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fix(segmentation): Changes to fix problems with non hydrated/loaded segmentations to be viewable when switching hanging protocols (e.g. MPR)#5139

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jbocce merged 12 commits intoOHIF:masterfrom
jbocce:fix/data-portal-segmentations-and-mpr
Jun 27, 2025
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fix(segmentation): Changes to fix problems with non hydrated/loaded segmentations to be viewable when switching hanging protocols (e.g. MPR)#5139
jbocce merged 12 commits intoOHIF:masterfrom
jbocce:fix/data-portal-segmentations-and-mpr

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@jbocce jbocce commented Jun 17, 2025

Context

Attempting to switch hanging protocols prior to a segmentation being hydrated/loaded causes various exceptions and blank viewports.

Changes & Results

Adding segmentation via data portal in MPR mode (and other hanging protocols).

Use volumeLoader.createAndCacheVolume to create the volume for a SEG display set. This produces a StreamingImageVolume which is essential for switching to hanging protocols like MPR. RTSTRUCT display sets are now marked as reconstructable.

For when multiple display sets occupy the active viewport, cache and restore each appropriately.

Added tests:

  • launch MPR with unhydrated segmentation.
  • launch MPR and then add (but not load) a segmentation from the overlay menu
  • add (but not load) a segmentation from the overlay menu and then launch MPR

Testing

Three tests at the very least...

Test A

  1. Open a study in the viewer
  2. Add a segmentation using the data overlay menu. Be sure not to LOAD the segmentation (i.e. ignore any prompts to do so)
  3. Switch to a different hanging protocol (e.g., MPR - Multiplanar Reformatting)
  4. Ensure that the segmentation appears in the new layout

Test B

  1. Open a study in the viewer.
  2. Switch to a different hanging protocol (e.g., MPR - Multiplanar Reformatting)
  3. Add a segmentation using the data overlay menu in one of the viewports. Be sure not to LOAD the segmentation (i.e. ignore any prompts to do so)
  4. Ensure the segmentation appears and the viewports maintain the same view (i.e. just he appearance of the segmentation should change).

Test C

  1. Open an study in the viewer.
  2. Open a SEG from the thumbnail list either by dragging and dropping it into a viewport or by double clicking it. Be sure not to LOAD the segmentation (i.e. ignore any prompts to do so)
  3. Switch to a different hanging protocol (e.g., MPR - Multiplanar Reformatting)
  4. Ensure that the segmentation appears in the new layout

Checklist

PR

  • My Pull Request title is descriptive, accurate and follows the
    semantic-release format and guidelines.

Code

  • My code has been well-documented (function documentation, inline comments,
    etc.)

Public Documentation Updates

  • The documentation page has been updated as necessary for any public API
    additions or removals.

Tested Environment

  • OS: Windows 11
  • Node version: 20.9.0
  • Browser: Chrome 137.0.7151.69

Use volumeLoader.createAndCacheVolume to create the volume for a SEG display set.
This produces a StreamingImageVolume which is essential for switching to hanging protocols like MPR.
RTSTRUCT display sets are now marked as reconstructable.

For when multiple display sets occupy the active viewport, cache and restore each appropriately.

Added tests:
- launch MPR with unhydrated segmentation.
- launch MPR and then add (but not load) a segmentation from the overlay menu
- add (but not load) a segmentation from the overlay menu and then launch MPR
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@jbocce jbocce marked this pull request as draft June 17, 2025 16:29
@jbocce jbocce changed the title fix(segmentation): Changes to permit non hydrated/loaded segmentations to be viewable in hanging protocols fix(segmentation): Changes to permit non hydrated/loaded segmentations to be viewable when switching hanging protocols (e.g. MPR) Jun 17, 2025
@jbocce jbocce changed the title fix(segmentation): Changes to permit non hydrated/loaded segmentations to be viewable when switching hanging protocols (e.g. MPR) fix(segmentation): Changes to fix problems with non hydrated/loaded segmentations to be viewable when switching hanging protocols (e.g. MPR) Jun 17, 2025
@jbocce jbocce marked this pull request as ready for review June 17, 2025 16:43
} else {
await viewport.setVolumes(filteredVolumeInputArray);
}
await viewport.setVolumes(volumeInputArray);
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No longer is there need to set the overlay display set volumes separately.


displaySetsInfo.push(displaySetInfo);

if (id === 'activeDisplaySet') {
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@wayfarer3130, here is where the various overlay display sets are added for the "active display set" of a hanging protocol.

