E Chem Manual
E Chem Manual
1 . 5
EChem
Users Guide
& using Chart & Scope software for
Electrochemistry
Please check for the release of the EChem v2 manual on the
eDAQ web site at [Link]
PowerLab System
[Link]
Trademarks of ADInstruments
MacLab and PowerLab are registered trademarks
of ADInstruments Pty Ltd. Specic model names
of data recording units, such as MacLab/8e and
PowerLab/400, are trademarks of ADInstruments
Pty Ltd.
Chart, EChem, Histogram, Peaks, Scope,
DoseResponse, UpdateMaker, and UpdateUser
(software), and PowerChrom (software and
hardware) are trademarks of ADInstruments Pty
Ltd.
Other Trademarks
ii
Contents
Contents
The Axes 40
Dragging and Stretching the Axes 42
Graph Lines, Patterns & Colors 43
Navigating 44
Overlaying Pages 45
The Zoom Window 47
Display and Printer Resolution 49
Making Measurements 50
Using the Marker 50
Setting and Removing Baselines 51
The Marker Miniwindow 52
Background Subtraction 54
The Data Pad 55
Adding Data to the Data Pad 57
Setting Up the Columns 57
Data Pad Miniwindow 59
Printing the Data Pad 59
Computed Functions 59
Sampling Speed 60
Channel Functions 61
Math 62
Function 63
The Notebook 64
The Page Comment window 65
iii
1 Getting Started
2 EChem Basics
An Overview of EChem 10
Opening an EChem File 12
Closing or Quitting an EChem File 14
The Main Window 14
Recording 19
3 Setting Up EChem
23
Selecting Data 68
Editing Data 68
Transferring Data 69
Measuring From the Waveform 71
Using the Marker 72
37
67
iii
6 Customizing EChem
87
Preferences 88
Menus 88
Controls 90
Options 91
Start-Up 92
Emergency Access! 92
Macros 94
Recording a Macro 95
Playing a Macro 96
Deleting a Macro 96
Macros That Call Other Macros 97
Options When Recording Macros 98
Macro Commands 101
7 EChem Techniques
107
Introduction 108
General Considerations 110
Linear Sweep Voltammetry 116
Square Wave Voltammetry 121
Normal Pulse Voltammetry 126
Differential Pulse Voltammetry 130
Stripping Techniques 135
Cyclic Voltammetry 140
MultiPulse Voltammetry 146
MultiPulse Amperometry 154
The Apply Technique... command 159
Polarographic Techniques 160
8 Additional Techniques
Chronocoulometry 173
Chronopotentiometry 175
The Potentiostat as a Galvanostat 175
Controlled Potential Electrolysis 178
Controlled Current Electrolysis 179
Rotating Ring Disk Electrodes 180
Amperometric Titrimetry 180
Liquid Chromatography Detectors 181
Biosensors 182
Potentiometric sensors 182
pH Electrodes 182
Ion Selective Electrodes 183
Potentiometric Redox Electrodes 184
Dissolved CO2 and NH3 Electrodes 184
Electrode Behaviour 184
Multiple Point Calibration 185
pH and ISE Calibration 189
Temperature Compensation 194
Isopotential Point 196
Potentiometric Titrimetry 197
Dissolved Oxygen, dO2, Sensors 198
Conductivity Sensors 198
Simple Galvanic Cells 199
Quartz Crystal Microbalance 200
Electrochemical Noise Experiments 200
Corrosion Measurements 201
161
Introduction 162
AC Voltammetry 163
Fast Scan Techniques 163
Low Current Experiments 166
Chronoamperometry 167
iv
205
Appendices
A Menus & Commands
223
Menus 223
Keyboard Shortcuts 226
B Troubleshooting
227
C Technique Summary
Bibliography
241
D Electrochemical Equations
Glossary
281
249
Index
285
Chapter Contents
273
295
vi
C H A P T E R
O N E
Getting Started
Welcome to the ADInstruments PowerLab/EChem electrochemistry
system. EChem software lets you use your computer* and PowerLab
analog-to-digital interface unit as an electrochemistry workstation
suitable compatible with a wide variety of potentiostats and patch
and voltage clamps. EChem causes the PowerLab unit to generate the
potential waveform for most staircase ramp and pulse voltammetric
techniques, as well as pulsed amperometric experiments, samples
and signal averages the current signal at appropriate times, and
displays the results in real time. Chapter 7 has a full description of the
techniques available. In addition, when used with the ADInstruments
Potentiostat, full software control of gain ranges, lter settings and
polarity convention is available.
*. EChem software, version 1.5, is suitable for use with Macintosh, Windows 95,
98, NT, 2000 or Me computers.
Note
The pictures used as
illustrations in this guide
are from a monochrome
monitor. There may be
slight differences in
appearance when using
EChem on a greyscale or
color monitor.
Computer Requirements
Your particular needs will determine the computing requirements
and hence which model of computer you use. Your ADInstruments
representative will be happy to discuss your requirements and
suggest suitable congurations.
Apple Macintosh
Minimum: The minimum requirement is a Macintosh computer with
a 68020 microprocessor and a hard disk, System 7, 8MB RAM, and a
13 inch monitor. If you own an early model Apple Macintosh then we
can supply EChem version 1.3 on request. Although EChem 1.3 has
fewer features than EChem 1.5, it will run even on early model 68000
Apple Macintosh computers with System 6 or System 7, and on
computers with 9 or 12 inch black and white or color monitors (for
example a Mac SE with system 6 will happily run EChem version
1.3). Data les collected with EChem 1.3 can also be opened with
EChem 1.5.
Note
Owners of Apple
Macintosh PowerBooks
will need a suitable SCSI
cable or adaptor, available
from your computer
dealer, to connect the
PowerBook to the
PowerLab unit. Recent
Macintosh models have a
USB port which can be
used as an alternative to
the SCSI connection with
PowerLab units with USB
ports.
Chart and Scope software, versions 3.3.8, are also available for use
with PowerLab units used with early model Apple Macintosh
computers.
Recommended: a Power Macintosh G3, with a hard disk, System 8,
32 MB RAM, and a 14-inch or larger color monitor.
Printers: there are numerous printers available that can be used to
produce reports from EChem. Some recommended printers are: the
Apple Color StyleWriter 2500, a color inkjet printer producing high
quality color printouts at near laser printer quality; and the Apple
LaserWriter series. If you buy a laser printer ensure that it has true
PostScript capability which will ensure that you get the highest
quality graphic output for plotting your results.
Microsoft Windows
Note
Your Windows computer
will need a suitable SCSI
card and cable to connect
to the PowerLab unit.
Depending an your
computer you may need
an ISA, PCI or PCMCIA
SCSI card, available from
ADInstruments or your
local computer supplier.
Old SCSI cards originally
installed in Windows 3
computers will probably
not work.
Optional Analysis
For general purpose data analysis and the production of specialist
plots for theses, reports, slides, and publications we recommend IGOR
Pro software (WaveMetrics). Other suitable graphing software
includes Origin (Microcal) and Kaleidagraph (Synergy).
Installation Instructions
You will have been provided with a CD ROM which contains the
EChem installer software. If your computer does not have CD ROM
capability then contact your ADInstruments representative who can
arrange installation from a set of oppy disks. You will need at least 3
MB of free space on your hard disk for the installation. It is
recommended that you rst install the Chart and Scope software that
also came with your PowerLab system. To install EChem:
1. Insert the EChem PowerLab CD ROM into the appropriate drive.
2. Double click the installer icon.
The installation creates an EChem folder (directory) in which you will
nd the EChem program and sample data les. On Macintosh
systems the Potentiostat driver software is also placed in the
ADInstruments folder in the System Folder. On a Windows system
the Potentiostat driver is part of the EChem software. This driver is
only required if you are using the ADInstruments Potentiostat.
If you have used an earlier version of EChem it is strongly
recommended that you remove these versions from your Macintosh
hard disk before you install EChem 1.5. On Windows systems older
versions of software will be automatically uninstalled. Data les from
earlier versions of EChem will open with EChem version 1.5. If there
are multiple versions of a program present on your hard disk then
you may accidentally use the older version for your experiments.
Keep your installer CD ROM in a safe place after the installation.
Please remember that each purchased copy only licenses you to use
the software on one computer at any one time. Please enquire about a
costsaving departmental license if you want to run multiple copies
in your workplace.
When you start EChem for the rst time, a dialog box will appear
(Figure 12), asking you to name the copy of the application. If the
computer has an owners name already assigned (for le sharing),
then the name will be put into the Name box. Just start typing if you
want to overwrite it.
If the PowerLab unit is not connected, then the dialog box in Figure 1
3 will appear. If this dialog box appears when the PowerLab unit is
properly connected and turned on, see the Owners Guide that came
with your PowerLab for help. Some of the information about start-up
problems from the Owners Guide is also repeated in Appendix B at
the back of this manual.
The PowerLab is not connected or not turned
on. Click on the Analysis button to open a data
le for further analysis or for printing.
Quitting EChem
If you want to exit EChem after naming your copy of the software,
choose Quit from the File menu. If you want to proceed, working
through this guide, you can leave the le open.
C H A P T E R
T W O
EChem Basics
EChem is a sophisticated program for performing voltammetric and
amperometric electrochemical experiments. This chapter provides a
general overview of EChem, looks at the main graphic window, and
deals with the basics of recording data.
An Overview of EChem
EChem, together with the PowerLab hardware and computer, gives
you the display capabilities of a two-channel storage oscilloscope, as
well as the features of a versatile waveform generator. You can
perform a variety of electrochemical techniques with any potentiostat
that has an external input and analog (XY, or chart recorder) outputs.
Display ControlsChapter 4
Your results are displayed in the main EChem window which can be
resized, and the control panels moved to where you want them. The
data display can be set to show I (current), E (potential) and t (time)
in different formats:
I vs E, with I on the Y and E on the X axis.
E vs I, with E on the Y axis and I on the X axis.
I and E on separate graphs versus time.
I versus time (for amperometric experiments).
The current and potential axes can be dragged, stretched, or set to
exact values for optimum data display. The current range can be
adjusted. If an ADInstruments Potentiostat is connected then its
controls can also be accessed through the software. Display colors,
patterns, and grids can be altered.
10
11
Figure 21
EChem desktop icons:
double-click one to open
EChem
12
Radio buttons
Figure 22
The Open file dialog box
Check boxes
Appearance may vary (as shown)
depending your computer and
operating system. Radio buttons are
full when on and empty when off.
Check boxes show a tick or cross
when on, and are empty when off.
between opening EChem les, or ASCII text les which may have
come from other electrochemical systems. Only the selected type of
le is displayed in the scrolling list and is able to be opened. The
checkboxes allow you to append a le to a currently open le, to load
the settings of the new le, and whether to discard macros when the
le is opened. Opening text les and appending les are discussed in
Chapter 5.
The information in an EChem le is made up of data and settings.
Data refers to the recorded waveforms, which are normally loaded
when opening a le. Settings are of two types:
1. Recording settings: those that affect recording, such as the
current ranges, technique settingsscan rate, pulse height etc.;
and
2. Display settings: those that affect the way the data looks, such
as the window size, display settings, and menu conguration.
(Macros are also stored in a settings le.)
Note
To start EChem with its
factory default settings,
hold down the Command
key (Macintosh) or
Control key (PC)
immediately after you
start the software by
double-clicking the icon.
Release the key when the
alert box appears, and
click the OK button.
contains no data) with the Load Settings checkbox off will load only
display settings, not those affecting recording of data.
If you have a le open when opening a second le, then the rst le
will be closed. If there are any unsaved changes to the rst le, an
alert box will appear asking if you want to save them before opening
the new le. If the Load Settings checkbox is on, then both the
settings and the data will be loaded, otherwise the current settings
from the rst le are retained.
Using the sample data le as you work through this users guide will
show you some real data and perhaps give a better idea of what is
going on in EChem.
14
File title
Zoom box
Close box
Scale
pop-up
menu
Cursor information
panel
i Channel
control
panel
Range
pop-up
menu
Input
Amplier
dialog
button
Axis label
Technique
description
Vertical space
Marker
Page Comment
button
Page buttons
Scale
pop-up
menu
15
Page Corner
controls
Size box
Start/Stop
button
the zoom box to toggle the EChem window between a set size and the
full size of the screen.
The three control panels (Cursor, i Channel, and Sample) cannot be
resized, but they can be moved independently around the screen if
necessary. Blank panels appear behind the control panels to reduce
clutter: these, too, can be moved.
Navigating
Page Corner controls
Active
page
Blank
page
Scrolling buttons
You can also move a page left or right by pressing, respectively, the
left and right arrow keys on the keyboard. Hold down the Command
(or Control) key while pressing the left or right arrow key to go to the
beginning or the end of the le (the rst or last numbered pages).
16
axis becomes the applied potential (E) and the vertical axis the
recorded cell current (I). This is reversed for the E versus I mode.
Note that the graph area remains blank until some data is actually
recorded. The scale for each axis is initially set by the current range
control on the right side of the window and the chosen technique.
Both i and E axes can be stretched or dragged using the pointer.
Display options can be chosen from the Scale pop-up menu.
The current scale settings are located at the right of the main window.
The control panel is labelled i Channel, Figure 24.
The i Channel panel, controls the current sensitivity and setup of
either the PowerLab Channel 1 input amplier, or the ADInstruments
Potentiostat, if connected.
If you are using the ADInstruments Potentiostat press the Range popup menu to choose the full scale current range (20 nA to 100 mA).
Click on the Potentiostat button to bring up a dialog that allows you
to adjust the Potentiostat settings lters, polarity, dummy/real cell
setting, etc.
If you are using another brand of potentiostat then click the Input
Amplier button to bring up a dialog box to adjust the Channel 1
controls of the PowerLab. The signal for the potentiostat is a voltage
level that represents the current signal. You will have to adjust the
input sensitivity to your potentiostat full scale output (often 1 or 10 V
read the potentiostat manual). For example if you are using a BAS
CV-27 potentiostat, which you have adjusted to a setting of (say) 1
A/V, you will still need to keep the PowerLab i Channel setting at
10 V because this is the maximum output from the plotter
connections of the CV-27, that is, the CV-27 can report currents of up
to 10 A when set at 1 A/V.
17
Cursor Panel
The Cursor panel shows the value of the coordinates of the cursor
position as the pointer is moved over the data display area. For
voltammetric experiments it displays the current (I), potential (E),
and time (t) values which are updated constantly as you move the
cursor along the waveform. For amperometric experiments viewed in
the I vs t mode only time and current are reported. The Cursor
display will be blank if the pointer is not over the waveform display
area. If the Marker (see below) is positioned on the trace then the
differences, , in current, potential, and time between the marker and
cursor positions are also displayed.
