DPHL v.2: An updated and comprehensive DIA pan-human assay library for quantifying more than 14,000 proteins.

Sander R. Piersma

Zhangzhi Xue Tiansheng Zhu Fangfei Zhang Cheng Zhang Nan Xiang Liujia Qian Xiao Yi Yaoting Sun Wei Liu Xue Cai Linyan Wang Xizhe Dai Liang Yue Lu Li 0012 Thang Viet Pham Sander R. Piersma Qi Xiao Meng Luo Cong Lu Jiang Zhu Yongfu Zhao Guangzhi Wang Junhong Xiao Tong Liu Zhiyu Liu Yi He Qijun Wu Tingting Gong Jianqin Zhu Zhiguo Zheng Juan Ye Yan Li Connie R. Jimenez Jun A Tiannan Guo DPHL v.2: An updated and comprehensive DIA pan-human assay library for quantifying more than 14,000 proteins. 100792 2023 July 4 Patterns 7 https://doi.org/10.1016/j.patter.2023.100792 db/journals/patterns/patterns4.html#XueZZZXQYSLCWDYLPPXLLZZWXLLHWG23

Tiansheng Zhu Yi Zhu Yue Xuan Huanhuan Gao Xue Cai Sander R. Piersma Thang Viet Pham Tim Schelfhorst Richard R. G. D. Haas Irene V. Bijnsdorp Rui Sun Liang Yue Guan Ruan Qiushi Zhang Mo Hu Yue Zhou Winan J. Van Houdt Tessa Y. S. Le Large Tiannan Guo DPHL: A DIA Pan-human Protein Mass Spectrometry Library for Robust Biomarker Discovery. 104-119 2020 18 Genom. Proteom. Bioinform. 2 https://doi.org/10.1016/j.gpb.2019.11.008 https://www.wikidata.org/entity/Q98469544 db/journals/gpb/gpb18.html#ZhuZXGCPPSHBSYR20

Thang V. Pham Sander R. Piersma Marc Warmoes Connie R. Jimenez On the beta-binomial model for analysis of spectral count data in label-free tandem mass spectrometry-based proteomics. 363-369 2010 26 Bioinform. 3 https://doi.org/10.1093/bioinformatics/btp677 https://www.wikidata.org/entity/Q33518240 db/journals/bioinformatics/bioinformatics26.html#PhamPWJ10

Marius C. Codrea Connie R. Jimenez Sander R. Piersma Jaap Heringa Elena Marchiori Robust Peak Detection and Alignment of nanoLC-FT Mass Spectrometry Data. 35-46 2007 conf/evoW/2007bio EvoBIO https://doi.org/10.1007/978-3-540-71783-6_4 db/conf/evoW/evobio2007.html#CodreaJPHM07 Jun A Irene V. Bijnsdorp Xue Cai Marius C. Codrea Xizhe Dai Huanhuan Gao Tingting Gong Tiannan Guo Richard R. G. D. Haas Yi He Jaap Heringa Winan J. Van Houdt Mo Hu Connie R. Jimenez Tessa Y. S. Le Large Lu Li 0012 Yan Li Tong Liu Wei Liu Zhiyu Liu Cong Lu Meng Luo Elena Marchiori Thang V. Pham Thang Viet Pham Liujia Qian Guan Ruan Tim Schelfhorst Rui Sun Yaoting Sun Guangzhi Wang Linyan Wang Marc Warmoes Qijun Wu Nan Xiang Junhong Xiao Qi Xiao Yue Xuan Zhangzhi Xue Juan Ye Xiao Yi Liang Yue Cheng Zhang Fangfei Zhang Qiushi Zhang Yongfu Zhao Zhiguo Zheng Yue Zhou Jiang Zhu Jianqin Zhu Tiansheng Zhu Yi Zhu