.0: a comprehensive resource for the leaf senescence research community.

Jingchu Luo https://orcid.org/0000-0002-8131-3847

Zhonghai Li Yang Zhang 0042 Dong Zou Yi Zhao 0013 Hou-Ling Wang Yi Zhang Xinli Xia Jingchu Luo Hongwei Guo Zhang Zhang 0002 LSD 3.0: a comprehensive resource for the leaf senescence research community. D1069-D1075 2020 48 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkz898 https://www.wikidata.org/entity/Q90624912 db/journals/nar/nar48.html#LiZZZWZXLG020

Jingchu Luo GSA and BIGD: Filling the Gap of Bioinformatics Resource and Service in China<sup>*</sup>. 11-13 2017 15 Genom. Proteom. Bioinform. 1 https://doi.org/10.1016/j.gpb.2017.02.001 https://www.wikidata.org/entity/Q37683333 db/journals/gpb/gpb15.html#Luo17

Jinpu Jin Feng Tian 0005 Dechang Yang Yuqi Meng Lei Kong Jingchu Luo Ge Gao 0004 PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants. D1040-D1045 2017 45 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkw982 https://www.wikidata.org/entity/Q28818092 db/journals/nar/nar45.html#JinTYMKLG17

Bo Hu 0034 Jinpu Jin Anyuan Guo He Zhang 0020 Jingchu Luo Ge Gao 0004 GSDS 2.0: an upgraded gene feature visualization server. 1296-1297 2015 31 Bioinform. 8 https://doi.org/10.1093/bioinformatics/btu817 https://www.wikidata.org/entity/Q35367182 db/journals/bioinformatics/bioinformatics31.html#HuJGZLG15

Jingchu Luo Teaching the ABCs of bioinformatics: a brief introduction to the Applied Bioinformatics Course. 1004-1013 2014 15 Briefings Bioinform. 6 https://doi.org/10.1093/bib/bbt065 https://www.wikidata.org/entity/Q34553629 db/journals/bib/bib15.html#Luo14

Zhang Zhang 0002 Weimin Zhu Jingchu Luo Bringing Biocuration to China. 153-155 2014 12 Genom. Proteom. Bioinform. 4 https://doi.org/10.1016/j.gpb.2014.07.001 https://www.wikidata.org/entity/Q35543423 db/journals/gpb/gpb12.html#ZhangZL14

Jinpu Jin He Zhang 0020 Lei Kong Ge Gao 0004 Jingchu Luo PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors. 1182-1187 2014 42 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkt1016 https://www.wikidata.org/entity/Q34381452 db/journals/nar/nar42.html#JinZKGL14

Zhonghai Li Yi Zhao 0013 Xiao-Chuan Liu Jinying Peng Hongwei Guo Jingchu Luo LSD 2.0: an update of the leaf senescence database. 1200-1205 2014 42 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkt1061 https://www.wikidata.org/entity/Q38492368 db/journals/nar/nar42.html#LiZLPGL14

Jun Wang 0060 Lei Kong Ge Gao 0004 Jingchu Luo A brief introduction to web-based genome browsers. 131-143 2013 14 Briefings Bioinform. 2 https://doi.org/10.1093/bib/bbs029 https://www.wikidata.org/entity/Q38024080 db/journals/bib/bib14.html#WangKGL13

Jingchu Luo Harm Nijveen Teresa K. Attwood David Phillip Judge Sándor Pongor David Landsman Martin J. Bishop 0002 Obituary: In memory of Jack Leunissen. 261-262 2013 14 Briefings Bioinform. 3 https://doi.org/10.1093/bib/bbt036 https://www.wikidata.org/entity/Q28941953 db/journals/bib/bib14.html#LuoNAJPLB13

Lei Kong Jun Wang 0060 Shuqi Zhao Xiaocheng Gu Jingchu Luo Ge Gao 0004 ABrowse - a customizable next-generation genome browser framework. 2 2012 13 BMC Bioinform. https://doi.org/10.1186/1471-2105-13-2 https://www.wikidata.org/entity/Q28732442 db/journals/bmcbi/bmcbi13.html#KongWZGLG12

Xiao-Chuan Liu Zhonghai Li Zhiqiang Jiang Yi Zhao 0013 Jinying Peng Jinpu Jin Hongwei Guo Jingchu Luo LSD: a leaf senescence database. 1103-1107 2011 39 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkq1169 https://www.wikidata.org/entity/Q34456389 db/journals/nar/nar39.html#LiuLJZPJGL11

He Zhang 0020 Jinpu Jin Liang Tang Yi Zhao 0013 Xiaocheng Gu Ge Gao 0004 Jingchu Luo PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database. 1114-1117 2011 39 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkq1141 https://www.wikidata.org/entity/Q34456306 db/journals/nar/nar39.html#ZhangJTZGGL11