The Marker
The marker can be
dragged onto the trace
The Marker can be found in the box at the bottom left of the EChem
window. It can be dragged onto the data display area to a particular
data point on the voltammogram which becomes the zero reference
point. Relative measurements can now be made. Double-clicking the
Marker or clicking its box sends it back home. You can also drag the
marker close to its lair and let go of the mouse button. The marker
will automatically nd its way back.
18
The Page Comment button can be found at the bottom left of the
EChem window, to the right of the Marker. Click it to bring up the
Page Comment window for noting down comments about particular
pages of data, for example you might want to enter the
concentrations of metal ions in a standard solution. When there are
comments noted down for the active page, the button icon changes
from a blank note to a marked one.
Start Button
To start recording, click the Start button in the Sample panel. The
button then changes to Stop click it, if required, to stop recording.
The button may show a dimmed Wait while starting or stopping.
After the rst sweep in a new le you will be asked to save the le.
Second and subsequent sweeps will be automatically saved at the end
of each sweep. This autosave feature can be turned off from the
Preferences/Options command in the Edit menu.
Pointer
The pointer can be a cross,
I-beam, or arrow shape
The pointer will change shape as you move it about the EChem
window, giving you an indication of its function in certain areas it
becomes an I-beam over a text entry area, and a cross in the graph
area, for instance. It becomes dimmed when it cannot effect a function
under particular conditions. Do not confuse the pointer (controlled
by the mouse) with the cursor that follows the pointer when it is in
the data display area, but which remains on the trace. It is the
coordinates of the cursor that are reported in the Cursor Panel, and in
the Data Pad.
Recording
Note
EChem does not record in
the background: it must be
the active (top) application
to function.
19
Length of Recording
The number of pages of data that you can record depends primarily
on the memory that you have allocated to EChem. If you nd that
you run out of memory, you can increase EChems memory allocation
on Macintosh by quitting, selecting the application icon in the Finder,
choosing Get Info from the File menu (or typing Command-I, or
Control-I), and typing a larger value in the Preferred size box. There
is an upper limit of 1000 pages in any one le.
The amount of memory available for recording on Macintosh can be
seen in the lower portion of the EChem dialog box, Figure 25, by
selecting the About EChem command from the Apple () menu
(click the dialog box to make it go away again).
20
Figure 25
The available memory
indicator bar on a Macintosh.
21
22
C H A P T E R
T H R E E
Setting Up EChem
EChem software supports the use of many third party potentiostats
as well as the ADInstruments Potentiostat.
For more information about third party potentiostats see Chapter 12.
23
Connecting to PowerLab
Many commercial potentiostats are suitable for connection to a
PowerLab unit and can be operated with the EChem software. These
instruments must have the ability to accept an external waveform.
You may need to consult Chapter 12 or your potentiostats user
manual to see if an external input is available.
You will need to connect the analog output of the PowerLab to the
external input of the potentiostat. This will usually be located on the
potentiostat front or back panel and will be labelled E in, External
Input, Ext. In., or something similar. Connect the potentiostat
external input to the PowerLab Output + (or Output 1) BNC front
panel connector.
Different manufacturers use opposite conventions about whether a
negative potential corresponds to reduction or oxidation at the
working electrode. If you nd that after connecting to the PowerLab
that your peak potentials are the opposite polarity to that which you
expect (for example a peak is found at +0.25 V when it should be at
0.25 V) then remove the cable from the PowerLab Output + (or
Output 1) connector and attach it to the PowerLab Output (or
Output 2) connector. This reverses the polarity of the potential
waveform signal, which in turn will change a reducing potential to an
oxidising potential (and vice versa) at the working electrode.
24
CAUTION
Do not connect a third
party potentiostat to
channels 1 and 2 at the
front of a PowerLab unit
while an ADinstruments
Potentiostat is connected.
The results obtained will
be very unpredictable.
Similarly if a third party
potentiostat is connected
to a PowerLab unit via the
rear Multiport connector
then the channel 1 and 2
connectors at the front of
the PowerLab should not
be connected to any other
instrument.
In order to record current and potential data you will need to locate
the potential and current outputs located on your third party
potentiostat. These are often labelled as Applied E, App. E, E out,
E monitor, I monitor, I out, or something similar. The current (I)
output of the potentiostat should be connected to the CH1+ connector
of the PowerLab. If you need to sample the potential values, then the
potential (E) output of the potentiostat should be connected to the
CH2+ connector of the PowerLab. Potential monitoring can be done
in EChem in the Multi Pulse method if potential sampling is selected.
For most methods in EChem the potential values that are used for
plotting are the calculated potentials it is assumed that the
potentiostat will accurately follow these. Thus the points are always
exactly evenly spaced along the potential axis. Note, however, that
even if you do not connect the potentiostat to channel 2, EChem still
uses this channel to store the potential values, and thus channel 2
cannot be used for connecting to other instruments.
It is possible to alter the cable that links your potentiostat to the back
of the PowerLab /200 or /400 via the Multiport. Consult the PowerLab
Owners Guide for the functions of the different pins. However, you
should exercise care when modifying such a cable to ensure that
shorts do not occur between channels, or between signal lines and
power rails. Construction of such a cable should only be attempted by
a competent technician. If you have a special requirement then please
contact your ADInstruments representative.
25
Figure 31
Adjusting the i Channel range
to match the output range of
the potentiostat
If you are dealing with very low currents (which do not give full scale
output on the potentiostat, even at its most sensitive settings) you can
try choosing a smaller range from the i Channel range pop-up menu.
This causes the PowerLab unit to amplify the incoming signal and
may give you a better result but bear in mind that any incoming
noise will also be magnied.
You can also adjust the i Channel range inside the Input Amplier
dialog box. This is discussed in the next section.
Signal Display
The input current signal is displayed so that you can see the effect of
changing the settings. Data is not actually being recorded while you
do this as it disappears from the screen it is lost. The incoming
signal value is displayed at the top left of the display area. Slowly
changing signals will be represented quite accurately, whereas very
quickly changing signals will be displayed as a solid dark area
showing only the envelope (shape) of the signal formed by the
minimum and maximum recorded values.
26
Pause/Scroll button
Figure 32
The Input Amplifier dialog box.
Current
Amplitude
axis
PowerLab /200 and /400 Input Amplier Dialog. PowerLab /800 does not have the Positive and
Negative boxes.
Filter:
PowerLab/4SP, /8SP and /16SP Input Amplier Dialog. PowerLab/4SP, also features Positive and
Negative boxes (not shown here).
27
Filtering
PowerLab /200, /400, /800 units can apply a 50 Hz, 2-pole Bessel,
low pass lter to the incoming signal which may aid in the removal of
high frequency noise. With other PowerLab models such as the /4SP,
/8s, and /16s, you can select an appropriate low pass lter (1 Hz to
20 kHz) from a menu, Figure 32. Your Potentiostat may also have
lter settings which can also be used. However, remember that for
28
high speed scans, or for work with short period pulses, you will need
to keep ltering to a minimum.
Units
Clicking the Units button brings up the Units Conversion dialog
box, allowing you to display the signal from the potentiostat in the
correct units of current. This provides an easy way to calibrate the
channel to the range of the potentiostat. Using Units Conversion is
discussed in the next section.
Units Conversion
To bring up the Units Conversion dialog box (Figure 33) click the
Units button in the Input Amplier dialog box.
Units conversion lets you scale the i Channel Axis so that the
incoming current signal from the potentiostat (which is actually a
voltage signal) is displayed in appropriate current units such as mA
or A.
Chapter 3 Setting Up EChem
29
Current units
pop-up menu
Converting Units
Note
There must be a
proportional relationship
between the recorded
voltage and the new units
for the units conversion to
work properly. Most
potentiostats provide such
a signal.
Applied Potential
The applied potential slider control allows you to adjust the control
voltage sent to the external input of the potentiostat. To change the
value simply drag the control left or right to set an appropriate
potential or click on the A-button to enter an exact value.
30
You should see the Potentiostat button at the bottom of the panel. If
the button says Input Amplier then quit, turn off the PowerLab
unit, recheck the Potentiostats connections, and try again. If you are
using a PowerLab/200 or /400 with Multiport connection to the
Potentiostat ensure that there is nothing connected to the CH1 and
CH2 front panel input connectors of the PowerLab unit.
31
Pause Button
Figure 35
The Potentiostat Input
Amplifier dialog box
Signal amplitude
Cell
connection
modes
Applied potential
slider control
Applied potential
slider control
This dialog (Figure 35) allows you to adjust the current range,
ltering and cell connection settings. Galvanostat functions are only
enabled when using Chart or Scope software, see Chapter 8.
Signal Display
The current signal from the connected cell is shown in the scrolling
display area. By using the Dummy or Real modes the effect of an
applied potential can be seen prior to actually recording the data. No
data is actually recorded when the Potentiostat dialog box is open.
When the dialog is closed the signal trace is lost.
You can stop the signal scrolling by clicking the Pause button at the
top right of the display area (it looks like the pause button on a tape
player). It then changes to the Scroll button (like the play button on a
tape player): click it to start scrolling again.
You can shift or stretch the vertical Amplitude axis to make the best
use of the available display area. Apart from being at the right rather
32
than the left, it is the same as the amplitude axis in the main EChem
window.
Filtering
The lter
pop-up
menu
The Potentiostat has a number of low pass lter settings, for removal
of high frequency noise at 10 kHz, 1 kHz, 100 Hz, 50 Hz, and 10 Hz.
The pop-up menu can be used to select the appropriate lter. The 10
Hz setting is very effective in removing 50 or 60 Hz mains hum but be
careful that it does not distort your voltammograms. As a rough
approximation the 10 Hz lter can be used safely for linear sweep or
cyclic voltammograms up to about 100 mV/s, or for pulse techniques
where the pulses are longer than about 100 ms.
For very high speed scans or for work with millisecond pulses you
will need to use the 10 kHz lter setting.
Cell Control
Three modes are provided to control the way in which the
Potentiostat connects to the cell. Each of these modes is analogous to
the settings found on traditional potentiostats.
33
Applied Potential
The applied potential slider control is enabled in either
Dummy or Real modes. It allows you to adjust the voltage
applied to either the dummy cell or external cell
depending on the mode selected. To change the value
simply drag the control left or right to set an appropriate potential
or click on the A-button to enter an exact value.
Reverse Polarity
Depending on your local convention you may wish to dene a more
oxidizing potential at the working electrode as either a more
positive, or as a more negative potential.
If the Reverse Polarity box is crossed then the Potentiostat will
produce oxidizing potentials at the working electrode at more
34
35
36
C H A P T E R
F O U R
37
Figure 41
There are four main display
modes that can be accessed
by the display mode pop-up
menu.
38
Figure 42 Changing
relative heights of the
channels and overlaying
current and potential data in
the IE vs t display mode.
By dragging the channel separator to the top of the window you can
overlay the current and voltage signals the current axis is on the
left, and the potential axis is on the right, Figure 42. Both Y axes can
be shifted and stretched independently to adjust the graphs as
required. The channel separator handle moves to the top right of the
window double-click it to toggle back to separate channel display.
39
The Axes
The limits and direction of the current and potential axes can be set
from the Scale pop-up menu. The button for which, Figure 43, is
located on the left-hand side of the current axis (when it is the Y axis)
or the lower right hand side of the current axis (when it is the X axis,
in E vs I display mode). There is a similar button on the potential axis.
The Bipolar and Single Sided options are disabled if Units Conversion
is already applied.
Location of
the axis
menu
button
Figure 43
Using the current axis
controls. Similar controls are
found on the potential axis.
40
Single Sided. Shifts the axis so that zero is located at the bottom (or
left) of the display area. This option can be used if you wish to view
only current signals larger than zero. Any readings below zero will be
off the screen (to see them, select the Bipolar option). If the axis is in
bipolar display (below) double clicking it will make it single sided
display.
Bipolar. This is the default mode for each channel. It displays zero at
the centre of the axis. Double clicking the axis will make it return to
bipolar display.
Set Scale. This option allows you to adjust the axis directly to display
the range of values you desire. It works whether Units Conversion is
on or off. When you choose Set Scale, the Scale Range dialog box
appears (Figure 43), allowing you to type in directly the lower and
upper limits of the axis to be displayed.
Note that Set Scale is meant for ne-tuning the scale setting rather
than for use as a gross magnication tool, and will allow expansion or
compression to no more than twice the original range chosen, with
neither the upper or lower value being over three times the original
limit. First set the range approximately from the Range pop-up menu
for the channel, and then set the axis to the precise values required. If
you are trying to enlarge very small features you should consider
using the Zoom window, or (preferably) recording the data at a
higher gain.
Invert Axis. This will reverse the direction of the axis. Useful if you
want positive current values to go in the downwards direction (or
towards the left when current is on the X axis). The direction of the
potential axis can also be reversed so that oxidative potentials can be
displayed to the left or right.
Units Conversion Choosing the Units Conversion item brings up
the Units Conversion dialog box (current axis only) which allows you
to readjust the conversion factors for the current signal. You have a
choice of reassigning conversion factors for all the pages in the le of
just for a particular page. See Chapter 3 for more details of Units
Conversion.
Computed Functions Choosing this item is the same as selecting
Computed Functions... from the Display menu, and is discussed more
41
fully later in this Chapter. You can smooth, and perform various
mathematical transformation on the current signal. You can offset the
potential signal (if you want to set a new reference potential).
Figure 45
The Display Settings dialog
box for changing line types
and colors.
Background
buttons
Graticule
buttons
Colour pop-up
menu
42
Line type
buttons
The Color pop-up menus, Figure 46, for the graticule and channels
let you choose the pattern and color of each. Press them to bring up
the options. The choices are the basic system colors; black, red, blue,
green, magenta, cyan, and yellow; and lighter patterns of the solid
colors: gray, light red, and so on. Colors appear as greys on a grayscale monitor. Colors and greys can be printed as well as displayed, if
you have an appropriate printer.
Other Controls
Graticule buttons
Background buttons
The Graticule buttons let you choose the form of the display grid.
Click to select a button it is highlighted with a heavy border. You
can choose to have a dot graticule (the default setting, no graticule at
all, or a line graticule.
The Background buttons let you choose whether the background of
the voltammogram is white or black. Click to select a button it is
highlighted with a heavy border.
The Line type buttons for each channel give you the choice of
displaying the data points joined by lines, as unjoined dots
(individual data points), or as a solid ll. Click to select a button it
is highlighted with a heavy border. A continuous line is the default
for EChem.
43
Figure 47
The Overlay Display Settings
dialog.
Colour pop-up
menu
Line type
buttons
Navigating
Page Corner controls
Active
page
Scrolling buttons
44
Blank
page
Figure 48
The Go To Page dialog box.
