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  • Bayesian Analysis with Python: A practical guide to probabilistic modeling

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Bayesian Analysis with Python: A practical guide to probabilistic modeling

4.7 out of 5 stars (46)

Purchase options and add-ons

Learn the fundamentals of Bayesian modeling using state-of-the-art Python libraries, such as PyMC, ArviZ, Bambi, and more, guided by an experienced Bayesian modeler who contributes to these libraries.

Free with your book: DRM-free PDF version + access to Packt's next-gen Reader*

Key Features

  • Conduct Bayesian data analysis with step-by-step guidance
  • Gain insight into a modern, practical, and computational approach to Bayesian statistical modeling
  • Enhance your learning with best practices through sample problems and practice exercises
  • Purchase of the print or Kindle book includes a free PDF eBook.

Book Description

The third edition of Bayesian Analysis with Python serves as an introduction to the main concepts of applied Bayesian modeling using PyMC, a state-of-the-art probabilistic programming library, and other libraries that support and facilitate modeling like ArviZ, for exploratory analysis of Bayesian models; Bambi, for flexible and easy hierarchical linear modeling; PreliZ, for prior elicitation; PyMC-BART, for flexible non-parametric regression; and Kulprit, for variable selection.

In this updated edition, a brief and conceptual introduction to probability theory enhances your learning journey by introducing new topics like Bayesian additive regression trees (BART), featuring updated examples. Refined explanations, informed by feedback and experience from previous editions, underscore the book's emphasis on Bayesian statistics. You will explore various models, including hierarchical models, generalized linear models for regression and classification, mixture models, Gaussian processes, and BART, using synthetic and real datasets.

By the end of this book, you’ll understand probabilistic modeling and be able to design and implement Bayesian models for data science, with a strong foundation for more advanced study.

*Email sign-up and proof of purchase required

What you will learn

  • Build probabilistic models using PyMC and Bambi
  • Analyze and interpret probabilistic models with ArviZ
  • Acquire the skills to sanity-check models and modify them if necessary
  • Build better models with prior and posterior predictive checks
  • Learn the advantages and caveats of hierarchical models
  • Compare models and choose between alternative ones
  • Interpret results and apply your knowledge to real-world problems
  • Explore common models from a unified probabilistic perspective
  • Apply the Bayesian framework's flexibility for probabilistic thinking

Who this book is for

If you are a student, data scientist, researcher, or developer looking to get started with Bayesian data analysis and probabilistic programming, this book is for you. The book is introductory, so no previous statistical knowledge is required, although some experience in using Python and scientific libraries like NumPy is expected.

Table of Contents

  1. Thinking Probabilistically
  2. Programming Probabilistically
  3. Hierarchical Models
  4. Modeling with Lines
  5. Comparing Models
  6. Modeling with Bambi
  7. Mixture Models
  8. Gaussian Processes
  9. Bayesian Additive Regression Trees
  10. Inference Engines
  11. Where to Go Next

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From the Publisher

B21028- 1
B21028 - author

How has your experience in Bayesian analysis helped you write this book? ​

Through my work at The National Scientific and Technical Research Council (CONICET) in Argentina and my experience collaborating with global researchers and developers, I have acquired an excellent understanding of the intricacies of computational methods for Bayesian statistics and probabilistic programming. My involvement in various open-source projects, including ArviZ, Bambi, Kulprit, PreliZ, and PyMC, moreover, has enabled me to incorporate practical, real-world applications of Bayesian analysis, enriching the content and ensuring its relevance to contemporary research and industry needs. With my prior teaching experience, I have been able to craft the book to cater to readers who are new to the field, fostering a learning experience that promotes a deeper understanding of the subject matter. ​

B21028 - 3

What is new in this edition?

In this latest edition, I’ve made significant updates and improvements to enhance the learning experience for readers. This edition extensively incorporates the latest versions of PyMC and ArviZ, emphasizing their newest and most advanced features. Additionally, four new libraries from the PyMC ecosystem—Bambi, Kulrprit, PreliZ, and PyMC-BART—have been introduced, significantly expanding the book's scope. I’ve also included dedicated chapters to offer practical insights and real-world applications specifically for Bambi and PyMC-BART, allowing readers to delve deeper into these libraries and apply them effectively in various scenarios.

