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Hi have installed and build Db from the below link tutorial.
https://www.youtube.com/watch?v=In56LDyNbpI
https://github.com/vappiah/bioinformatics-tutorials/tree/main/software-installation/krona-tools
and i ran below commands
kraken2 --db Kraken2_Db --threads 6 --use-names --report kraken2_report.txt --output kraken2_output.txt 23.fastq
bracken -d Kraken2_Db -i kraken2_report.txt -o bracken_output.txt -r 300 -l S
ktImportTaxonomy bracken_output.txt -o B07_Krona.html
its generating HTML report, but my sample has 70% EBOLA species as per krona and braken , but in HTML report its not reflecting EBOLA virus as majority instead its show root and bacterial abundances like 0-1-3% of different species though my braken kraken has 3 different roots , bacteria, cellular and Viral, Eukaryotes.
Is there anything i am doing wrong or if anything or build database wrong,, Please, I am new to Krona Plots.
Thanks
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