You can also click a numbered Page button to go to that page. If there
are too many pages to show all the buttons along the bottom of the
window, then left and right arrow buttons will appear at either side:
click them to move a page left or right, or press them to scroll left or
right through many pages.
Overlaying Pages
You can overlay pages of data recorded at different times or under
different conditions one atop the other.
Choose the Show Overlay from the Display menu. The nominated
pages selected can be seen through the active page as if each
voltammogram were on a pad of transparent plastic sheets. The menu
command then changes to Hide Overlay and only the active page is
visible. These commands turn the page overlaying display on or off,
respectively, and do not affect which particular pages have been
selected for overlay.
To overlay all pages, choose Overlay All from the Display menu, or
type Command-A (Macintosh), or Control-A (Windows). The data in
all pages appears, drawn atop each other. By default, the data shown
on the active page is black and other, overlaid, pages are in gray
(these settings can be changed). To remove all pages from the overlay,
choose Overlay None from the Display menu, or type Command-H
(Macintosh), or Control-H (Windows PC). Only the active page
remains visible, and none of the others is selected for overlaying.
45
Figure 49
Overlaying pages.
Blank
page
Selected
page
Not included
in overlay
Included
in overlay
46
scaled and the overlaid pages, which could have different time bases,
may not be shown to scale.
Figure 411
The Zoom Window
You can make a further selection in the data display area of the Zoom
window: this automatically zooms in further on that data. If the
selection contains less than four data points, the Zoom window will
appear gray. If this happens, you should reselect an area in the main
EChem window.
Data Display
The Zoom window does not have the Display pop-up menu to switch
between I vs E, or IE vs t etc., but has the other controls (Marker and
page buttons etc.) of the Main window.
47
Figure 412
The Zoom Window in IE vs t
display mode
48
and the Page Comment button will bring up the Page Comment
window for the active page.
As you move the pointer across the data display area, the Cursor
tracks the displayed data, and the current (i) and potential (E)
readings at the tracking point are indicated in the Cursor panel.
49
are looking at, especially if the settings on your machine might have
been altered. A trace may end up looking very strange if it has been
stretched vertically or had an inappropriate baseline subtracted.
Making Measurements
When you have nished recording you can make direct or relative
measurements from the voltammogram (or amperomogram).
When the pointer is over the data display area, the Cursor tracks the
voltammogram, Figure 413. In this case, The Cursor panel shows the
current, potential, and time coordinates at the cursor location
The Cursor only gives discrete measurements, jumping from data
point to data point (you can see this more clearly in the Zoom
window). It cannot provide a reading on the line that is drawn
between the individual data points.
Current, potential and time (I, E and t)
cursor coordinates
Figure 413
Use of the Pointer and Cursor.
50
Pointer
Cursor
Figure 414
Using the Marker tool
Marker
Marker
lair
51
the Marker lair (or from the Marker itself) a duplicate Marker, which
can be placed to set the second point dening the baseline
(Command-Option-drag, or Control-Alt-drag, to place this duplicate
Marker off the curve). The baseline is displayed as a dotted line
passing through the two Markers, Figure 415. The baseline can only
be positioned when you are in I vs t, or IE vs t, display modes. You
cannot set a baseline when in the I vs E, or E vs I, display modes.
Vertical distance of cursor to baseline
Pointer
Cursor
Figure 415
Using the Marker tools to
create a baseline
Duplicate Marker
Marker
Baseline dened
by the two markers
Marker
lair
The value along the baseline is set at zero: the Cursor panel shows the
absolute time and potential, but the current signal at the cursor is
shown relative to the baseline.
Note that the baseline is set for a particular channel on a particular
page of data. When moving between pages, the baseline may move
considerably if locked to the voltammogram; if independent, it will
remain static. Removing one Marker removes both Markers, and the
baseline. Attempting to set a vertical or near-vertical slope will also
remove the baseline and send the Marker and its duplicate home.
the Marker is active, and the time and signal readings at the Marker
position, Figure 416. If the Marker is inactive, the two lower panels
are blank and the top panel displays Off.
Figure 416
The Marker miniwindow
marker not on
graph
marker on I vs E
graph
marker on i
channel in IE vs t
graph
marker on E
channel in IE vs t
graph
Clicking the Set button brings up the Set Marker Position dialog
box, Figure 417,which allows you to alter or dene the Marker or
baseline position by typing values into the text entry boxes, then
clicking the OK button to apply them to the EChem window.
Figure 417
Positioning the Marker
Clicking the Off radio button turns the Marker off, clicking one of the
other radio buttons selects the channel in which the Marker will
appear. If the Lock Marker to Waveform checkbox is on, the Marker
will position itself on the signal, and the text entry box for I or E
values is inactivated (appears dimmed). If the checkbox is off, the
Marker is independent of the voltammogram, and you can enter the I
or E and hence assign the vertical position of the marker. Entering
values into the Marker 2 text entry boxes as well as those of Marker 1
will create a straight baseline joining the two markers.
In the I vs E (or E vs I) display mode, the Marker miniwindow shows
On in the top panel, and I and E values in the other two panels.
Since there is only the one Marker and you cannot set a baseline, the
53
Figure 418
Positioning the Marker when
in the I vs E (or E vs I) display
modes
Background Subtraction
It is possible to set up a background page, the voltammogram from
which is subtracted from all other pages in a le with the same
settings (potential range, scan rate, and so on). This has a number of
uses, for instance, non-linear baseline subtraction. A reference
voltammogram can be made of a blank sample, then standard
additions could be made and the blank trace subtracted to give the
readings for the analytes of interest. Background subtraction can also
be used a to isolate a small signal from a noisy background, or from a
sloping baseline.
To set up background subtraction, go to the page you want to use as a
background page, and choose the Subtract Background command
from the Display menu. The voltammogram on the active page is
subtracted from itself (so it shows a line at zero current), and all other
pages in the same le that have been recorded under the same
conditions (potential range, scan rate, etc. if these settings were
different, distortion and clipping would result.). Note that scans
recorded at different sensitivities (but otherwise identical settings)
can be subtracted. The Page button for the background page shows
the page number underlined.
54
background subtraction. It also means you will not necessarily see the
background page button, but the menu commands Subtract
Background and Clear Background in the Display menu will be
undimmed when a background page is in memory, so this will tell
you if such a page has been set.
The Subtract Background command toggles with the Dont Subtract
Background command. Both leave the background page in memory,
but will subtract it or not subtract it, respectively, from
voltammograms in the open le, so that you can compare
voltammograms before and after subtraction.
Choosing Clear Background from the Display menu clears the
background page from memory, and restores the raw data.
55
Figure 419
The Data Pad window
Row button
Cell button
Data in the current
selection
Drag heading
dividers to
alter column
width
Points entered
in the Data Pad
can be used to deal with the data in the pad, indicated by the buttons
at the top left of the window. By default the Row button is selected
and the Pointer appears as a heavy cross when over the data area.
Click to select a row, Shift-click or Shift-drag to select contiguous
rows, or Command-click (or Control-click) to select or deselect rows
individually; the data can then be cleared, or cut or copied to the
Clipboard as tab-separated text, using the commands in the Edit
menu. If the Cell button (with the A) is clicked, the pointer changes to
an I-beam when over the data area, and text in each cell can be edited
in the normal way. Clicking the Cell button deselects all selected rows.
The Data Pad pop-up menu allows you to add blank rows to the Data
Pad, or to add the current column headings to it as three lines
which is useful to keep track of changed settings, or when
transferring data to other software. You can also choose whether or
not to save the Data Pad settings when a new le is opened: a tick
appears beside this menu command when it is active. It applies only
to the current le. The Auto Add command adds the dened data to
the Data Pad for every sweep, whether single, multiple,
superimposed, or average, and whether or not each sweep is on a
new page.
56
The width of columns can be changed to suit the displayed data and
headings. You might want to narrow columns to display more on
screen, for example, or have a wide column to the right in which to
add comments. Position the pointer on the heavy dividing line
between column headings, so that it changes into the resizing pointer,
drag until the column is the desired width a gray line appears, to
indicate position then release the mouse button.
57
58
Figure 421
Data Pad Miniwindows
Computed Functions
By default, EChem records the raw current data in the I Channel and
does not apply any computed function. Sometimes, though, some
59
Figure 422
The Computed Functions
dialog
Sampling Speed
Computed functions do not affect sampling speeds, or scan rates, but
they may affect the delay between consecutive sweeps. The speed
with which computations are applied to the data is directly related to
the speed of the computer, so slower models will give longer delays.
If this proves to be a problem, perform computed functions after the
data has been collected.
60
Channel Functions
The dialog box has one panel for I Channel and one for the E
Channel, in which functions for the two channels can be set
independently. If multiple functions are applied, their order is from
the top to the bottom of the panel: the waveform is rst smoothed,
then shifted, and so on. The display panel at the bottom of the dialog
box indicates this order (and the display settings, as well).
Figure 423
Smoothing of data
No smoothing
Smoothing value of 1
Smooth
Data can be smoothed to remove noise in the current signal. If the
control is set to zero, then smoothing is off (the default); the larger the
number entered, the greater the smoothing, Figure 423. Click the
up/down arrow buttons to alter the degree of smoothing; hold the
mouse down continuously to increase or decrease the number
61
rapidly; or type a value in the text box to directly set the degree of
smoothing, from 1 to 50. For n point smoothing, at each data point
p the values of the data points in the range pn are averaged (i.e. a
moving point average is taken). At the very start and end of the
voltammogram (or amperomogram) there may be insufcient points
to complete a full n point smoothing and the amount of smoothing
will not be as great. Smoothing will affect different waveforms in
different ways: voltammograms with sharp peaks cannot be
smoothed too much without distortion, but those with broad peaks
can be smoothed a lot more.
Math
The Math control lets you add, subtract, multiply or divide the data
by a constant amount. By default, the setting is None (no operation is
applied) and the text entry box and units control are dimmed. Choose
an operation from the Math pop-up menu, Figure 422
Add or Subtract. If you choose one of these, the text entry box and
units control become usable. You can add or subtract a constant
amount from the signal. Type the value in the text box: it can be up to
30,000, and be set to four decimal places. The units are set by using
the up/down arrow buttons. You may want to add or subtract a
constant value to the E Channel if you have recorded a
voltammogram with a Ag/AgCl electrode but want to change the
display so that zero volts corresponds to use of a calomel or standard
hydrogen electrode.
Multiply or Divide. If you choose one of these, the text entry box
becomes usable. (The units control does not, since you are
multiplying by a scalar number.) Type the value in the text box: it can
be up to 30,000, and be set to four decimal places, although you
cannot enter zero.
Invert. If you choose Invert, the text entry box and units control
remain dimmed. Invert changes the sign of the signal, effectively
multiplying it by minus one: positive values become negative, and
vice-versa. This is usefulness the E channel if you recorded data with
one polarity convention (say, more negative potentials mean greater
reduction) but then later want to display data with the opposite
polarity convention (more negative potentials mean greater
reduction).
62
Function
The Function pop-up menu gives a range of available functions that
can be applied to a signal. By default, the setting is None; if you want
a function applied, choose it from the pop-up menu.
Reciprocal. This function displays the reciprocal of the current signal,
that is, 1i for any data point of value i (so zero values will become
innite).
Figure 424
Integration of data
Original voltammogram
Integrated voltammogram
63
Apply the Integrate function rst, then use the Subtract Background
command to subtract a blank run to achieve a better result. If you
Subtract Background rst, then integrate this will NOT work!
.Differentiate. This function gives the rst-order derivative of the
current signal with respect to time (di/dt), Figure 425. It is useful
when the voltammogram shows ill dened peaks or shoulders where
the differential may give a resolved signal. The Differentiate function
is particularly sensitive to noise, so its use with the Smooth function,
is often necessary.
Figure 425
Differentiation of data
Original voltammogram
Differentiated voltammogram
The Notebook
You can enter your observations and notes in the Notebook, Figure
426, which is saved along with the EChem le. To use the Notebook,
choose Notebook from the Windows menu.
The Notebook has a total of eight numbered pages that can be used
for general notes about a le. Each page can contain up to 32,000
characters, and you can scroll vertically through the contents using
the up and down arrow keys on your keyboard.
Clicking the dog-ears at the lower left of the window turns the pages
back and forth. Click the Date or Time buttons at the bottom of the
window to add the date or time to your notes at the insertion point.
The commands Cut, Copy, Paste, and Clear can be used to edit text
normally, although you cannot paste graphics into the Notebook. You
can also paste text from the Notebook into word processor documents.
64
Figure 426
The Notebook window
Click here to
move to
next page
Click here to
move back a
page
65
Figure 427
The Page Comment window
A comment can be typed in (or pasted into) the window, and text
there can be edited normally. For practical purposes, the text should
not be too lengthy (say over 300 characters), since more than that will
make the comments difcult to read in the window, although you can
autoscroll up and down through them using the arrow keys.
The box at the bottom of the window shows the time and date the
page was recorded or otherwise modied.
66
C H A P T E R
F I V E
67
Selecting Data
Figure 51
A selection rectangle in the
Main window
To select a region of data position the pointer, then click and drag to
highlight a rectangular area. When in the i vs E display mode, the
minimum horizontal extent of any selection in the Main window is
four data points.
When in the iE vs t mode only the vertical extent of the selection
rectangle can be varied, with the horizontal extent being the whole
page. If the channels are split (not overlaid) then you can select a
region on the rst channel then, holding the Shift key, select a region
on the second channel. If the two channels are overlaid, simply drag
to create a common selection rectangle over both channels.
Figure 52
Examples of selection
rectangles in the two different
display modes: above is the
i vs E mode, and at bottom
the iE vs t mode
Editing Data
The Cut, Copy, Paste, and Clear commands appear in the Edit menu.
These commands can be used to copy selection of the text entries in
the Page Comment or Notebook windows and to paste the text into
word processor or spreadsheet documents.
68
When the Main window is active, the commands work with whole
pages of EChem data rather than selections. Cut removes the active
page from the le and places it on the Clipboard. Copy places a copy
of the active page on the Clipboard. Paste adds a page already on the
Clipboard to the le before the currently selected page. Clear removes
the active page from the le. If the Zoom window is active, the active
page is still affected rather than the selection that the Zoom window
is showing, for most purposes.
All these commands are able to be undone (only a single level of
undo is supported). The Undo command, appears in the Edit menu,
and changes to reect your last action. If you have just, for instance,
removed a page from the le by choosing Clear from the Edit menu,
then the menu command will change to Undo Clear Data. (Should
you choose the command again, it becomes Redo Clear Data.)