@jbocce jbocce requested review from sedghi and wayfarer3130 June 17, 2025 16:58
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jbocce commented Jun 18, 2025

Thanks

Here are the things i found

  1. Go here http://localhost:3000/viewer?StudyInstanceUIDs=1.3.6.1.4.1.14519.5.2.1.1706.8374.643249677828306008300337414785

Do the data overlay, see does not work

see https://share.cleanshot.com/MGnJgpFZ

This issue is related to the next issue I will be looking at regarding RTSTRUCT. I think the problem is that we get an exception when we try to overlay a SEG or RTSTRUCT on a series that is NOT referenced by the SEG or RTSTRUCT series. Can we leave this for now or should continue fixing all these scenarios in this PR?

@jbocce jbocce requested a review from sedghi June 18, 2025 12:27
jbocce and others added 4 commits June 18, 2025 09:44
…gImageVolume.

Restore changes in CornerstoneViewportService but load all volumes the same way.
…structable flag.

Use an array of display set uids as the value in the displaySetSelectorMap to handle layered viewports.
@jbocce jbocce requested a review from wayfarer3130 June 24, 2025 13:01
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I'm getting exceptions in tmtv mode when I double click various series in the initial view and drag/drop different series in, and then return to the original view. Sometimes it works to change views and sometimes it doesnt

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jbocce commented Jun 25, 2025

I'm getting exceptions in tmtv mode when I double click various series in the initial view and drag/drop different series in, and then return to the original view. Sometimes it works to change views and sometimes it doesnt

Thanks @wayfarer3130. But could you please give me some exact steps? It appears to work the same as in https://viewer-dev.ohif.org/

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jbocce commented Jun 26, 2025

I'm getting exceptions in tmtv mode when I double click various series in the initial view and drag/drop different series in, and then return to the original view. Sometimes it works to change views and sometimes it doesnt

Thanks @wayfarer3130. But could you please give me some exact steps? It appears to work the same as in https://viewer-dev.ohif.org/

Further on this... I have spent a bit of time double clicking series and dragging and dropping series in the TMTV HP. I discovered no specific exceptions that were bugs. I had https://viewer-dev.ohif.org/ side-by-side with this PR branch. Both behaved similarly.

The exceptions I did manage to receive were the following and were ALSO present in master (i.e. viewer-dev)

So @sedghi and @wayfarer3130 unless there are more specific steps and/or exceptions that need to be handled that are CAUSED by this PR, I will not look further.

ViewportGrid.tsx:118 Error: The displaySetInstanceUID 0e19c131-2724-3a1e-e8b9-487df67ed738 does not satisfy the required seriesMatching criteria for the protocol
    at HangingProtocolService._validateRequiredSelectors (HangingProtocolService.ts:1471:1)
    at HangingProtocolService.ts:1438:1
    at Array.forEach (<anonymous>)
    at HangingProtocolService._validateViewportSpecificMatch (HangingProtocolService.ts:1427:1)
    at HangingProtocolService.getViewportsRequireUpdate (HangingProtocolService.ts:713:1)
    at ViewportGrid.tsx:112:1
    at ViewportGrid.tsx:262:1
Route tmtv Error Boundary Error: Volumes being added to viewport fusionCoronal do not share the same FrameOfReferenceUID. This is not yet supported
    at VolumeViewport._isValidVolumeInputArray (BaseVolumeViewport.js:818:1)
    at VolumeViewport.setVolumes (BaseVolumeViewport.js:714:1)
    at VolumeViewport.setVolumes (VolumeViewport.js:101:1)
    at CornerstoneViewportService.setVolumesForViewport (CornerstoneViewportService.ts:895:1)
    at CornerstoneViewportService._setVolumeViewport (CornerstoneViewportService.ts:825:1)
    at CornerstoneViewportService._setDisplaySets (CornerstoneViewportService.ts:1030:1)
    at CornerstoneViewportService.setViewportData (CornerstoneViewportService.ts:468:1)
    at loadViewportData (OHIFCornerstoneViewport.tsx:296:1) null Route tmtv
ViewportGrid.tsx:118 Error: Cannot update viewport with multiple displaySets yet
    at HangingProtocolService.getViewportsRequireUpdate (HangingProtocolService.ts:685:1)
    at ViewportGrid.tsx:112:1
    at ViewportGrid.tsx:262:1

