Building a Pan-Genome Reference for a Population.

Dent Earl

Ngan Nguyen Glenn Hickey Daniel R. Zerbino Brian J. Raney Dent Earl Joel Armstrong W. James Kent David Haussler Benedict Paten Building a Pan-Genome Reference for a Population. 387-401 2015 22 J. Comput. Biol. 5 https://doi.org/10.1089/cmb.2014.0146 https://www.wikidata.org/entity/Q40454232 db/journals/jcb/jcb22.html#NguyenHZREAKHP15

Dent Earl Evaluation And Application Of The Three A's Of Genomics: Assembly, Alignment, Annotation. 2014 University of California, Santa Cruz, USA http://www.escholarship.org/uc/item/5f59g9dh http://n2t.net/ark:/13030/m54q989m https://www.base-search.net/Record/088abd132117fb2a360604d0779c45caf7c8fc659bdcf76964681b1916cfa6cc base-search.net (ftcdlib:qt5f59g9dh) Ngan Nguyen Glenn Hickey Daniel R. Zerbino Brian J. Raney Dent Earl Joel Armstrong David Haussler Benedict Paten Building a Pangenome Reference for a Population. 207-221 2014 RECOMB https://doi.org/10.1007/978-3-319-05269-4_17 conf/recomb/2014 db/conf/recomb/recomb2014.html#NguyenHZREAHP14

Glenn Hickey Benedict Paten Dent Earl Daniel R. Zerbino David Haussler HAL: a hierarchical format for storing and analyzing multiple genome alignments. 1341-1342 2013 29 Bioinform. 10 https://doi.org/10.1093/bioinformatics/btt128 https://www.wikidata.org/entity/Q40729029 db/journals/bioinformatics/bioinformatics29.html#HickeyPEZH13

Benedict Paten Mark Diekhans Dent Earl John St. John Jian Ma 0004 Bernard B. Suh David Haussler Cactus Graphs for Genome Comparisons. 469-481 2011 18 J. Comput. Biol. 3 https://doi.org/10.1089/cmb.2010.0252 https://www.wikidata.org/entity/Q44617829 db/journals/jcb/jcb18.html#PatenDEJMSH11

Charles J. Vaske Stephen C. Benz J. Zachary Sanborn Dent Earl Christopher Szeto Jingchun Zhu David Haussler Joshua M. Stuart Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM. 237-245 2010 26 Bioinform. 12 https://doi.org/10.1093/bioinformatics/btq182 https://www.wikidata.org/entity/Q33597322 db/journals/bioinformatics/bioinformatics26.html#VaskeBSESZHS10

Benedict Paten Mark Diekhans Dent Earl John St. John Jian Ma 0004 Bernard B. Suh David Haussler Cactus Graphs for Genome Comparisons. 410-425 2010 RECOMB https://doi.org/10.1007/978-3-642-12683-3_27 https://www.wikidata.org/entity/Q29026524 conf/recomb/2010 db/conf/recomb/recomb2010.html#PatenDEJMSH10 Joel Armstrong Stephen C. Benz Mark Diekhans David Haussler Glenn Hickey John St. John W. James Kent Jian Ma 0004 Ngan Nguyen Benedict Paten Brian J. Raney J. Zachary Sanborn Joshua M. Stuart Bernard B. Suh Christopher Szeto Charles J. Vaske Daniel R. Zerbino Jingchun Zhu