The editing commands allow you to move pages about and to delete
those you do not want. You can move a page between les by placing
it on the Clipboard and opening another le (closing the current one,
since Scope can only have one le open at a time), then pasting it
where it is wanted. Paste inserts the page on the clipboard
immediately before the active page.
Transferring Data
You can transfer graphs from EChem to other applications, such as a
spreadsheet or drawing program. The Cut and Copy commands
place the Main and Zoom windows on the Clipboard as a picture.
(The same pictures you would see if the windows were printed, with
title, page comments, and so on, but without overlaid pages.) The
Clipboard contents can then be pasted into drawing software such as
Canvas or CorrelDraw which have extra features to modify the
picture for presentation purposes. However the best results are
usually obtained by transferring the data itself to a specialist
graphing program.
An EChem data le can be saved as an ASCII text le able to be
opened by any application that can import text, such as a word
processor, spreadsheet, or graphing program such as Igor Pro,
Kaleidagraph or Origin (to do this, choose the Save As menu
command from the File menu.)
69
Special Copying
EChem also has a more powerful method of copying text or graphics
to the Clipboard for data transfer, the Copy Special command, in
the Edit menu. It allows the copying of overlays in pictures (which
the Copy command itself does not), and the copying of multiple
pages or even an entire le, as text. Choosing the Copy Special
command when the Main window is active brings up the Copy to
Clipboard dialog box (Figure 53).
Figure 53
The Copy to Clipboard dialog
box.
The dialog box lets you choose one of two options: copying the Main
window as a picture; or copying it as text. If the Append to Clipboard
checkbox is turned on, data in text form from the Main window can
be appended to the contents of the Clipboard, rather than replacing
its contents. The control is dimmed and unavailable if you are
copying a picture.
As a Picture. If this radio button is on, then the EChem window,
including visible overlaid pages, is placed on the Clipboard as a
QuickDraw picture. (The same picture you would see if the window
were printed, with title, page comments, and so on.)
As Text. If this radio button is on, then the data from the EChem le
is placed on the Clipboard as tab-delimited text. The Copy page
numbers checkbox allows you to precede the data with the page
number if required. If page overlaying is turned on, then the data for
entire le will be copied to the clipboard, regardless of which overlaid
pages are visible (if any); if it is off, only the active page will be
copied. Use this option for pasting data into spreadsheet or graphing
applications.
70
A similar dialog box appears when you choose Copy Special with
the Zoom window active. When the Zoom window is active, the
picture copied is conned to the selection that the Zoom window
displays.
The Clipboard
Whenever data is cut or copied from EChem, it is stored in the
Clipboard. You can choose Show Clipboard from the Edit menu to see
what is copied: the Clipboard window appears (Figure 54). The
Clipboard window is a normal window with a close box, zoom box,
size box, and title bar, and can be moved around the screen or left in
the background while the EChem window is active.
Figure 54
The Clipboard window as it
might appear after copying:
Copy from the EChem window
produces a picture (near
right); Copy Special, as text,
with potential values in volts
and current in amperes (far
right). Other text format
options allow time and page
number to be copied as well.
71
Current and
potential values
at waveform
cursor position
Figure 55
Operation of the waveform
cursor in the main window
The pointer appears as a cross over the data display area. The
Waveform Cursor only gives discrete measurements, jumping from
data point to data point (you can see this more clearly in the Zoom
window). It cannot provide a reading on the line that is drawn
between the points.
72
Marker
Figure 56
The operation of the marker
and waveform cursor in the
main window.
Markers lair
73
Figure 57
Setting a baseline in the main
window in iE vs t display mode
Current relative to
pointer position
Pointer
Cursor
Potential at Cursor
position
Marker
Duplicate Marker
Baseline
Saving Options
To save a le of recorded data, choose Save from the File menu, or
type Command-S. When this is done, an already existing le will
have any changes made to it saved to disk. The rst time that you
save a le, or on any occasion that you choose Save As from the File
menu, the Save As dialog box will appear (Figure 58).
Figure 58
The Save As Text dialog box
74
The dialog box allows you to navigate through the le system of the
Macintosh to choose where your le will be saved. (You should be
familiar with this process; if not, see your Macintosh Users Guide for
directions.) Once you have typed in a name for the le, you can select
a le format by clicking one of the radio buttons in the lower portion
of the dialog box, and then save the le by clicking the Save button.
You can save multiple copies of a le in any format or formats,
provided that the copies have different names or are in different
folders.
Data File
In this format, which is the default, both data and settings (including
macros) are saved. The le chronicles the entire recording, and is the
usual way you would want to save data. EChem can open only one
le at a time. Opening a data le will close an already opened le.
Settings File
This format does not save any recorded data, only the settings.
Settings include the technique, current range, and those that affect the
way the data looks, such as the window size, display settings, and
menu conguration. Macros are also stored as settings. Using settings
les, you can build up a library of settings for many different
experiments, to enable quick and easy preparation for recording.
Settings les have a different icon from other EChem les. Doubleclicking on a settings le icon from the Finder will automatically load
the settings from that le into a new untitled EChem le. Opening a
settings le using the Open directory dialog box with the Load
Settings checkbox selected loads the settings into the current le.
Text File
This format saves data as a standard text le able to be opened by any
application that can import text, such as a word processor, spreadsheet, or statistics package. Each data point is stored as a row of
numbers comprising the page number, time (t, in seconds), potential
(E, in volts) and current (I, in amperes) values, in that order, separated
by tabs.
75
Figure 59
The Save as Text dialog box
Before the a text le is saved, you will be presented with the Save as
Text dialog box (Figure 59). The save page numbers checkbox allows
you to omit or include the page number and time data from the le.
Additionally you can save the calculated current (i.e. the currents as
they are displayed) or the raw current data. There may be up to four
current sampling periods, i1, i2, i3, and i4 for each displayed data
point. Differential methods (for example differential pulse
voltammetry) require two of these sampling periods but normally
only display the difference (for example i1 -i2). Usually you want to
save the data as it is displayed but by selecting Raw currents you
can save the actual data collected separately for the i1 and i2 periods.
See Chapter 7 for more details about sampling periods.
Thus at most one row of the text le could have seven items: page
number, time, potential, i1, i2, i3, and i4. For simple regraphing of a
voltammogram using a spreadsheet, however, you only require three
items: page number, potential and calculated current. If you only
want to regraph a few voltammograms from a le then it will
probably be easier to use the Copy Special command in the Edit
menu and to paste the data directly into the spreadsheet or graphing
program.
The size of a text le is typically much greater than the size of the
EChem data le it is created from, and saving the data of a le as text
can be relatively slow. While a le is being saved as text, the
percentage of the le currently saved is displayed. To stop the
creation of a text le, type Commandperiod (or Controlperiod).
The EChem Data File format actually contains much more
information (names of the techniques used, date and time of
experiment, user annotations, range settings etc.) and all in a much
more compact format than a text le, so you should always keep the
original data as an EChem Data File and only ever use a text le to
transfer data to another application. You can always regenerate a text
le from an original EChem Data File if required.
76
Macro File
This format saves any macros currently in memory as a separate le,
which can be opened by EChem as required. It is useful to save
particular groups of macros together.
Macro les have a different icon from other EChem les. Doubleclicking on a macro le icon from the Finder will automatically load
the macros from that le into a new untitled EChem le. Opening a
macro le using the Open directory dialog box (whether or not the
Load Settings checkbox is on) loads the macro into the current le.
Appending Files
This feature allows any EChem data le to be appended to the end of
an already open le in order to produce a single le with the desired
contents. By combining this feature with EChems ability to cut and
paste pages of data in a le or between les, summary les can be
created using only those segments of recordings that have
signicance. Appending a le is an option provided in the Open
directory dialog box: choose Open from the File menu. (If you have
made changes to your le since last you saved, you will be asked if
you want to save them.) The Open directory dialog box appears
(Figure 510) and by default only EChem les are shown in the
scrolling list. You can navigate through your hard disk using the
Macintosh hierarchical le system to nd the le you want.
Click the Append to Current File checkbox to turn it on. Note that the
Load Settings checkbox becomes dimmed and unusable, since the
appended le takes on the settings currently in memory. This may
result in some scale changes, but the raw data will not be altered.
Select the EChem le you wish to append to the currently open le,
and click the Open button to perform the operation. The pages will be
added on to the end of the current le.
Text Files
EChem can open text les, or append them to already open les. To
do this, choose Open from the File menu. The Open directory
dialog box appears (Figure 510) click the Text Files radio button
77
Figure 510
The Open dialog box with the
Append option selected
so that only text les will appear in the scrolling list. The Load
Settings checkbox becomes dimmed and unusable, since text les
cannot contain settings data. The text le must can have several
different formats and the items in each row must be separated by
tabs, commas, or semicolons. Typical formats are:
You can navigate through your hard disk using the Macintosh or
Windows le system to nd the le you want. After a text le has
been selected in the Open directory dialog box and the OK button has
been clicked, the Read Text Options dialog box appears (Figure 511).
Read Time Values. If this checkbox is on, EChem reads in the rst
column of numbers as time values. EChem expects a constant
difference between time values: a discontinuity is treated as the start
of a new page of data. The minimum selection in EChem is four data
78
Figure 511
The Read Text Options
dialog box
points: thus any times read in must have at least three consecutive
intervals the same to create a new EChem page of data. If times are
not read in, then the EChem Time axis will have no units.
The Time Units radio buttons allow you to specify the time units of
the time values.
EChem rst scans the le to see if it is in order. If there is a problem,
such as erratic time values or text where it expected numbers, it alerts
you and does not load the le. It also allows you to
Pasting in Text
Copied text from data les (such as Scope software) of other software
can be pasted into EChem directly. The text copied to the clipboard
must be in a correct format.
Printing
Printing an EChem le or parts of it will give you a hard copy of your
data for use in reports and presentations. There are two menu
commands in the File menu concerned with printing: Page Setup
and the basic Print command (with a keyboard equivalent of
Command-P, or Control-P), which may change depending on what
can be printed at the time.
79
Page Setup
The Page Setup dialog box that appears when you select the Page
Setup command will depend on your chosen printer (and system
software). A typical Page Setup dialog is shown in Figure 512. The
users guide that came with your printer will explain most of what is
involved. Choose the paper size that you will be using, page
orientation, and so on.
Figure 512
A Page Setup dialog box for
an Apple LaserWriter 12/640
on Macintosh (upper) and on
a Windows PC (lower). Other
printers will exhibit different
options.
80
High-Resolution Printing
Note
For the best possible
printing, ensure that you
are using the latest
version printer driver for
your particular printer.
Many manufacturers
allow you to download the
latest printer drivers from
their web sites.
Faster Printing
If Faster Printing is not selected, EChem passes the recorded data to
the printer driver, which generates a set of instructions which are
passed to the printer. If there are many data points in the le, the
printer driver software has to work harder at converting the data
points into the printer instructions, which will take more time.
When Faster Printing is selected, EChem attempts to speed up
printing by creating a bitmapped image of the data to be printed.
81
Since the le itself, the chosen resolution, the printer, and the type of
computer all have a bearing on the speed of the process, this will not
always result in faster printing. Try a few pages with your setup to
establish relative speeds using this method and printing normally.
When faster printing and high-resolution printing are both selected,
EChem determines the resolution of the printer and generates a
bitmap at that resolution (if the printer resolution cannot be
determined EChem just generates a low resolution bitmap). This
rasterised image is then transferred to the printer directly rather than
having to be converted to PostScript, or other printer instructions.
The time saving can be quite signicant on les with large numbers
of data points, with little or no loss in resolution, but it is possible that
it could take longer with some systems. On Macintosh computers
EChem must be given enough memory to image the data at high
resolution. An alert box will warn you if memory is insufcient.
82
What Prints
Main
Zoom
Data Pad
Print Notebook
Notebook
Notebook contents
When a Print command is chosen, the Print dialog box for your
printer appears. EChem provides special options: the Print Current
Page Only and Print Sweep Description [Link] the Print
Current Page Only checkbox is on, the active page prints regardless of
the specied page range. To print a range of pages, turn off the
checkbox and enter the page numbers as usual. When the Print
Sweep Description checkbox is on, the parameters displayed in the
Technique Description panel (Figure 23) are also printed underneath
each graph.
Figure 513
A Print dialog box for an Apple
LaserWriter 12/640 on
Macintosh (upper) and on a
Windows PC (lower). Other
printers will exhibit different
options.
83
Figure 514
The Page Layout dialog box
Drag the
image to
where
you want
it on the
page
You can also double-click the image to scale it to the maximum size
that will t on the page. If the Keep Shape checkbox is checked, then
the image is scaled in proportion to its original dimensions (which
depend on the window settings), otherwise it can be reshaped at will.
If, however, you are printing multiple EChem pages on a page (using
the Waveform Print Layout controls in the Page Setup dialog box),
you will see a number of rectangles in the page area rather than the
image of one page, and the Keep Shape checkbox will not appear.
The le title, page number, and any page comments are included in
the printed EChem page. Long comments mean the area used for the
drawing is reduced; very long comments will be truncated.
The Notebook is printed out looking much like it does on screen, but
empty columns are not included in the hard copy.
On a Macintosh printed text will appear in the Geneva font, unless
you have a PostScript LaserWriter and check Font Substitution in its
Page Setup dialog box, in which case Helvetica will be used. If you
are using the TrueType Geneva font in your Mac OS, the text will be
printed at the maximum resolution of the printer on any printer.
Faster printing always produces a bitmap with no substitution of
fonts taking place.
84
85
86
C H A P T E R
S I X
Customizing &
Automating EChem
You can to customise and to automate functions within EChem,
greatly increasing its convenience and ease of use. It can be simplied
or modied by:
87
Preferences
The options in the display settings and recording controls allow basic
customizing of EChem. You can also choose to lock, hide, or alter
controls, menus, and menu commands (and their keyboard
equivalents). This can be particularly useful in simplifying EChem for
teaching purposes.
The Preferences submenu in the Edit menu contains four menu
commands: Options; Menus; Controls; and Start-Up. These allow you
to alter various aspects of EChem performance and display.
Menus
The six EChem menus (File, Edit, Technique, Display, Windows,
Macro: see Appendix A1) and their commands can be modied from
the default settings by using the Menus dialog box (Figure 61),
which appears on selecting the Menus submenu command. You
can hide or lock any menu or menu command to create a very simple
EChem setup, limiting the actions that can be performed. This is
particularly useful when you want inexperienced students or
technicians to be able to use some features of EChem, but not to edit,
delete, or change the data in les.
Figure 61
The Menus dialog box
88
The dialog box will initially display the File menu. To move to the
dialog boxes of adjacent menus, click the arrows by the dialog box
title, or press the right or left arrow keys on the keyboard. Click the
OK button to apply any changes you have made.
