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Job:
Lab Head positions at the WEHI, Melbourne, Australia
JobPosting
Bioconductor
11 hours ago
Gordon Smyth
52k
0
votes
2
replies
7.5k
views
Bioconductor version cannot be validated
Bioconductor
Annotation
Ann
updated 1 day ago by
Hadi
• 0 • written 20 months ago by
Aytaç
• 0
0
votes
0
replies
89
views
GBCC2025: New Scholarship Opportunities Available!
Community
Conference
GBCC2025
Bioconductor
14 days ago
Maria Doyle
▴ 100
0
votes
1
reply
257
views
Best tximport quant.genes.sf
tximport
tximeta
Bioconductor
updated 24 days ago by
ATpoint
★ 4.9k • written 25 days ago by
yob4003
• 0
0
votes
2
replies
686
views
Version conflict when pushing to scQTLtools devel branch
Bioconductor
written 7 weeks ago by
XFWu
• 0
1
vote
5
replies
1.5k
views
Package developing and interoperation with Bioconductor
Package
Bioconductor
written 9 weeks ago by
slizchap
• 0
0
votes
6
replies
1.9k
views
News:
EuroBioC2024 abstract submission is open!
Conference
Bioconductor
EuroBioC2024
written 15 months ago by
Maria Doyle
▴ 100
0
votes
1
reply
511
views
News:
List of Deprecated Packages for Bioc3.20
Release
Devel
Bioconductor
7 months ago • updated 9 weeks ago
shepherl
4.1k
0
votes
0
replies
329
views
News:
EuroBioC2025: Abstract Submissions Open!
EuroBioC2025
Community
Conference
Bioconductor
3 months ago
Maria Doyle
▴ 100
0
votes
6
replies
1.6k
views
News:
EuroBioC2023 abstract submission is open!
presentation
EuroBioC2023
Conference
community
Bioconductor
updated 21 days ago by
eilishhill8
• 0 • written 2.3 years ago by
Maria Doyle
▴ 100
0
votes
3
replies
484
views
batch effect removal for agilent microarray data
"
"Bioconductor"
Bioconductor
3 months ago
gaye.yilmaz
• 0
0
votes
0
replies
248
views
Job:
Research Software Engineer - Bioconductor tools for biological data science and AI
Bioconductor
3 months ago
Wolfgang Huber
★ 13k
0
votes
5
replies
1.5k
views
For some reason I can't update BiocManager to 3.20
Bioconductor
updated 3 months ago by
shepherl
4.1k • written 3 months ago by
azm.ana2
• 0
0
votes
0
replies
192
views
News:
GBCC2025 Abstract Submissions & Registration Now Open!
Community
Conference
GBCC2025
Bioconductor
3 months ago
Maria Doyle
▴ 100
0
votes
0
replies
150
views
News:
Announcing the GBCC2025 Logo Design Winner!
Community
Conference
GBCC2025
Bioconductor
4 months ago
Maria Doyle
▴ 100
1
vote
0
replies
393
views
News:
Bioconductor Course, Kenya 2025: Applications Open!
Events
Community
Training
Africa
Bioconductor
4 months ago
Maria Doyle
▴ 100
0
votes
3
replies
1.4k
views
News:
EuroBioC2023 abstract submission closing soon!
presentation
EuroBioc2023
Conference
community
Bioconductor
written 2.1 years ago by
Maria Doyle
▴ 100
0
votes
2
replies
458
views
Build error on kunpeng2 Linux aarch64
Bioconductor
updated 5 months ago by
wise
• 0 • written 5 months ago by
Hongxiang
• 0
2
votes
1
reply
677
views
bioconductor packages on bioconda
Bioconductor
updated 6 months ago by
James W. MacDonald
68k • written 6 months ago by
risch.vinzent
• 0
1
vote
3
replies
841
views
Allele frequencies for ALL alleles of one SNP ?
Bioconductor
6 months ago
Abiologist
• 0
10
votes
7
replies
2.1k
views
Why in Bioconductor community people rarely upvote questions?
bioconductor
updated 6 months ago by
shepherl
4.1k • written 2.3 years ago by
L
▴ 50
1
vote
0
replies
996
views
News:
Bioconductor 3.20 is Released!
Bioconductor
Release
Software
7 months ago
shepherl
4.1k
0
votes
0
replies
370
views
News:
Announcing the GBCC2025 Logo Design Contest!
Conference
Community
Galaxy
GBCC2025
Bioconductor
7 months ago
Maria Doyle
▴ 100
1
vote
3
replies
991
views
Tutorial regarding metabolomics with R
Bioconductor
Metabolomics
xcms
updated 7 months ago by
James W. MacDonald
68k • written 7 months ago by
abhisek001
• 0
1
vote
2
replies
856
views
DESeq2 design and contrasts with 2 drug-treated and one control group
DESeq2
Bioconductor
updated 8 months ago by
Michael Love
43k • written 8 months ago by
JT
▴ 10
0
votes
0
replies
354
views
News:
Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries
Community
Teaching
Bioconductor
8 months ago
Maria Doyle
▴ 100
2
votes
9
replies
1.4k
views
Can't post a question?
Bioconductor
updated 11 weeks ago by
DavideSant
• 0 • written 8 months ago by
blmurphy
• 0
2
votes
2
replies
611
views
How to read OSCA book?
BIOCON
OSCA
Bioconductor
8 months ago
zr
• 0
1
vote
2
replies
590
views
WARNING: No Bioconductor dependencies detected.
Bioconductor
Biocon
8 months ago
katja.danielzik
• 0
0
votes
3
replies
713
views
concentration tables suitable as input for new packages?