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sedghi commented Jun 26, 2025

Let's merge this and then if Bill got some time can report what he is seeing.

@jbocce jbocce requested a review from sedghi June 26, 2025 19:06
@jbocce jbocce merged commit c2624f1 into OHIF:master Jun 27, 2025
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@jbocce jbocce deleted the fix/data-portal-segmentations-and-mpr branch June 27, 2025 11:11
WillianVarela added a commit to cfaz-net/dicomviewer that referenced this pull request Nov 10, 2025
* chore(version): version.json [skip ci]

* chore(version): Update package versions [skip ci]

* fix: e2e playwright tests runnigns (OHIF#5070)

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* fix(Customization): Fixed incorrect events broadcast  (OHIF#5075)

Co-authored-by: Dan Elkis <dan.elkis@signalpet.com>

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* fix(ui): Prevent unintended text selection and improve component behavior (OHIF#5077)

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* feat: create memo when manually adding and removing annotations (OHIF#5051)

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* docs: Fixed incorrect documentation and variables names (OHIF#5080)

Co-authored-by: Dan Elkis <dan.elkis@signalpet.com>

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* fix(segmentation): Allow for debounced pub/sub events to be reliably cancelled when unsubscribed to. (OHIF#5092)

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* fix(tmtv): Corrected the various section names being referenced. (OHIF#5093)

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* fix(touch): Allow for multi-touch in OHIF (OHIF#5099)

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* fix(WindowLevelActionMenu): The window level menu must show different contents for 3D volume viewports (OHIF#5113)

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* docs: improved migration guides for 3p10 (OHIF#5110)

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* fix: data-viewportId name is illegal, renamed to data-viewportid (OHIF#5121)

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* feat(commandsModule): Enhanced flipViewport and rotateViewport commands (OHIF#5065)

Co-authored-by: Dan Elkis <dan.elkis@signalpet.com>

* fix(ToolbarService): Fixed removeButton bug for removing buttons inside sections (OHIF#5123)

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* fix(hp): When reapplying an hp the display set selectors should be considered. (OHIF#5074)

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* chore(version): version.json [skip ci]

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* fix(getToolbarModule): fix enabled state of image slice sync (OHIF#5136)

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* fix(UnitTest): run was failing due to JS tests importing TS modules (OHIF#5145)

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* fix(action-corners): check hideWhenDisabled at both the evaluator and prop levels (OHIF#5149)

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* chore(deps): bump pbkdf2 from 3.1.2 to 3.1.3 (OHIF#5152)

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* feat: Ultrasound Pleura B-line Annotation Mode & Extension (OHIF#5061)

* test(MeasurementPanel): Converted MeasurementPanel interaction tests from cypress to playwright (OHIF#5153)

* feat(toolbar/hokeys): add pub sub events to hotkeys manager class, subscribe toolbar to hotkeys pressed event (OHIF#5157)

* fix(build): BUILD_PACKAGES_QUICK  PR check (OHIF#5160)

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* feat(labelmap): Add labelmap segmentation in OHIF (OHIF#5158)

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* chore(deps): bump webpack to 5.95.0 (OHIF#5163)

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* fix(segmentation): Changes to fix problems with non hydrated/loaded segmentations to be viewable when switching hanging protocols (e.g. MPR) (OHIF#5139)

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* chore(version): Update package versions [skip ci]

* feat(hp): add onStageChange callback (OHIF#5165)

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* fix(segmentation): Added support for unhydrated RTSTRUCT in MPR. Added support for overlaying segmentations over display sets the segmentations do not reference. (OHIF#5168)