Menus that are too long to t entirely within the dialog box will have
a downwards pointing arrow at their base: click it (or press the down
arrow key on the keyboard) to move through the menu; click the
arrow that appears at the top of the menu (or press the up arrow key)
if you need to move up again. By default, the menu title and all items
within the menu will have a tick to their left, and all menu commands
will have an open padlock beside them, indicating that everything is
visible and unlocked.
Clicking the tick beside the menu title will hide the menu (a cross
appears): it will not appear in the menu bar when you return to the
EChem window. Clicking the tick beside a menu command or a
dividing line will hide it: it will not appear in the menu, and neither
will any Command-key equivalent work. Clicking a cross will change
it to a tick, and show the previously hidden item beside it.
Clicking an open padlock changes it to a closed padlock, and locks
the menu command beside it. The command will still appear in the
menu, but it will be dimmed and cannot be activated (if there is a
Command-key then this will also be inactivated). Clicking a closed
padlock changes it to an open padlock, and unlocks the previously
locked menu command beside it.
Command-Key Equivalents
Some menu commands have Command-key equivalents. The
equivalent key appears selected in the text entry box, and you can
either change it, or delete it so that no Command-key equivalent is
available.
Command-key equivalents for menu commands can also be added or
changed. Click a menu command to select it: the Cmd Key area of the
dialog box becomes active. Type a single lower-case letter (a, b, c, ...)
or number (1, 2, 3, ...) in the text entry box (letters are automatically
capitalized; invalid characters will be rejected) and click the Set
button to assign a keyboard equivalent. If you choose a character in
89
use elsewhere, an alert box will warn you. If you choose the character
anyway, your choice overrides the previous assignment.
Controls
On selecting the Controls submenu command, the Control Options
dialog box appears, Figure 61. It lets you modify the display of the
various EChem Control Panels, Figure 23. By default, all items will
have a tick to their left, and the icons show the tall window to the left
in front of the panel to the right, indicating that everything is visible
and that panels will appear behind the Main window in case of
overlap. You can hide any EChem panel to create a very simple
EChem setup, if you want to limit the actions that can be performed.
Figure 62
The Control Options dialog
The icons show two overlapping rectangles. By default, the tall left
rectangle is in front (the panel to appear behind the main EChem
window in case of overlap). Click the icon, to make the short right
rectangle appear in front, if you want the panel to appear on top of
the EChem window. Click it again to revert to the default setting.
You can also change the overlap order can be by Option-clicking the
tile of a panel in the main EChem window.
90
The vertical space (the blank space above the sample panel), and
EChem title can also be hidden.
Options
The EChem Options dialog box, Figure 63, is opened by the
Preferences/Options command in the Edit menu.
Figure 63
The Echem Options dialog
The Auto Save Data checkbox will cause the EChem le to be saved
immediately after every sweep. It is on by default. You may wish to
turn it off if you want to do a succession of sweeps with the minimum
delay period between each sweep, or if you have set up a series of
macro commands and want to also set up the Save command from
within a macro.
Figure 64
The Display pup-up menu
can be shown (upper) or
hidden (lower).
91
Start-Up
When EChem rst starts up, it will use its factory default settings,
taking the whole screen for its display, with the current range on the
lowest sensitivity, and so on. You can alter these defaults so that
EChem will always start with your preferred settings.
Settings are of two sorts: those that affect recording, such as the
technique and channel ranges; and those that affect the way the data
looks, such as the window size, channel areas, display settings, and
menu conguration. To save or clear customized settings, select the
Start-Up submenu command: the Start-Up Settings dialog box
appears (Figure 65).
Figure 65
The Start-Up settings dialog
Clicking the OK button will save all current settings in the EChem
Settings le in the Preference folder in the System folder so that they
are used each time you start up EChem. Clicking the Clear button
will clear any settings currently stored in the EChem Startup le.
Emergency Access!
Note
If you have created startup settings but want start
up EChem with its factory
default settings, on a onetime basis, hold down the
Command key as you open
it (straight after doubleclicking the icon). Release
the key when the alert box
appears, and click the OK
button.
92
Figure 66
The Emergency Access
dialog box
93
Macros
Macros are used to group sets of commands together conveniently,
enabling you to speed up repetitive and tedious tasks, such as
changing the settings for various parts of an experiment, and to
automate recording and analysis. They record the results of your
actions step by step, then reproduce them when played back. If you
nd yourself regularly doing the same series of operations in EChem
macros can automate things considerably.
Macros can record any EChem operation: setting dialog box and
window controls; changing the display format; saving data as a new
le; printing the Zoom window; and so on. There are some
differences involved in recorded and real operations, but in general,
dialog boxes will guide you through your options.
It is important to understand how macros work: they record the
results of your actions, not individual keystrokes and mouse clicks,
and record the simplest possible interpretation of those actions. Even
if you spend some time ddling with control settings during the
recording of a macro, only the nal settings you obtain will be used.
Macros are not able to be edited.
You should keep a written record, in a notebook, HyperCard stack, or
whatever you nd most convenient, of the steps involved in your
macros, and their purpose: it is easy to forget which macro does what
when you havent used them for a few weeks. Noting the steps down
before actually recording will help when constructing complex
macros, since it can prove easy to miss out a step or end a repeated
sequence in the wrong place, with detrimental effects.
Macro Hint
Macros cannot be edited
but they can activate other
macros. It is usually better
to write several small
macros and to use a master
macro to call each of them
in turn. If you make a
mistake then you will only
have to rewrite the macro
the error is in.
94
Recording a Macro
To record a macro, choose Start Recording from the Macro menu, or
type Command-R (the menu command then changes to Stop
Recording). During the process, a small indicator changes in the
display panel, and the message Recording is displayed to remind
you that your actions are being recorded, not effected. Perform each
action to be recorded, then choose Stop Recording from the Macro
menu, or type Command-R again. Once you stop recording, the Add
Macro to Menu dialog box appears (Figure 67). When a macro is
being recorded, for the most part EChem remembers rather than
executes operations, but operations such as changing current ranges,
for example, are done as you record.
Type here to create a new menu
Figure 67
The Add Macro to Menu
dialog box
The pop-up Menu button allows you to select the menu in which
your macro will appear from a list of existing menus. By default, the
macro will be added as a new menu command to the Macro menu.
You can create a new menu by entering its title in the Menu text entry
box: the menu will be added to the right of existing menus in the
menu bar. The name of the macro (up to 20 characters) should be
entered in the Item text entry box.
An optional Command-key equivalent can be assigned to the macro
as well: type a single lower-case letter or number in the text entry box
(letters are automatically capitalized and invalid characters will be
rejected). If you choose a character already in use, an alert box will
warn you of the fact and tell you where it is assigned. If you choose
this character anyway, your choice overrides the previous assignment
95
and the Command-key equivalent will only work for (and appear
beside) the menu command that you have just created.
The Size indicator tells you the number of steps recorded (useful if
you cant remember which step you are up to in the middle of a
complex macro), and the memory taken by the macro, so far. The
amount of memory used depends on the complexity of the
procedure. Click the Discard button to discard the macro you have
just recorded. Click the Cancel button to continue recording more
steps in the macro. Click the Add button to add the macro to the
bottom of the selected menu; the Add button is only active and
undimmed when the macro is named and a menu is chosen.
Until you save the le, the macro exists only in memory and is not
permanently stored. If you open another le and save that, the macro
(and all other currently available macros) will become part of the new
le. When you quit EChem, you will not be asked to save changes if
you have created new or altered existing macros. So it is a good idea
to save the le each time you create a macro (or save it as various
macro les).
Playing a Macro
Once assigned a name and location, macros act much as if they were
menu commands. Select them from their menu or type their
Command-key equivalent to use them. While a macro plays, the title
of the menu in which it resides is highlighted, and no other functions
can be performed within EChem, nor can one switch to another
application and leave EChem in the background. To stop a macro
playing, hold down the Command key and press Period (.). The
macro will stop at its current step.
Deleting a Macro
To delete existing macros, choose the Delete Macro menu command
in the Macro menu which brings up the Delete Macro dialog box
(Figure 68).
A scrolling list displays the name of the menu that the macro is in, a
colon, and the name of the macro, for all available macros. To delete a
macro, select it and click the Delete button. To delete multiple macros,
96
Figure 68
The Delete Macro dialog box
Shift-click or Shift-drag to select contiguous macros, or Commandclick (or Control-click) to select or deselect multiple macros
individually. The dialog box will close and the macro or macros will
be gone. As a shortcut, double-click a macro to delete it and close the
dialog box in one step.
As was mentioned, when a le is saved, all currently available macros
are saved with it. When you delete a macro, you delete it from
memory. If the macro is part of the current le, it is permanently
deleted from that le only when the le is saved. Copies of the same
macro that are part of other les will not be deleted.
97
Starting Sampling
Macros can be used to control when sampling starts and stops: you
simply click the Start button when recording the macro, and EChem
will start sampling at the appropriate point when the macro is played.
98
Opening Files
A macro can be used to open the same le each time it is played, or to
allow the user to choose which le to open. To open a particular le
with a macro, choose Open from the File menu while the macro is
being recorded: the Macro Open directory dialog box is displayed
(Figure 69).
To allow the user to choose which le is to be opened when the macro
is played, press the Option key when selecting the Open command
while recording the macro. The Open directory dialog box will be
displayed when the macro is played.
Figure 69
The Macro Open dialog box
When opening the same le each time, the full hierarchical le name
(the pathname) of the le, from the disk through any number of
folders, is noted. If the le has been moved (or deleted) since the
macro was recorded, then EChem searches in the most recently used
folder and in the same folder as EChem. If the le is in neither of
these locations, an alert box lets you know that EChem cannot nd
the le, and the Open directory dialog box is displayed to allow you
to nd it yourself. If you choose a different le at this stage, it will be
opened instead and if you click the Cancel button, the macro will
abort.
99
Saving Files
When playing a macro, you can save data in a le or in a series of
les. Choosing the plain Save command will save a named le (you
might want to do this at specied intervals to minimize data loss in
case of possible power loss; just remember that data is not recorded
during the time it takes to save a le to disk).
You can specify where and in what form you want the data to be
saved by using the Save As command when recording the macro.
The Macro Save As directory dialog box will appear (Figure 610).
Figure 610
The Macro Save As dialog
box
100
Macro Commands
Control structures for macros are provided in the Macro Commands
submenu in the Macro menu (see Appendix A1). The macro
commands are only available while recording a macro. They allow
you to provide user feedback in the form of dialog boxes or sounds,
set up repeat sequences, and so on.
Update Screen
Normally, when a macro is played, the screen is updated after each
macro step (a tick beside the Update Screen menu command indicates
that it is active). Choosing the command from the menu as the rst
step in a macro causes the macro to play without redrawing the
screen each time the data display is altered in some way (the tick
disappears). Update Screen can be turned off or on at any stage of a
macro (the settings toggle). If Update Screen is off, the screen will be
redrawn only when the macro is nished, or it is turned on again.
This may considerably speed up some macros, for example, those
involving multiple changes to view and display settings: in this case,
the data on screen will still be seen to be selected, but data off screen
will not be scrolled through before selection, as would occur if
Update Screen were off. Since you cannot edit macros, you cannot
change the Update Screen settings once the macro is nalized. You
can, however, record another macro that consists of two steps:
turning update screen off, then calling the original macro.
Wait
Selecting the Wait macro command brings up the Wait dialog box
(Figure 611). A pop-up menu lets you select from Wait For, Wait
Until, and Wait Until the Next, to wait for a set length of time (say, 55
seconds), wait until a certain time (say, 11:20 a.m.), or wait until the
next time division (say, at the next hour) before the macro continues.
101
Figure 611
The Macro Wait dialog box,
with the three options
selected
Figure 612
The Macro Wait dialog box
during the playing of the Wait
step of a macro
Play Sound
Selecting the Play Sound macro command brings up the Macro
Play Sound dialog box (Figure 612), which allows you to select from
the range of sounds in your Macintosh System to set audible alerts in
macros.
102
Figure 613
The Macro Play Sound dialog
box
Note
It helps to notify a user
that something is up if
you precede an alert box
with an audible signal
(using the Play Sound
macro command), since he
or she may not be looking
at the screen when an alert
box appears.
Click the name of a sound in the scrolling list to select it. If you wish
to hear the selected sound, click the Play button. To have it actually
played in the macro, click the OK button. To choose more than one
sound option, Shift-click or Shift-drag to select contiguous sounds in
the list, or Command-click to select or deselect multiple sounds
individually. Sounds appear in the list in the order they were installed
in the system, and are played back in that order. To save time in
creating multiple sounds, you can create a library of sound
combination macros, and simply incorporate one or more of them in
the macro that needs them.
You might wish to have three beeps signal when EChem starts
recording data, or a bell and a whistle at the end of a scan. You can
even record short verbal cues using the Sound control panel (if your
Macintosh has a microphone input) and use these in your macros.
If a macro attempts to play a sound not in the System le (created on
a computer with a different setup, or since removed from the System),
then an ordinary system beep will be substituted for the sound
originally specied.
Message
If you select the Message macro command, the Macro Message
dialog box appears (Figure 612). This allows you to cause alert boxes
requiring user response to appear at certain stages within the macro.
103
Figure 614
The Macro Message dialog
box
You can type in the message of your choice (up to 255 characters). The
dialog box produced will have an OK button, and if the checkbox at
the top is highlighted, a Cancel button as well (for exiting the macro).
There are four choices of icon: the default shape (a hand) is
highlighted with a heavy border. Click one of the icon buttons to
choose it. You can use the icons to indicate the urgency of an
important message (hand, exclamation mark, and face, in order of
decreasing urgency), and the EChem icon for general messages which
indicate EChems state. Click the OK button when you have chosen
an icon and typed in the message.
Note
The Speak Message
command is only available
on Macintosh systems.
Speak Message
If you select the Speak Message macro command, the Speak
Message dialog box appears (Figure 615). Using it, you can give
spoken messages in macros, if your Macintosh has speech abilities.
Type in the phonetic equivalents to allow non-English words to be
spoken. After the message is spoken, the macro carries out
subsequent steps.
You can type in the message of your choice (up to 255 characters). If
the Macintosh on which the macro plays has no speech abilities then,
if the checkbox is off, a standard system beep will be used in place of
the spoken message. If the checkbox is on, an alert box appears, just
as if the Macro message dialog box were used: this will stop the
macro until its OK button is clicked.
104
The volume at which the message is spoken can either be the default
system volume set in the Sound control panel, or can be set
independently to any of the sound levels, from 1 to 7, available in the
Sound control panel, by clicking or pressing the arrow controls.
