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Toolbox for handling X-ray transmission image data collected using the Xradia TXM system.
We are constantly updating the code to implement other file formats as well - suggestions are welcome.
Main articles:
-) TXM-Wizard: a program for advanced data collection and evaluation in full-field transmission X-ray microscopy, Journal of Synchrotron Radiation, 19, 281-287. (2012)
http://scripts.iucr.org/cgi-bin/paper_yard?hf5192
-) 3D elemental sensitive imaging using transmission X-ray microscopy, Analytical and Bioanalytical Chemistry, Volume 404, Issue 5, pp 1297-1301 (2012)
http://link.springer.com/article/10.1007%2Fs00216-012-5818-9
-) Three-dimensional imaging of chemical phase transformations at the nanoscale with full-field transmission X-ray microscopy, Journal of Synchrotron Radiation, 18, 773-781. (2011)
http://scripts.iucr.org/cgi-bin/paper?ie5055
Features
- Xradia file format support
- FBP and ART tomo reconstruction
- Command script generation for different experimental designs
- TXM XANES imaging data analysis
- PCA and k-means clustering of TXM XANES data
Project Samples
