Comparative analysis of machine learning algorithms on the microbial strain-specific AMP prediction.

Malak Pirtskhalava

Boris Vishnepolsky Maya Grigolava Grigol Managadze Andrei Gabrielian Alex Rosenthal Darrell E. Hurt Michael Tartakovsky Malak Pirtskhalava Comparative analysis of machine learning algorithms on the microbial strain-specific AMP prediction. 2022 23 Briefings Bioinform. 4 https://doi.org/10.1093/bib/bbac233 db/journals/bib/bib23.html#VishnepolskyGMG22

Malak Pirtskhalava Anthony A. Amstrong Maia Grigolava Mindia Chubinidze Evgenia Alimbarashvili Boris Vishnepolsky Andrei E. Gabrielian Alex Rosenthal Darrell E. Hurt Michael Tartakovsky DBAASP v3: database of antimicrobial/cytotoxic activity and structure of peptides as a resource for development of new therapeutics. D288-D297 2021 49 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkaa991 https://www.wikidata.org/entity/Q101339830 db/journals/nar/nar49.html#PirtskhalavaAGC21

Boris Vishnepolsky Malak Pirtskhalava Comment on: 'Empirical comparison of web-based antimicrobial peptide prediction tools'. 2692-2694 2019 35 Bioinform. 15 https://doi.org/10.1093/bioinformatics/bty1023 https://www.wikidata.org/entity/Q90609614 db/journals/bioinformatics/bioinformatics35.html#VishnepolskyP19

Boris Vishnepolsky Andrei E. Gabrielian Alex Rosenthal Darrell E. Hurt Michael Tartakovsky Grigol Managadze Maya Grigolava George I. Makhatadze Malak Pirtskhalava Predictive Model of Linear Antimicrobial Peptides Active against Gram-Negative Bacteria. 1141-1151 2018 58 J. Chem. Inf. Model. 5 https://doi.org/10.1021/acs.jcim.8b00118 https://www.wikidata.org/entity/Q88534428 db/journals/jcisd/jcisd58.html#VishnepolskyGRH18

Malak Pirtskhalava Andrei E. Gabrielian Phillip Cruz Hannah L. Griggs R. Burke Squires Darrell E. Hurt Maia Grigolava Mindia Chubinidze George Gogoladze Boris Vishnepolsky Vsevolod Alekseev Alex Rosenthal Michael Tartakovsky DBAASP v.2: an enhanced database of structure and antimicrobial/cytotoxic activity of natural and synthetic peptides. 1104-1112 2016 44 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkv1174 https://www.wikidata.org/entity/Q36434759 db/journals/nar/nar44.html#PirtskhalavaGCG16

Boris Vishnepolsky Malak Pirtskhalava Prediction of Linear Cationic Antimicrobial Peptides Based on Characteristics Responsible for Their Interaction with the Membranes. 1512-1523 2014 54 J. Chem. Inf. Model. 5 https://doi.org/10.1021/ci4007003 https://www.wikidata.org/entity/Q33685084 db/journals/jcisd/jcisd54.html#VishnepolskyP14

Boris Vishnepolsky Malak Pirtskhalava ALIGN_MTX - An optimal pairwise textual sequence alignment program, adapted for using in sequence-structure alignment. 235-238 2009 33 Comput. Biol. Chem. 3 https://doi.org/10.1016/j.compbiolchem.2009.04.003 https://www.wikidata.org/entity/Q33455226 db/journals/candc/candc33.html#VishnepolskyP09

Vsevolod Alekseev Evgenia Alimbarashvili Anthony A. Amstrong Mindia Chubinidze Phillip Cruz Andrei Gabrielian Andrei E. Gabrielian George Gogoladze Hannah L. Griggs Maia GrigolavaMaya Grigolava Darrell E. Hurt George I. Makhatadze Grigol Managadze Alex Rosenthal R. Burke Squires Michael Tartakovsky Boris Vishnepolsky