Figure 615
The Speak Message dialog
box
Begin Repeat
The Begin Repeat macro command brings up the Begin Repeat dialog
box (Figure 616). This is used to repeat groups of steps in a macro.
You may repeat any group of commands up to 100,000 times. This
could be used, for example, to set up sampling at staggered intervals
overnight. For each Begin Repeat you should specify an End Repeat.
If you do not specify enough End Repeats, they are automatically
added when you select Stop Recording, but if you have a complex
macro, the repeated sequences might not end up in the right places.
Writing down the macro before recording it will help avoid such
problems.
Figure 616
The Begin Repeat dialog box
105
End Repeat
Each Begin Repeat or Repeat for Each Page macro you specify should
be paired with an End Repeat. If you do not specify enough End
Repeats, they are automatically added when you select Stop
Recording, but if you have a complex macro, the repeated
sequences might not end up in the right places. Writing down the
macro before recording it will help avoid such problems.
Note
The AppleScript command
is only available on
Macintosh systems.
AppleScript
This macro command allows you to insert an AppleScript as a macro
step. AppleScript is a scripting language for automating tasks, and
controlling applications and their interactions through Apple events.
To use it, you must have AppleScript installed on your Macintosh. On
selecting the AppleScript macro command, the AppleScript from
Macro dialog box appears. You will also need to be familiar with
using AppleScript.
For more information read the AppleScript section of your Scope
Users Guide. The EChem software has similar capability.
106
C H A P T E R
S E V E N
EChem Techniques
This chapter describes each of the items in the EChem Techniques
menu and the experiments that can be performed. Unnecessary
Techniques can be deleted from the menu by use of the Menu Editor
(discussed in Chapter 6).
107
Introduction
EChem software supports a variety of voltammetric and
amperometric techniques:
Standard techniques
Linear sweep voltammetry
- potentiodynamic polarization
- polarization resistance
Differential pulse voltammetry
Square wave voltammetry
Normal (and reverse) pulse voltammetry
Stripping techniques
Linear sweep stripping voltammetry
Differential pulse stripping voltammetry
Square wave stripping voltammetry
Normal pulse stripping voltammetry
Special techniques
Cyclic voltammetry
- cyclic potentiodynamic polarization scanning
MultiPulse voltammetry
- non-standard sampling for linear sweep voltammetry
- non-standard sampling for cyclic voltammetry
- cyclic square wave voltammetry
- cyclic differential pulse voltammetry
Pulse Amperometry
- differential pulse amperometry
- double pulse amperometry
- constant potential electrolysis
- differential normal pulse voltammetry
- double pulse voltammetry
108
109
General Considerations
Voltammetric experiments involve measuring the current signal while
the potential difference between the working and reference electrode
is varied. Results are usually presented as a plot of current versus
potential.
Amperometric techniques use a xed base potential, i.e. they have a
scan rate of 0 V/s. However pulses may be superimposed on the base
potential. The results are usually plotted as current signal versus time.
Figure 71
Typical potential/time profile
of a voltammetric ramp
Potential
Time
110
Staircase ramp
Potential
Figure 72
The digitally generated
staircase ramp
Es
Rest
time
ts
Time
1 V
0.5 mV
2 V
1.0 mV
5 V
2.5 mV
Sampling speed
Time Base
100 Hz
10 ms
400 Hz
2.5 ms
1 kHz
1 ms
4 kHz
0.25 ms
10 kHz
0.1 ms
111
Table 73 Commonly selected scan rates (mV/s) as a function of Step Height and Step Width.
Height, mV
Width, ms
0.5
0.1
0.2
0.25
0.3
0.4
0.5
0.6
0.7
0.75
0.8
0.9
1.0
1.1
1.2
1.25
1.5
1.6
1.8
2.0
2.5
3.0
3.3
4.0
5.0
7.5
8.0
10.0
11.1
12.5
14.3
15.0
16.7
20.0
25.0
30.0
33.3
40.0
50.0
62.5
66.7
80.0
83.3
90.9
100.0
111.1
125.0
142.9
166.7
200.0
112
5000
2500
2000
1666.6667
1250
1000
833.3333
714.2857
666.6667
625
555.5556
500
454.5455
416.6667
400
333.3333
312.5
277.7778
250
200
166.6667
151.5152
125
100
66.6667
62.5
50
45.045
40
34.965
33.3333
29.9401
25
20
16.6667
15.015
12.5
10
8
7.4963
6.25
6.0024
5.5006
5
4.5005
4
3.499
2.9994
2.5
1
10000
5000
4000
3333.3333
2500
2000
1666.6667
1428.5714
1333.3333
1250
1111.1111
1000
909.0909
833.3333
800
666.6667
625
555.5556
500
400
333.3333
303.0303
250
200
133.3333
125
100
90.0901
80
69.9301
66.6667
59.8802
50
40
33.3333
30.03
25
20
16
14.9925
12.5
12.0048
11.0011
10
9.0009
8
6.9979
5.9988
5
1.5
15000
7500
6000
5000
3750
3000
2500
2142.8571
2000
1875
1666.6667
1500
1363.6364
1250
1200
1000
937.5
833.3333
750
600
500
454.5455
375
300
200
187.5
150
135.1351
120
104.8951
100
89.8204
75
60
50
45.045
37.5
30
24
22.4888
18.75
18.0072
16.5017
15
13.5014
12
10.4969
8.9982
7.5
2
20000
10000
8000
6666.6667
5000
4000
3333.3333
2857.1429
2666.6667
2500
2222.2222
2000
1818.1818
1666.6667
1600
1333.3333
1250
1111.1111
1000
800
666.6667
606.0606
500
400
266.6667
250
200
180.1802
160
139.8601
133.3333
119.7605
100
80
66.6667
60.0601
50
40
32
29.985
25
24.0096
22.0022
20
18.0018
16
13.9958
11.9976
10
2.5
25000
12500
10000
8333.3333
6250
5000
4166.6667
3571.4286
3333.3333
3125
2777.7778
2500
2272.7273
2083.3333
2000
1666.6667
1562.5
1388.8889
1250
1000
833.3333
757.5758
625
500
333.3333
312.5
250
225.2252
200
174.8252
166.6667
149.7006
125
100
83.3333
75.0751
62.5
50
40
37.4813
31.25
30.012
27.5028
25
22.5023
20
17.4948
14.997
12.5
Table 73 Commonly selected scan rates (mV/s) as a function of Step Height and Step Width.
Height, mV
Width, ms
0.5
250.0
333.3
500.0
1000.0
1250.0
1500.0
2000.0
3333.3
5000.0
6666.7
10000.0
100000.0
2
1.5002
1
0.5
0.4
0.3333
0.25
0.15
0.1
0.075
0.05
0.005
4
3.0003
2
1
0.8
0.6667
0.5
0.3
0.2
0.15
0.1
0.01
1.5
6
4.5005
3
1.5
1.2
1
0.75
0.45
0.3
0.225
0.15
0.015
2
8
6.0006
4
2
1.6
1.3333
1
0.6
0.4
0.3
0.2
0.02
2.5
10
7.5008
5
2.5
2
1.6667
1.25
0.75
0.5
0.375
0.25
0.025
Scan Rate
The scan rate is determined by the ratio of the step height to the step
width:
E
ScanRate = -----sts
This means that only certain scan rates, albeit a very large number,
can be entered. Table 73 contains a small selection of scan rates for
various combinations of step height and width.
In most techniques the easiest way to enter a legal scan rate is to type
in the desired scan rate, then to alter the Step Width to the nearest
exact multiple of the time base, Table 72. The scan rate will be
automatically updated to a legal value.
113
Pulse Techniques
Pulse techniques require sudden increases in potential to be
superimposed on the staircase for short periods of time. Each pulse is
characterized by a Pulse Width and Pulse Height (Figure 73).
pulse width
Figure 73
Pulse terminology
pulse height
Potential
step width
step height
iod
Time
By selecting a sample
period of 20 ms or 16.7 ms
(for 50 or 60 Hz mains)
you can dramatically
remove main noise from
your voltammograms.
When using slower scan rates the sampling period can be set to
minimize mains noise. If you are operating on a mains frequency of
50 Hz (Europe, Australia, Chile, Argentina, and most of Africa, Asia)
then use sampling periods that are a multiple of 1/50 Hz = 20 ms, i.e.
a single mains AC cycle. If you are operating at 60 Hz (North
America, South Korea, Taiwan, most of South America, and parts of
Japan, Peru and Saudi Arabia, etc.) then make your sample period a
multiple of 1/60 Hz 16.7 ms. This will cause the current data to be
sampled over an integral number of mains AC cycles and thus any
noise arising from this source will be effectively ltered out.
With most techniques the sampling period is located at the end of the
pulse or step. But with the more exible MultiPulse Voltammetry and
Amperometry techniques you may set the sample period to be at the
beginning, middle or end of a step or pulse.
115
Staircase ramp
Potential
step width
step height
Rest
time
sampling per
iod
Time
116
Parameters
When Linear Sweep Voltammetry is chosen from the techniques
menu the Linear Sweep Voltammetry dialog box appears
(Figure 75). This allows the user to adjust the parameters for the
technique. The rst time the technique is chosen the parameters will
be default values.
Figure 75
The Linear Sweep
Voltammetry dialog box
Speed
The data acquisition rate is normally set at 10 kHz in the Speed popup menu. Very slow rates (less than 1 mV/s) may require slower
speeds so that appropriately long step widths can be used.
Range
The range pop-up menu selects the full scale range of the applied
potential. Three ranges are available, 1000 mV giving 0.5 mV
resolution, 2000 mV giving 1 mV resolution, or 5000 mV giving 2.5
mV resolution, Table 71. Usually the 2000 mV range is chosen.
117
(Step) Height
This is the amplitude of each potential step. The minimum step
available depends on the selected range, Table 71. Values from 0.5 to
2.5 mV are ideal for work where accurate peak positions, heights and
areas are required. Values over 5 mV may give insufcient potential
resolution, and also lead to excessively high charging currents at
macro electrodes, for most voltammetric and pulse techniques.
Initial (Potential)
This is a text box that sets the initial or starting potential of the ramp.
This can be chosen anywhere between the limits of the range setting.
Final (Potential)
The potential voltage at which the ramp waveform [Link] can
be chosen anywhere between the limits of the range setting. The nal
potential may be either more negative than the initial potential
(negative scan) or more positive than the initial potential (positive
scan).
Steps
The number of steps in the ramp is derived from the initial and nal
potentials and the step height:
FinalPotential InitialPotential
Steps = -----------------------------------------------------------------------------------------StepHeight
(Scan) Rate
This sets the rate at which the ramp will be generated. Faster scan
rates lead to a higher background signal unless a microelectrode is
used. This is usually set between 5 and 1000 mV/s for ordinary macro
electrodes. The scan rate is the ratio of the step height to the step
118
width. When the rate is adjusted the step width is also adjusted to
maintain the selected step height.
(Step) Width
The time that the potential is kept constant at each step. The value
must be a multiple of the time base, Table 72. Step width, step height
and scan rate are interrelated:
StepHeight
StepWidth = ----------------------------ScanRate
After you adjust the scan rate, adjust the step width to the nearest
exact multiple of the time base, Table 72. This may alter the scan rate
slightly.
Rest Time
This is the length of time the initial potential is maintained before the
scan is started. A time of around 1 to 60 seconds is usually
appropriate, although much longer times may be necessary for
corrosion experiments (potentiodynamic polarization or polarization
resistance experiments).
Figure 76
Waveform Overview dialog
box for a typical LSV
technique
119
the steps and the sampling period (the thick, red, line segments). If
the parameters are above the maximum limits or do not make sense
then you will see an error dialog describing what is wrong
120
step width
amplitude
Potential
Figure 77
Waveform terminology for
Square Wave Voltammetry
sampling
period, i1
Rest
time
step height
sampling
period, i2
Time
121
([i1-i2], [E1+E2]/2)
The actual values of the two currents, i1 and i2 are stored in the
arrays of these names and can be viewed separately by choosing
Sampling Display in the Display menu, to present the dialog in
Figure 78.
Figure 78
The Data Selection dialog
box.
The default settings for SWV displays i1i2 (i3 and i4 are not used for
Square Wave Voltammetry). Selecting i2 Minus Nothing would
change the graph on display so that you would see the current values
at the top of each pulse.
You may occasionally nd that a SWV run gives you small peaks and
that on attempting to run the experiment at a slightly higher gain you
nd that much of the signal is off scale. Remember that the default
display is i1i2, i.e. the difference between the current values in i1 and
i2. It is possible that the arrays i1 and i2 contain many large current
values and so need to be recorded on low gain settings to be on scale.
You can check that this is so by using the Sampling Display
command. If corresponding values in i1 and i2 are both large and
nearly equal then the difference, i1i2 will be small but you will not
be able to select higher gains to collect the data.
Parameters
When Square Wave Voltammetry is chosen from the techniques menu
the Square Wave Voltammetry dialog box appears (Figure 79).
Suitable parameters can be entered in the relevant spaces to alter the
technique as needed for the experiment being conducted.
Changes take effect when the OK button is clicked. Click the Cancel
button to exit without saving.
122
Figure 79 z
The Square Wave
Voltammetry dialog box.
Range
The range pop-up menu selects the full scale range of the applied
potential. Three ranges are available, 1000 mV giving 0.5 mV
resolution, 2000 mV giving 1 mV resolution, or 5000 mV giving 2.5
mV resolution, Table 71. Usually the 2000 mV range is chosen.
Initial (Potential)
Enter the initial or starting potential of the ramp in this text box. This
can be chosen between anywhere between the extremes of the
selected range. The Initial Potential is the mid point of the rst square
cycle.
Final (Potential)
The potential voltage at which the ramp waveform nishes. This can
be chosen anywhere between the extremes of the selected range. The
nal potential may be either more negative than the initial potential
(negative scan) or more positive than the initial potential (positive
scan). The Final Potential is the mid point of the last square wave
cycle.
Frequency
This is the frequency of the square wave. Frequencies in the range
5 60 Hz usually give good results, but with microelectrodes, or RAM
Chapter 7 EChem Techniques
123
For square wave voltammetry the step width must be twice some
multiple of the time base, so that not all frequencies are allowed.
(Step) Height
Typical values of 1 2.5 mV are ideal. Values over 10 mV usually give
insufcient potential resolution for precise analytical work. The step
height and frequency are related to the scan rate by:
ScanRate = Frequency StepHeight
Steps
This value is automatically calculated and shows the number of steps
in the ramp according to the formula:
FinalPotential InitialPotential
Steps = -----------------------------------------------------------------------------------------StepHeight
S.(ampling ) Period
Current data will be collected and averaged over this period which
occurs at the end of each step (upper and lower). The sampling
period should normally be shorter than the step width
(= 1/Frequency) in order for the charging current to decay. For
124
Rest Time
This is the length of time the initial potential is maintained before the
scan is started. A time of around 1 to 60 seconds is usually
appropriate.