Bioconductor
written 8 months ago by
katja.danielzik
• 0
2
votes
0
replies
814
views
News:
Save the Date for EuroBioC2025 in Barcelona!
EuroBioC2025
Conference
Bioconductor
Community
8 months ago
Maria Doyle
▴ 100
0
votes
5
replies
1.2k
views
ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
Bioconductor
clusterProfiler
updated 8 months ago by
Lluís Revilla Sancho
▴ 760 • written 8 months ago by
semra
• 0
0
votes
3
replies
1.7k
views
News:
Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
Conference
Bioconductor
Community
updated 16 days ago by
nytwordlehints
• 0 • written 9 months ago by
Maria Doyle
▴ 100
0
votes
1
reply
1.8k
views
Unable to install/use limma
limma
Bioconductor
updated 9 months ago by
James W. MacDonald
68k • written 9 months ago by
Jennifer
• 0
1
vote
2
replies
541
views
Review process for delivering R packages
Bioconductor
9 months ago
XFWu
• 0
0
votes
1
reply
570
views
News:
BioCAsia 2024 Registration Now Open!
BioCAsia2024
Conference
Community
Bioconductor
9 months ago
Maria Doyle
▴ 100
1
vote
3
replies
1.3k
views
Non-zero exit status error when installing GenomeInfoDbData
DECIPHER
GenomeInfoDbData
Bioconductor
GenomeInfoDb
written 9 months ago by
dbjohnson7
• 0
0
votes
0
replies
529
views
Job:
PhD position: Analysis of epistatic interactions in enzymes using long-read sequencing data
NGS
AI
Bioconductor
updated 9 months ago by
Tyler Sagendorf
▴ 10 • written 9 months ago by
Gerhard Thallinger
▴ 180
0
votes
0
replies
394
views
BioCAsia 2024 Abstract Deadline - August 26th
BioCAsia2024
Community
Conference
Bioconductor
9 months ago
Maria Doyle
▴ 100
0
votes
0
replies
489
views
News:
EuroBioC Updates: Important Deadlines
Conference
EuroBioC2024
Bioconductor
Community
EuroBioC
9 months ago
Maria Doyle
▴ 100
2
votes
4
replies
655
views
Bioconductor Submission question
Bioconductor
9 months ago
XFWu
• 0
0
votes
0
replies
390
views
News:
Annual Nominations Open for CAB and TAB! Deadline Aug 31
TAB
CAB
Bioconductor
9 months ago
shepherl
4.1k
0
votes
0
replies
402
views
EuroBioC2024 Flashtalks & Birds-of-a-Feather Sessions - submissions open!
Community
Conference
Bioconductor
EuroBioC2024
10 months ago
Maria Doyle
▴ 100
0
votes
4
replies
980
views
featureCounts error: Assertion `numOfBuckets > 0' failed
featureCounts
Subread
Bioconductor
10 months ago
Jessica
• 0
1
vote
0
replies
703
views
News:
Bioconductor Package Download Rate Limitation (HTTP 429)
downloads
http429
http
Bioconductor
10 months ago
shepherl
4.1k
0
votes
2
replies
1.2k
views
Installing Bioconductor
Bioconductor
updated 10 months ago by
Lluís Revilla Sancho
▴ 760 • written 10 months ago by
mariyahgeorge14
• 0
0
votes
0
replies
448
views
News:
EuroBioC2024 Carpentries workshops Sep 2-3
Community
Workshop
Bioconductor
EuroBioC2024
10 months ago
Maria Doyle
▴ 100
0
votes
0
replies
449
views
News:
BioC2024 in-person registration closes soon (July 10)
BioC2024
Conference
Bioconductor
Community
11 months ago
Maria Doyle
▴ 100
0
votes
0
replies
557
views
Difference in Predictive component of PLS and OPLS Model
Metabolomics
plotGrouper
Bioconductor
ropls
PLSDAbatch
11 months ago
devarti.mahakalkar
• 0
0
votes
3
replies
791
views
How to search Pubmed Central or other fulltext literature base using regex?
metaMSdata
Bioconductor
11 months ago
Abiologist
• 0
50 results • Page
1 of 1
Recent ...
Replies
Answer: Deseq2 paired sample in the design is considered as "batch"?
by
ATpoint
★ 4.9k
It's the same. The analysis will be run with adjustment for the donor differences. Technically, that's the same as a batch, being an unwant…
Answer: Biological replicates consideration in DESeq2 design formula.
by
ATpoint
★ 4.9k
You clearly see that the PCA is dominated by the effect of "replicate", that is what people often call "batch effect", so unwanted technica…
Comment: Could we detect difference at pathway level but not significant different at gen
by
purnell
• 0
You are absolutely right, and ChatGPT4's comment is accurate: yes, it's entirely possible to find differentially behaving pathways with GSV…
Comment: Position of the legend object in complexHeatmap
by
caroline.zanchi
▴ 10
I stay away from Rstudio in general too :) I remember having tried something similar without success. When I do ```r draw(pd, x = unit(0…
Comment: Position of the legend object in complexHeatmap
by
James W. MacDonald
68k
There is a 'just' argument for `draw` that has as its default 'center'. Getting to the corresponding help page is not intuitive though. If …
Votes
Answer: Biological replicates consideration in DESeq2 design formula.
Biological replicates consideration in DESeq2 design formula.
Biological replicates consideration in DESeq2 design formula.
Answer: limma duplicateCorrelation appropriate where some blocks cross condition and som
can't open mghp.osn.xsede.org
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