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* feat: Add possibility to add additional props for PanelSection (OHIF#5172)

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* chore(version): Update package versions [skip ci]

* chore: recovery 2  (OHIF#5014) merge to 3.11 (OHIF#5175)

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* fix: add force to remove image from cache (OHIF#5176)

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* fix(overlay-menu): Adding, changing and removing segmentation overlays should update the overlay menu instantly (OHIF#5181)

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* fix(labeling): measurement labeling dialog was overwriting the entire measurement and breaking it (OHIF#5095)

* fix(measurement-group): use measurment study uid instead of active study uid (OHIF#5091)

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* fix(segmentation overlays): Allow for the addition of multiple segmentation overlays. (OHIF#5189)

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* fix(rendering): Introduce SequentialRenderingEngine to resolve canvas size limitation, performance degradation on high res monitors and enhance multi-monitor support (OHIF#5195)

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* fix(security): Patch for Babel vulnerability (OHIF#5193)

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* feat: group clear measurements history (OHIF#5194)

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* feat(rendering): Introduce WebGLContextPool for parallel rendering in ContextPoolRenderingEngine (OHIF#5196)

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* fix: exception in newly added segmentations (OHIF#5198)

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* fix(UnitTests): Fixing "Cannot find module @cornerstonejs/core" error while running unit tests (OHIF#5148)

* ui(icons): Adds action and helper icon artwork for segmentation (OHIF#5200)

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* fix: enhance preview accept method (OHIF#5199)

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* fix(UI): Restored the scroll bar OHIF L&F (OHIF#5202)

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* feat(viewport): Enhance Orientation Menu with Reformat Option and UI Improvements (OHIF#5184)

Co-authored-by: Joe Boccanfuso <joe.boccanfuso@radicalimaging.com>
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* fix(panels): Allow for setting the initial and minimum expanded widths of each side panel. (OHIF#5207)

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* fix(segmentation): Removed LOAD/hydrate button for segmentation overlays (OHIF#5214)

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* fix(TMTV): The TMTV CSV file now has the correct name and contents (OHIF#5215)

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* fix(segmentation): Fix segmentationid undefined 5106 (OHIF#5107)

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* fix(DicomUpload): Fix upload form and some scrollbars styles (OHIF#5125)

* fix(black-viewports): MPR viewports were turning black if their parent stack had it's properties reset (OHIF#5219)

* fix(viewportgrid): don't subscribe to duplicate event listeners (OHIF#5218)

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* fix: image slices are displayed in reverse order, if we switch from common layout to 2D MPR (OHIF#5022)

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* fix(multimonitor): Study browser more menu fixes (OHIF#5208)

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* fix: labelmap init (OHIF#5228)

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* fix(security): Pin eslint-config-prettier and eslint-plugin-prettier versions. (OHIF#5234)

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* fix(docs): Added entry for the showStudyList configuration setting. (OHIF#5235)

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* feat(segmentation): Add customization for handling missing referencedDisplaySetInstanceUID for the SEG/RTSTRUCT. (OHIF#4983)

* chore(version): version.json [skip ci]

* chore(version): Update package versions [skip ci]

* chore(deps): bump form-data from 4.0.3 to 4.0.4 (OHIF#5244)

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* chore(version): version.json [skip ci]

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* fix(docs): Added docs for multimonitor and local linking (OHIF#5247)

* fix(security): Removed stylus package due to potential security vulnerability and we don't use it. (OHIF#5250)

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* fix(ViewportOrientationMarkers): round rotation to fix floating point issue (OHIF#5135)

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* fix: disable seg download/export buttons until a user has drawn something (OHIF#4953)

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* fix(calibration): do not override user set calibration (OHIF#5231)

Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>

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* chore(deps): bump axios from 1.10.0 to 1.11.0 (OHIF#5252)

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* Handle 200 status response and add default error handling (OHIF#5227)

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* fix: issue introduced from PR 5022 (OHIF#5223)

Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>

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* Fix flaky SEGDataOverlayForUnreferencedDisplaySetNoHydration test. (OHIF#5254)

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* fix(ArrowAnnotate): Allow free-form text for arrow annotations (OHIF#5259)