125
step width
current sampling period
Figure 711
Waveform terminology for
Normal Pulse Voltammetry
step height
initial (zero)
pulse
initial (base)
potential
pulse width
Parameters
A Typical dialog box for setting up a normal pulse experiment is
shown in Figure 712. Each parameter is altered by entering a new
value in the appropriate box, selecting a new menu item, or clicking
the control arrows. Changes take effect when the OK button is
clicked. Click the Cancel button to exit without saving.
Speed
The data acquisition rate is normally set at 10 kHz. Very slow rates
(less than 1 mV/s) may require slower speeds so that appropriately
long step widths can be used.
126
Figure 712
The Normal Pulse
Voltammetry dialog box
Range
The range pop-up menu selects the full scale range of the applied
potential. Three ranges are available, 1000 mV giving 0.5 mV
resolution, 2000 mV giving 1 mV resolution, or 5000 mV giving 2.5
mV resolution, Table 71. Usually the 2000 mV range is chosen.
Initial (Potential)
This is the initial or starting potential of the ramp. This can be chosen
between 2000 mV if on the 2000 mV range or 5000 mV when on
the 5000 mV range. This value is usually chosen to be a value at
which the electrode reaction of interest does not occur (so that the
current is close to zero). For Reverse Pulse Voltammetry this potential
is chosen to cause complete oxidation (or reduction) of the substrate,
and the pulses then cause the reverse reaction.
Final (Potential)
The potential voltage at which the ramp waveform nishes. This can
be set between 2000 mV if on the 2000mV range or 5000 mV when
on the 5000 mV range. The nal potential may be either more
negative than the initial potential (negative scan) or more positive
than the initial potential (positive scan). This is the height of the last
pulse to be applied. It can be thought of as the height of an imaginary
ramp passing through the tops of the pulses.
(Scan) Rate
This sets the rate at which the ramp will be generated in mV per
second. This is usually set between 5 and 100 mV s-1 for macro
127
(Step) Width
The time that the potential is kept constant at each step. The value
cannot be set less than 0.2 ms. Times of around 2 4 ms are usually
satisfactory. Step Width is related to Step Height and Scan Rate by:
StepHeight
StepWidth = ----------------------------ScanRate
(Step) Height
This denes the increase in height (mV) of successive pulses. The
minimum step available is 1 mV. Typical values of 1 2 mV are ideal.
Steps
This value is automatically calculated and shows the number of steps
in the ramp according to the formula:
FinalPotential InitialPotential
Steps = -----------------------------------------------------------------------------------------StepHeight
Pulse Width
The length of time of the applied pulse. Values between 5 and 100 ms
are commonly used, with a minimum of 0.1 ms possible. The pulse
width should be wide enough to allow the non-faradaic components
of the current to decay before sampling. For a 1 mm2 macro electrode
allow the pulse to be at last several milliseconds longer than the
sample period.
Rest Time
This is the time that the initial potential will be applied to the cell
before the actual ramp is applied. This allows you to leave the cell
electrodes at a preset potential in order for charging currents and
other disturbances to settle. This time is usually in the range of
1 60 seconds. Setting the rest time to zero will start the technique
immediately.
128
S.(ampling ) Period
Current data will be collected and averaged over this period which
occurs at the end of each pulse. A suitable sampling width is 20 ms,
or 16.7 ms where mains frequency is 60 Hz. This effectively
discriminates against mains frequency interference.
Figure 713
The Waveform Overview
dialog box for the Normal
Pulse Voltammetry technique
129
amplitude
Figure 714
Waveform terminology for the
Differential Pulse
Voltammetry technique
Rest
time
step height
sampling
period
Time
Remember that you are viewing the difference between two current
signals. The actual values of the two currents, i1 and i2 are stored in
the arrays of these names and can be viewed by choosing Sampling
Display in the Display menu.
Figure 715
The Sampling Display dialog
box
This brings up the Data Selection Dialog (Figure 715) which is set to
display i2 Minus i1 (i3 and i4 are not used for DPV). Selecting i2
Minus Nothing would change the graph on display so that you
would see the current values at the top of each pulse.
You may occasionally nd that a Differential Pulse Voltammetry run
gives you small peaks and that on attempting to run the experiment
at a slightly higher gain you nd that much of the signal is off scale.
Remember that the default display is i2 i1, i.e. the difference
130
between the current values in i2 and i1. It is possible that the arrays i1
and i2 contain many large current values and so need to be recorded
on low gain settings to be on scale. You can check that this is so by
using the Sampling Display command to view i1 and i2 separately. If
the values in i1 and i2 are both large and nearly equal then the
difference, i1 i2, will be small but you may not be able to select
higher gains to collect the data because i1 and/or i2 will go off scale.
Increasing the pulse height for DPV experiments may give you larger
peaks but resolution will be decreased.
Note that if you make the Pulse Width exactly half the Step Width
then you will actually have a waveform that is identical to that used
for Square Wave voltammtery. However, there are two important
differences. Firstly the default display of DPV is i2 i1 while for
SWV it is i2 i1. Thus you will need to alter the DPV Sampling
Display appropriately. Secondly DPV results are plotted against the
potential at base of each pulse, whereas in SWV the average potential
over each square wave step is used.
Parameters
When Differential Pulse is chosen from the Techniques menu the
Differential Pulse Voltammetry dialog box appears (Figure 716).
Figure 716
The Differential Pulse
Voltammetry dialog box
131
Range
The range pop-up menu selects the full scale range of the applied
potential. Three ranges are available, 1000 mV giving 0.5 mV
resolution, 2000 mV giving 1 mV resolution, or 5000 mV giving 2.5
mV resolution, Table 71. Usually the 2000 mV range is chosen.
Initial (Potential)
This is the initial or starting potential of the ramp. This can be chosen
between 2000 mV if on the 2000 mV range or 5000 mV when on
the 5000 mV range.
Final (Potential)
The potential voltage at which the ramp waveform nishes. This can
be set between 2000 mV if on the 2000 mV range or 5000 mV
when on the 5000 mV range. The nal potential may be either more
negative than the initial potential (negative scan) or more positive
than the initial potential (positive scan). The nal potential cannot be
the same as the initial potential.
(Step) Height
This is the amplitude of each voltage step in millivolts. The minimum
step available is 1 mV. Typical values of 110 mV are ideal. Keep this
parameter as small as possible.
(Scan) Rate
This sets the rate at which the ramp will be generated in mV per
second. This is usually set between 1 and 25 mV s-1. Increasing the
scan rate decreases peak resolution. However very slow scan rates
mean inordinately long analysis times.
132
(step) Width
The time of each step (including the pulse time). This is also the
period between pulses. This parameter is usually allowed to vary
while the Scan Rate and Step height are set. This parameter is usually
set between 0.5 to 4 s. Step Width is related to Step Height and Scan
Rate by the following relationship.
StepHeight
StepWidth = ----------------------------ScanRate
Steps
This is simply a readout value showing the number of steps in the
ramp according to the initial and nal voltages and the step height set
in these text boxes. The relationship between the number of steps and
the other parameters is:
FinalPotential InitialPotential
Steps = -----------------------------------------------------------------------------------------StepHeight
Pulse Width
The width of the pulse superimposed upon the potential ramp. This
parameter is usually set in the range of 5 to 100 ms. The pulse should
last long enough to allow the non-faradaic components of the current
to decay before sampling. For a standard glassy carbon electrode with
an area of ~1 cm2 where sampling is to be carried out over a wide
enough window to reject mains noise (20 ms @ 50 Hz) then a pulse
width of 50 ms would be appropriate.
Pulse Amplitude
The height of the pulse superimposed upon the potential ramp. This
is usually set in the range of 50 100 mV. Larger values increase
sensitivity (i.e. you get bigger peaks), smaller values improve
resolution.
The Pulse Height must be greater than Step Height, or else the next
step will be higher that the previous pulse!
133
Rest (time)
This is the period between when the deposition potential is applied
and the scan commences. This is usually set to between 1 and 5 s.
S.(ampling ) Period
Current data will be collected and averaged over this period which
occurs just prior to the pulse and at the end of each pulse. Usually
this parameter is set to between 1 and 20 ms. Multiples of 20 ms (at
50 Hz mains) or 16.7 ms (at 60 Hz mains) will discriminate against
mains noise. In general there will be less noise for longer sampling
periods.
134
Stripping Techniques
EChem allows you to perform stripping type techniques using any
one of the ve standard methods just described. EChem supports;
135
10-7
10-8
20
10-10
60
After the metals have been deposited within the mercury electrode
stirring is stopped and a rest potential is applied for at least 30 s.
Linear sweep voltammetry or one of the standard pulsed techniques
can be applied. At the end of the ramp an oxidizing cleaning potential
is applied to remove any residual metals from the mercury electrode.
This potential should be at least 0.2 V more oxidizing than the peak
potential of the most electronegative metal being measured.
It is not necessary to deposit all the metal ions in solution. It is simply
necessary to repeat the experiment under exactly the same conditions
(deposition time and potential, scan rates and limits etc.) for a series
of standards followed by the unknown(s) so that a useful graph of
concentration versus signal can be prepared. If the concentration of
the metal ion is relatively high then it is important to either dilute the
solution before measuring and/or to ensure that deposition times are
short. This is to ensure that the build up of metal analyte in the
mercury does not change the properties of the amalgam too far from
that of a dilute mixture. A concentrated amalgam may give peaks at
unexpected values or even multiple peaks for a single analyte, or may
give a current that overloads the potentiostat.
Closely overlapping peaks arising from metal ions with a similar
reduction potential can sometimes be separated by the addition of a
complexing agent (such as EDTA, or dimethylglyoxime). The metal is
136
Setting Parameters
When any of the stripping techniques are chosen from the Technique
menu, a dialog box will appear (Figure 718). The dialog is similar to
the non-stripping technique dialog except that extra controls for
Deposition and Cleaning appear at the bottom of the dialog box. You
can set a potential, and a time period, for both deposition and
cleaning. All the Stripping techniques carry out deposition rst,
followed by the actual technique and then cleaning takes place.
Both the deposition and Clean Time periods can be turned off using
the check boxes next to their titles. By tuning off both the Deposition
and Clean Time periods then only the basic technique will be left. For
example, when using Cyclic Voltammetry you should leave both
check boxes off unless you are attempting an unconventional
experiment.
The ramp and pulse parameters are set up in the same way as for the
corresponding non-stripping technique. Refer to the corresponding
non-stripping technique for information on these parameters.
137
Figure 718
An example of the Stripping
version of the standard Linear
Sweep Voltammetry technique
dialog box
Deposition potential
This potential is applied for a xed period (usually several minutes)
and can be set between extremes of the Range setting.
Deposition Time
This is the time in seconds for which the deposition potential will be
applied. You can enter times from 0.01 seconds up to 9999 seconds
(about 2 h 47 min).
Cleaning Time
This is the time in seconds for which the cleaning potential will be
applied. You can enter times from 0.01 seconds up to 9999 seconds
(about 2 h 47 min).
138
CAUTION. Connection
of the PowerLab to an
external stirrer and
purge system should
only be attempted by a
qualied electronics
technician.
the PowerLab digital output, page 160. The Stirrer check box controls
digital output 1 and the Gas check box controls digital output 2 of the
PowerLab. Refer to your PowerLab Owners Guide for details of the
digital output signals and how to connect to them. Note that on
PowerLab/200 /400 and the older /2e and /4e units the digital
output signals are provided on the Multiport connector on the rear of
the unit. Other PowerLab models have a dedicated digital output
connector. The digital I/O ports provide 0 5 V at about 1 mA. This is
enough to act as an on/off signal but is not sufcient to power a
stirrer or other equipment.
Checking the Gas and/or Stirrer checkboxes allows you to control the
state of an external stirrer motor or solenoid gas valve during
deposition. These check boxes control two of the digital output (TTL)
lines provided by the PowerLab. Activating these controls (click the
check box) will set the corresponding digital output on at appropriate
times during the experiment. Output 1 is on during the Deposition
and Cleaning periods, while Output 2 is on during the Deposition
time only. A cable can be made to use these signals to turn a stirrer
and solenoid gas valve on and off during the stripping experiment.
You can monitor the state of the digital output lines by displaying the
Digital Output panel, Figure 732.
139
Cyclic Voltammetry
The potential is driven between two limits at a constant rate, similar
to linear sweep voltammetry. When a limit is reached the potential is
swept back again at the same rate. The experiment can start at any
potential (initial potential) between the two limits and usually
nishes at the initial potential so that an integral number of cycles are
performed. This technique is usually used for qualitative purposes
and is valuable in the characterization of new compounds.
The ideal waveform used in cyclic wave voltammetry is depicted in
Figure 719. For computer driven systems like EChem/PowerLab the
ramp is stepped (shown below right) and this method is often called
staircase cyclic voltammetry.
Figure 719
Waveform terminology for
Cyclic Voltammetry
upper limit
initial
potential
final
potential
step width
step height
sampling per
iod
lower limit
140
Parameters
Choose Cyclic Voltammetry from the Techniques menu. The Staircase
Cyclic Voltammetry dialog will appear (Figure 720).
Figure 720
The Staircase Cyclic
Voltammetry dialog box.
Range
The range pop-up menu selects the full scale range of the applied
potential. Three ranges are available, 1000 mV giving 0.5 mV
resolution, 2000 mV giving 1 mV resolution, or 5000 mV giving 2.5
mV resolution, Table 71. Usually the 2000 mV range is chosen.
141
Initial (Potential)
This is the initial or starting potential of the ramp. This can be set
anywhere between the Upper and Lower Potential Limits. It is
normally chosen to be a value at which oxidation or reduction of the
substrate does not occur.
Final (Potential)
The potential voltage at which the ramp waveform nishes. It is
automatically set to be the same as the initial potential (so as to
complete a full cycle).
(Step) Height
Click the arrows to adjust the Step Height, usually 1 or 2 mV is ideal.
More than 10 mV will not give adequate resolution on the potential
axis.
(Scan) Rate
This sets the rate at which the ramp will be generated in units of
mV/s. It is usually set in the range 10 1000 mV/s for normal macro
electrodes (1 mm diameter or greater). Microelectrodes (diameters
from less than 1 m to 100 m) are usually employed for faster scan
rates.
142
(Step) Width
This is the time that the potential is kept constant at each step. In
general rst adjust the Step Height, next enter the Scan Rate, then
nally adjust the Step Width to the nearest allowed resolution
increment, Table 72
Step Width is related to Step Height and Scan Rate by the following
relationship.