Zhiqiang Jiang Xiao-Chuan Liu Zhiyu Peng Yinan Wan Yusi Ji Wenrong He Wen Wan Jingchu Luo Hongwei Guo AHD2.0: an update version of Arabidopsis Hormone Database for plant systematic studies. 1123-1129 2011 39 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkq1066 https://www.wikidata.org/entity/Q28743772 db/journals/nar/nar39.html#JiangLPWJHWLG11

Kun He 0012 Xueyong Li Junli Zhou Xingwang Deng Hongyu Zhao Jingchu Luo NTAP: for NimbleGen tiling array ChIP-chip data analysis. 1838-1840 2009 25 Bioinform. 14 https://doi.org/10.1093/bioinformatics/btp320 https://www.wikidata.org/entity/Q33452452 db/journals/bioinformatics/bioinformatics25.html#HeLZDZL09

Zhe Li He Zhang 0020 Song Ge Xiaocheng Gu Ge Gao 0004 Jingchu Luo Expression pattern divergence of duplicated genes in rice. 2009 10 BMC Bioinform. S-6 https://doi.org/10.1186/1471-2105-10-S6-S8 https://www.wikidata.org/entity/Q33469909 db/journals/bmcbi/bmcbi10S.html#LiZGGGL09

Xiao-Qiao Liu Jianmin Wu Jun Wang 0060 Xiao-Chuan Liu Shuqi Zhao Zhe Li Lei Kong Xiaocheng Gu Jingchu Luo Ge Gao 0004 WebLab: a data-centric, knowledge-sharing bioinformatic platform. 33-39 2009 37 Nucleic Acids Res. Web-Server-Issue https://doi.org/10.1093/nar/gkp428 https://www.wikidata.org/entity/Q30488526 db/journals/nar/nar37.html#LiuWWLZLKGLG09

Anyuan Guo Xin Chen Ge Gao 0004 He Zhang 0020 Qihui Zhu Xiao-Chuan Liu Yingfu Zhong Xiaocheng Gu Kun He 0012 Jingchu Luo PlantTFDB: a comprehensive plant transcription factor database. 966-969 2008 36 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkm841 https://www.wikidata.org/entity/Q36453985 db/journals/nar/nar36.html#GuoCGZZLZGHL08

Ying Sun Shuqi Zhao Huashan Yu Ge Gao 0004 Jingchu Luo ABCGrid: Application for Bioinformatics Computing Grid. 1175-1177 2007 23 Bioinform. 9 https://doi.org/10.1093/bioinformatics/btm086 https://www.wikidata.org/entity/Q51053482 db/journals/bioinformatics/bioinformatics23.html#SunZYGL07

Qihui Zhu Anyuan Guo Ge Gao 0004 Yingfu Zhong Meng Xu Minren Huang Jingchu Luo DPTF: a database of poplar transcription factors. 1307-1308 2007 23 Bioinform. 10 https://doi.org/10.1093/bioinformatics/btm113 https://www.wikidata.org/entity/Q51036424 db/journals/bioinformatics/bioinformatics23.html#ZhuGGZXHL07

Ge Gao 0004 Yingfu Zhong Anyuan Guo Qihui Zhu Wen Tang Wei-Mou Zheng Xiaocheng Gu Liping Wei Jingchu Luo DRTF: a database of rice transcription factors. 1286-1287 2006 22 Bioinform. 10 https://doi.org/10.1093/bioinformatics/btl107 https://www.wikidata.org/entity/Q38518772 db/journals/bioinformatics/bioinformatics22.html#GaoZGZTZGWL06

Xiyin Wang Xiaoli Shi Zhe Li Qihui Zhu Lei Kong Wen Tang Song Ge Jingchu Luo Statistical inference of chromosomal homology based on gene colinearity and applications to <i>Arabidopsis </i>and rice. 447 2006 7 BMC Bioinform. https://doi.org/10.1186/1471-2105-7-447 https://www.wikidata.org/entity/Q33260265 db/journals/bmcbi/bmcbi7.html#WangSLZKTGL06

Jianmin Wu Xizeng Mao Tao Cai Jingchu Luo Liping Wei KOBAS server: a web-based platform for automated annotation and pathway identification. 720-724 2006 34 Nucleic Acids Res. Web-Server-Issue https://doi.org/10.1093/nar/gkl167 https://www.wikidata.org/entity/Q34974449 db/journals/nar/nar34.html#WuMCLW06

Anyuan Guo Kun He 0012 Di Liu Shunong Bai Xiaocheng Gu Liping Wei Jingchu Luo DATF: a database of Arabidopsis transcription factors. 2568-2569 2005 21 Bioinform. 10 https://doi.org/10.1093/bioinformatics/bti334 https://www.wikidata.org/entity/Q81440850 db/journals/bioinformatics/bioinformatics21.html#GuoHLBGWL05