B21028 - 3

What makes this book different from other Bayesian Analysis titles?​

I’ve written this book with the emphasis on prioritizing practical application and conceptual understanding over a purely mathematical approach. By including both synthetic and real-world examples, I’ve attempted to enrich the learning experience, using synthetic cases to explain concepts and real examples to demonstrate practical applications. This way, the book promotes active engagement through exercises, fostering a hands-on learning experience for Python enthusiasts eager to master Bayesian analysis.

Bayesian Analysis with Python - Third Edition
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Customer Reviews
4.7 out of 5 stars 46
4.1 out of 5 stars 52
4.9 out of 5 stars 47
Description Introduces Bayesian analysis with PyMC and ArviZ, and four new libraries from the PyMC ecosystem, offering practical insights and real-world applications​ Introduces Bayesian statistics with enhanced practicality, utilizing PyMC3 and ArviZ to master various models, from hierarchical to Gaussian processes​ Master pandas 2.x with practical recipes for structured data manipulation, analysis, and performance tuning
Libraries PyMC, ArviZ, Bambi, PreliZ, Kulprit, and PyMC-BART​ PyMC3 and ArviZ​ pandas, NumPy, PyArrow, Jupyter Notebook
Topics Bayesian additive regression trees (BART), non-parametric regression, variable selection, and prior elicitation​ Generalized linear models for regression and classification, mixture models, hierarchical models, and Gaussian processes​ Structured data, data manipulation, I/O, performance, idiomatic pandas, visualization, time series

Editorial Reviews

Review

“As we present this new edition of Bayesian Analysis with Python, it's essential to recognize the profound impact this book has had on advancing the growth and education of the probabilistic programming user community. Osvaldo Martin, a teacher, applied statistician, and long-time core PyMC developer, is the perfect guide to help readers navigate this complex landscape. He provides a clear, concise, and comprehensive introduction to Bayesian methods and the PyMC library. We trust that this book will be a valuable companion in your exploration of Bayesian modeling and a catalyst for your contributions to this dynamic field.”

Christopher Fonnesbeck, PyMC's original author

Thomas Wiecki, CEO & Founder of PyMC Labs



“I was lucky enough to review the 3rd edition of Bayesian Analysis with Python by Osvaldo Martin. If you are interested in Bayesian statistics and have some knowledge of Python, this is your book. It's easy to read, has good examples, and all the code public. I was lucky enough to review the 3rd edition of Bayesian Analysis with Python by Osvaldo Martin. If you are interested in Bayesian statistics and have some knowledge of Python, this is your book. It's easy to read, has good examples, and all the code public.”

Tomas Capretto, Principle Data Scientist, PyMC Labs, Open Source Software Developer, Bambi



“I had the privilege to review the latest edition of the great book: "Bayesian Analysis with Python - Third Edition: A Practical Guide to Probabilistic Modeling" by Osvaldo Martin. I can only recommend this book to anyone interested in modern Bayesian practical methods with PyMC.

I wish you a great journey securing your APIs, with Defending APIs by your side!”

Dr Juan Camilo Orduz, Mathematician, Sr Data Scientist, PyMC and PyMC-Marketing Open Source Core Contributor)

About the Author

Osvaldo Martin is a researcher at CONICET, in Argentina. He has experience using Markov Chain Monte Carlo methods to simulate molecules and perform Bayesian inference. He loves to use Python to solve data analysis problems. He is especially motivated by the development and implementation of software tools for Bayesian statistics and probabilistic modeling. He is an open-source developer, and he contributes to Python libraries like PyMC, ArviZ and Bambi among others. He is interested in all aspects of the Bayesian workflow, including numerical methods for inference, diagnosis of sampling, evaluation and criticism of models, comparison of models and presentation of results.

Product details

  • Publisher ‏ : ‎ Packt Publishing
  • Publication date ‏ : ‎ January 31, 2024
  • Edition ‏ : ‎ 3rd
  • Language ‏ : ‎ English
  • Print length ‏ : ‎ 394 pages
  • ISBN-10 ‏ : ‎ 1805127160
  • ISBN-13 ‏ : ‎ 978-1805127161
  • Item Weight ‏ : ‎ 1.49 pounds
  • Dimensions ‏ : ‎ 7.5 x 0.89 x 9.25 inches
  • Best Sellers Rank: #479,014 in Books (See Top 100 in Books)
  • Customer Reviews:
    4.7 out of 5 stars (46)

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Osvaldo Martin
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