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* fix: prevent failure in DICOM loader for wadouri type (OHIF#5260)

Signed-off-by: Emmanuel Ferdman <emmanuelferdman@gmail.com>

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* fix(tooltips): tool tips should be portals (OHIF#5265)

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* test(SegmentationPanel): add test for jump to center of segments from PACS and basic add, rename, delete from panel (OHIF#5262)

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* fix(multiframes): Corrected combining frame instances for multiframes. (OHIF#5264)

* fix: null save voi range properties (OHIF#5268)

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* fix(colorbar): Allow for `AdvancedRenderingControls` to be placed at the top or bottom of the viewport. (OHIF#5270)

* chore(version): version.json [skip ci]

* chore(version): Update package versions [skip ci]

* fix(colorbar): Allow for AdvancedRenderingControls to be placed at the left or right of the viewport. (OHIF#5273)

* chore(version): version.json [skip ci]

* chore(version): Update package versions [skip ci]

* feat: improve segment label (OHIF#5217)

Co-authored-by: Joe Boccanfuso <joe.boccanfuso@radicalimaging.com>

* chore(version): version.json [skip ci]

* chore(version): Update package versions [skip ci]

* Adds containsAll validator (OHIF#5279)

* chore(version): version.json [skip ci]

* chore(version): Update package versions [skip ci]

* feat: add support to scoord3d (OHIF#5016)

Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>

* chore(version): version.json [skip ci]

* chore(version): Update package versions [skip ci]

* fix(annotation): Add command to show pleura percentage in USAnnotationPanel and update condition for BLinePleuraPercentage (OHIF#5297)

* chore(version): version.json [skip ci]

* chore(version): Update package versions [skip ci]

* chore: release 3p11

* chore(version): version.json [skip ci]

* chore(version): Update package versions [skip ci]

* chore: 3.11 Recovery 1 (OHIF#5514)

* chore(version): version.json [skip ci]

* chore(version): Update package versions [skip ci]

---------

Signed-off-by: dependabot[bot] <support@github.com>
Signed-off-by: Emmanuel Ferdman <emmanuelferdman@gmail.com>
Co-authored-by: ohif-bot <danny.ri.brown+ohif-bot@gmail.com>
Co-authored-by: Alireza <ar.sedghi@gmail.com>
Co-authored-by: Dan <12800016+rinslow@users.noreply.github.com>
Co-authored-by: Dan Elkis <dan.elkis@signalpet.com>
Co-authored-by: Pedro Köhler <pedrokohlerbh@gmail.com>
Co-authored-by: Joe Boccanfuso <109477394+jbocce@users.noreply.github.com>
Co-authored-by: Ibrahim <93064150+IbrahimCSAE@users.noreply.github.com>
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Wespi <pwespi@pm.me>
Co-authored-by: Vinícius Alves de Faria Resende <viniciusfariaresende@gmail.com>
Co-authored-by: Joe Boccanfuso <joe.boccanfuso@radicalimaging.com>
Co-authored-by: rodrigobasilio2022 <114958722+rodrigobasilio2022@users.noreply.github.com>
Co-authored-by: dxlin <dxlin@users.noreply.github.com>
Co-authored-by: Celian-abd <101793092+Celian-abd@users.noreply.github.com>
Co-authored-by: Dan Rukas <dan.rukas@gmail.com>
Co-authored-by: Tang Cheng <45505657+tctco@users.noreply.github.com>
Co-authored-by: Salim Kanoun <salim.kanoun@gmail.com>
Co-authored-by: Vishnu Suresh Perumbavoor <63797249+vishnusureshperumbavoor@users.noreply.github.com>
Co-authored-by: Alexey Klimovich <alexeyklimovich@gmail.com>
Co-authored-by: arul-trenser <arul.mozhi@trenser.com>
Co-authored-by: Teo Udovčić <65370281+deepnothing@users.noreply.github.com>
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Co-authored-by: Emmanuel Ferdman <emmanuelferdman@gmail.com>
Co-authored-by: Mateus Cota <mateus.cota@cfaz.net>
Co-authored-by: Will <70962569+WillianVarela@users.noreply.github.com>
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