Yunjia Chen Yong Zhang Yanbin Yin Ge Gao 0004 Songgang Li Ying Jiang Xiaocheng Gu Jingchu Luo SPD - a web-based secreted protein database. 169-173 2005 33 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gki093 https://www.wikidata.org/entity/Q24796109 db/journals/nar/nar33.html#ChenZYGLJGL05

Xin Wu Michael G. Walker 0001 Jingchu Luo Liping Wei GBA server: EST-based digital gene expression profiling. 673-676 2005 33 Nucleic Acids Res. Web-Server-Issue https://doi.org/10.1093/nar/gki480 https://www.wikidata.org/entity/Q24813326 db/journals/nar/nar33.html#WuWLW05

Xiaomin Ying Hong Luo Jingchu Luo Wuju Li RDfolder: a web server for prediction of RNA secondary structure. 150-153 2004 32 Nucleic Acids Res. Web-Server-Issue db/journals/nar/nar32.html#YingLLL04 https://doi.org/10.1093/nar/gkh445 https://www.wikidata.org/entity/Q35557812

Hong Luo Jingchu Luo Initial SARS Genome Data Analysis Using a Bioinformatics Platform. 271-276 2004 conf/apbc/2004 APBC http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Luo.html db/conf/apbc/apbc2004.html#LuoL04

Zhou Yu Tao Li Jindong Zhao Jingchu Luo PGAAS: a prokaryotic genome assembly assistant system. 661-665 2002 18 Bioinform. 5 db/journals/bioinformatics/bioinformatics18.html#YuLZL02 https://doi.org/10.1093/bioinformatics/18.5.661 https://www.wikidata.org/entity/Q31068699

Jingchu Luo Bioinformatics service, education and research: the EMBnet and CBI. 173-177 2002 2 Silico Biol. 3 http://content.iospress.com/articles/in-silico-biology/isb00039 http://www.bioinfo.de/isb/abstracts/02/0016.html db/journals/isb/isb2.html#Luo02

Zhou Yu Tao Li Jindong Zhao Jingchu Luo PGAAS: A prokaryotic genome assembly assistant system. 45 2001 conf/gcb/2001 German Conference on Bioinformatics db/conf/gcb/gcb2001.html#YuLZL01 Qianning Liao Jingchu Luo Songping Liang Xiaocheng Gu A structural motif of three disulfide bridges and three beta strands in peptides. 1998 conf/gcb/1998 German Conference on Bioinformatics db/conf/gcb/gcb1998.html#LiaoLLG98 Jingchu Luo Christoph W. Sensen Tin Wee Tan Asia Pacific Bioinformatics Network. 1998 conf/gcb/1998 German Conference on Bioinformatics db/conf/gcb/gcb1998.html#LuoST98 Michael J. E. Sternberg Hedvig Hegyi Suhail A. Islam Jingchu Luo Robert B. Russell Towards an Intelligent System for the Automatic Assignment of Domains in Globular Proteins. 376-383 1995 conf/ismb/1995 ISMB db/conf/ismb/ismb1995.html#SternbergHILR95 http://www.aaai.org/Library/ISMB/1995/ismb95-045.php Terri K. AttwoodTeresa K. Attwood Shunong Bai Martin J. Bishop 0002 Tao Cai Xin Chen Yunjia Chen Xingwang Deng Ge Gao 0004 Song Ge Xiaocheng Gu Anyuan Guo Hongwei Guo Kun He 0012 Wenrong He Hedvig Hegyi Bo Hu 0034 Minren Huang Suhail A. Islam Yusi Ji Ying Jiang Zhiqiang Jiang Jinpu Jin David Phillip Judge Lei Kong David Landsman Songgang Li Tao Li Wuju Li Xueyong Li Zhe Li Zhonghai Li Songping Liang Qianning Liao Di Liu Xiao-Chuan Liu Xiao-Qiao Liu Hong Luo Xizeng Mao Yuqi Meng Harm Nijveen Jinying Peng Zhiyu Peng Sándor Pongor Robert B. Russell Christoph W. Sensen Xiaoli Shi Michael J. E. Sternberg Ying Sun Tin Wee Tan Liang Tang Wen Tang Feng Tian 0005 Michael G. Walker 0001 Wen Wan Yinan Wan Hou-Ling Wang Jun Wang 0060 Xiyin Wang Liping Wei Jianmin Wu Xin Wu Xinli Xia Meng Xu Dechang Yang Yanbin Yin Xiaomin Ying Huashan Yu Zhou Yu He Zhang 0020 Yang Zhang 0042 Yi Zhang Yong Zhang Zhang Zhang 0002 Hongyu Zhao Jindong Zhao Shuqi Zhao Yi Zhao 0013 Wei-Mou Zheng Yingfu Zhong Junli Zhou Qihui Zhu Weimin Zhu Dong Zou