StepHeight
StepWidth = ----------------------------ScanRate
Steps
The number of Steps in a cycle is determined automatically and is
given by the formula:
Steps =
UpperPotential LowerPotential
2
StepHeight
If Steps is not an integer then EChem will not perform the experiment
and a warning dialog will appear when you click the View or OK
button. In this case you will need to adjust Step Height or the Upper
and Lower Potentials to make Steps an integer.
Rest Time
This is the period after the deposition potential has been applied and
before the scan commences. This is usually set to between 1 and 60s.
(Deposition) Pot(ential)
Not normally used for Cyclic Voltammetry. This is the deposition
potential applied for a xed period prior to the scan. This can be set
anywhere between the extremes of the Range.
(Deposition) Time
Not normally used for Cyclic Voltammetry. This is the time in seconds
for which the deposition potential will be applied. You can enter
143
(Cleaning ) Pot(ential)
Not normally used for Cyclic Voltammetry. The potential applied
during the Cleaning Time. The Cleaning Potential can also be set so as
to oxidize (or reduce) any material that has plated out on the working
electrode. This can be set anywhere between the extremes of the
Range.
(Cleaning ) Time
Not normally used for Cyclic Voltammetry. At the end of a scan a
cleaning potential can be applied for a period dened by the Cleaning
Time (usually a few seconds to a minute or so).
Cycles
Enter the number of cycles required in this text box, this number must
be an integer less than 100. You can also choose the initial direction of
the cycle (if the Initial Potential lies between the Upper and Low
Potential Limits) by using the Initial Direction check box.
The maximum number of data points that can be stored during one
experiment is set at 65000. Thus number of cycles that can be
performed in the one experiment is limited by the formula:
Steps Number of Cycles 65000
Usually this will enable you to collect a maximum of between 8 and
100 scans (depending on your parameters). Of course if you require
more cycles you can always start the experiment over again or set a
Macro to repeat the experiment as many times as you like. There will
however be a short interval between each experiment.
144
Figure 721
The Waveform Overview
dialog box for Cyclic
Voltammetry.
145
MultiPulse Voltammetry
The MultiPulse Voltammetry technique allows you to generate your
own waveform. This is constructed by the addition of a staircase
ramp and one or two pulses per step of the ramp. These pulses may
be either positive or negative and may be increased or decreased
throughout the scan. Using this dialog the operator is able to dene
any one of a number of regularly used techniques. There is also the
added exibility of being able to dene an unusual pulse sequence. In
addition up to four current sampling windows can be selected with
their position and duration independently set.
A library of different signals, that can be used at any time, can be
achieved by writing Macros that include the Multi Pulse method or
by storing MultiPulse parameters in Settings les. This will allow you
to automate your experiments.
Note that if you want to set up a non-standard or cyclic Square Wave
voltammetry experiment then you will need to make the Pulse Width
exactly half the Step Width. Remember to adjust the Sampling
Display to i1-i2. Also MultiPulse Voltammetry results the default
display is to plot current against the potential at the base of each
pulse, whereas in the Square Wave Voltammetry technique the
average potential over each step is used.
Parameters
To use the MultiPulse technique, select the Multi Pulse method from
the Techniques menu. The MultiPulse dialog will appear (Figure
722).
Each parameter is altered by entering a new value in the appropriate
box, selecting a new menu item, or clicking the control arrows.
Changes take effect when the OK button is clicked. Click the Cancel
button to exit without saving.
Ramp parameters
First the Ramp parameters are adjusted. These have a similar function
to the parameters used for linear sweep voltammetry.
146
Figure 722
The Multi Pulse Voltammetry
Technique dialog box
Speed
The data acquisition rate is normally set at 10 kHz. Very slow rates
(less than 1 mV/s) may require slower speeds so that appropriately
long step widths can be used.
Range
The range pop-up menu selects the full scale range of the applied
potential. Three ranges are available, 1000 mV giving 0.5 mV
resolution, 2000 mV giving 1 mV resolution, or 5000 mV giving 2.5
mV resolution, Table 71. Usually the 2000 mV range is chosen.
Initial (Potential)
This is the initial or starting potential of the ramp. This can be chosen
between 2000 mV if on the 2000 mV range or 5000 mV when on
the 5000 mV range.
Final (Potential)
The potential voltage at which the ramp waveform nishes. This can
be set between 2000 mV if on the 2000 mV range or 5000 mV
when on the 5000 mV range. It must not be the same as the initial
potential. The nal potential may be either more negative than the
initial potential (negative scan) or more positive than the initial
potential (positive scan).
147
(Scan) Rate
This sets the rate at which the ramp will be generated in mV per
second. It is usually set less than 1 mV s-1 for corrosion work or in the
range of 5 to 1000 mV s-1 for other work. Faster scan rates lead to a
higher background signal.
(Step) Width
The time that the potential is kept constant at each step. Step Width is
related to Step Height and Scan Rate by:
StepHeight
StepWidth = ----------------------------ScanRate
(Step) Height
The size of each step. The value of this parameter will depend on the
experiment being performed. But it is usually less than 10 mV.
Steps
This is simply a readout value showing the number of steps in the
ramp according to the initial and nal voltages and the step height set
in these text boxes. The relationship between the number of steps and
the other parameters is:
FinalPotential InitialPotential
Steps = -----------------------------------------------------------------------------------------StepHeight
Rest Time
This is the period between when the deposition potential is applied
and the scan commences. This is usually set to between 1 and 5 s, or
longer for corrosion work.
148
Cyclic
Clicking the Cyclic checkbox will activate the Params... button. This
also automatically sets the Final Potential equal to the Initial Potential
(so that the cycle will be complete)
Params...
Clicking the Params... button brings up the Cyclic Parameters dialog
box, Figure 723, so that a cyclic waveform can be set up. You can
enter the Upper and Lower Limits of the scan, the Number of Cycles
to be performed, and the Initial Direction of the scan (if the Initial
Potential lies between the extremes of the Upper and Lower Potential.
See the section on Cyclic Voltammetry for more information on the
operation of these parameters.
Figure 723
The Cyclic Parameters dialog
box
Dening pulses
For each step of the staircase ramp two pulses may be used. Each
pulse is activated by clicking the box in the upper left-hand corner of
the pulse panel, and now the relevant parameters can be entered.
(Pulse) Start
The timing of each pulse is linked to the start of each step in the base
ramp. For example if you enter 20 ms in the Start box it means the
pulse will be activated 20 ms after the beginning of the step. The
pulse can begin at any time during each step and must be less than
the Step Width. If you are using a PowerLab/200, /400, /800 or /2e,
/4e or /8e then try to avoid starting pulses at 0 ms or starting two
149
(Pulse) Height
The height of the pulse superimposed upon the potential ramp. Note
that the value for the height of the pulse is added to the potential of
the staircase ramp. If two pulses are made to overlap then the ramp
and pulse potentials are all added together over this period.
Inc(rement)
Pulses on successive steps will be incremented by this amount.
Width
The duration of the pulse must be such that the entire pulse occurs
within one step of the potential ramp.
150
Figure 724
An example of settings for the
Multi Pulse dialog box.
Figure 726
The Sampling Time dialog
box for Multi Pulse
voltammetric techniques.
151
Each sampling period is activated by clicking the check box in the top
corner of each panel. The Start text box denes the commencement of
each sampling period with respect to the beginning of each step of the
ramp. The relative position of each sample period on the step can be
seen at the bottom of the dialog box (Figure 726).
Figure 727
The sampling period
indicator bar
Figure 728
The Sampling Display dialog
box
152
153
MultiPulse Amperometry
The MultiPulse Amperometry technique allows you to perform
constant potential and pulsed amperometric, and some voltammetric
experiments. The applied waveform is constructed by the addition of
up to two pulses on a base potential. These pulses may be either
positive or negative and may be increased or decreased throughout
the scan for voltammetric work. You are able to dene any one of a
number of regularly used methods. There is also the added exibility
of being able to dene an unusual pulse sequence. In addition up to
four current sampling windows can be selected with their position
and duration independently set.
A library of different signals, that can be used at any time, can be
achieved by writing Macros that record your methods or by storing
parameters in Settings les. This will allow you to automate your
experiments.
Parameters
To use this technique, select the Multi Pulse Amperometry from the
Techniques menu. The dialog shown in Figure 729 will appear.
Figure 729
The Multi Pulse Amperometry
dialog box.
154
Base potential
First the base potential is set. This must be within the extreme values
of the Range setting.
Speed
The data acquisition rate is normally set at 10 kHz. Very long
sampling periods may require slower speeds. Up to 4095 samples can
be averaged in one sampling period.
Range
The range pop-up menu selects the full scale range of the applied
potential. Three ranges are available, 1000 mV giving 0.5 mV
resolution, 2000 mV giving 1 mV resolution, and 5000 mV giving
2.5 mV resolution.
Steps
The total number of steps taken during the experiment is entered here
and must be less than or equal to 16000.
Step Width
The time taken for a single step of the experiment (base potential +
pulse 1 + pulse 2) during the experiment:
Duration
The Duration is the total time taken for the experiment and is
automatically calculated:
Duration = Steps StepWidth
Rest Time
This is the period after the deposition potential is applied and the
scan commences. This is usually set to between 1 and 60 s, or longer
for corrosion experiments.
155
Dening pulses
For each step up to two pulses may be applied. Each pulse is
activated by clicking the box in the upper left-hand corner of the
pulse panel, and now the relevant parameters can be entered.
(Pulse) Start
The timing of each pulse is linked to the start of each step. For
example if you enter 100 ms in the Start box it means the pulse will be
activated 100 ms after the beginning of the step. The pulse can begin
at any time during each step but the start time must be less than the
Step Width
(Pulse) Height
The height of the pulse. Make sure that the sum of the base and pulse
potentials does not exceed the Range setting.
Note that the value for the height of the pulse is added to the base
potential. If two pulses are made to overlap then the base and two
pulse potentials are all added together over this period.
Inc(rement)
Pulses on successive steps will be incremented by this amount. If you
enter a non zero value you will probably be doing a pulsed
voltammetric experiment ie the potential will be changing in a ramplike manner during the experiment.
Width
The duration of the pulse must be such that the entire pulse occurs
within one step of the experiment.
156
.
Figure 730
Example settings for Multi
Pulse Amperometry
experiment.
Figure 731
Waveform overview for the
settings in Figure 730.
157
158
159
CAUTION. Connection
of the PowerLab to an
external dropping
mercury electrode should
only be attempted by a
qualied electronics
technician.
Polarographic Techniques
If you are using a PowerLab S or ST model or PowerLab/800, or
MacLab/8e, then the use of dropping mercury electrode (DME) is
facilitated by the provision of a synchronized TTL pulse signal (of
about 5 V amplitude and 10 ms duration) at the beginning of each
step. This pulse is carried by Output 4 of the TTL digital output lines
accessed at the back of the PowerLab unit. Consult your PowerLab
Owners Guide for pin connection information.
This signal is provided for all EChem techniques all the time.
However, as the duration of the TTL pulse is 10 ms, your technique
must employ a step width of greater than 10 ms so that the signal can
return to its resting state between steps. Thus the drop rate must be
signicantly less than 100 per second. Note that the TTL signal is
provided for timing purposes only, and that there is not enough
current available (about a milliampere) to actually drive a solenoid
drop hammer directly. In such cases you will need to construct a
suitable amplier/power source for your DME.
In addition Output 3 of the digital output (PowerLab S and ST
models and PowerLab/800 or MacLab/8e only) is set on at the
beginning of each scan and turned off at then end of the experiment.
If you want to do a series of sweeps with a hanging mercury drop
electrode (HMDE), with a new drop for each experiment, then this
signal can be used. Outputs 1 and 2 are described on page 138.
Figure 732
The Digital IO panel. Output
3 is shown on, while outputs
1, 2, and 4, are shown off. On
most PowerLab e models
only Outputs 1 and 2 are
shown.
160
C H A P T E R
E I G H T
Additional Techniques
Apart from the EChem software, additional electrochemical
techniques can be performed with PowerLab using the Chart and
Scope software.
161
Introduction
In addition to the EChem techniques, you can also use the Chart and
Scope applications to perform or monitor the following experiments:
162
AC Voltammetry
EChem is not specically designed for AC voltammetric studies but
there are several ways to use your PowerLab with this technique. If
your existing potentiostat or waveform generator system can perform
AC voltammetry then you can use your PowerLab with Chart or
Scope to record the results. Your PowerLab now replaces a
conventional chart recorder.
Alternatively EChem can drive such a potentiostat using the Linear
Sweep or Cyclic Voltammetry modes. The potentiostat can be used to
provide an AC waveform. Provided the step width of the staircase
ramp generated by EChem is very much longer than the period of the
AC waveform then you will get good results. For example if your AC
excitation is 20 Hz, with a period of 50 ms, then you should ensure
that the step width is at least 200 ms.
You can also use EChem and a PowerLab connected to a potentiostat,
AC waveform generator and AC lock in amplier. Both the EChem
and the AC waveform can be summed into the potentiostat. Again
make sure that the step width of the staircase ramp is much longer
than the period of the AC waveform.
163
Chart and Scope can sample up to 40,000 points per second on two
channels or up to 105 points per second on one channel. You can make
use of these features in a number of ways:
Figure 81
Setting up the Stimulator in
Scope to perform Fast Cyclic
Voltammetry
The base potential has been set to 1.00 V and a potential ramp has
been set up to go from 1.00 to +1.00 V and back again over a period
of 40 ms using the Up & Down waveform option. This corresponds to
a scan rate of 50 V/s.
Figure 82 shows an example of a positive and negative cyclic
waveform. The base potential has been set to +0.20 V and a potential
ramp has been set up to go from +0.20 to +0.80 V back again to -0.40
V and nally return to +0.20 V, over a period of 20 ms using the
Triangle waveform option. This corresponds to a scan rate of 120 V/s.
The Triangle waveform option always starts a scan in the centre of the
potential limits, while the Up & Down waveform option starts a scan
at one or the other potential limits.
When performing FCV a large background charging current is often
recorded. This can be a hundred times larger than the signal you are
looking for. Fortunately the charging current is highly reproducible
between scans and can be subtracted out: a background scan is
obtained, and then the run repeated on a new page where the
compound of interest (often a neurotransmitter) is present. Make sure
165
Figure 82
Cyclic voltammetry using
Scope and the Stimulators
Triangle waveform option
that the two scans are run at the same gain setting. Select the Scope
page that contains the background scan then use the Set Background
command this will subtract this scan from all other pages in the
le. Use the Don't Subtract Background command to cancel
subtraction, and the Clear Background de-identies the background
page. See the Scope Users Guide for more information.
166
Chronoamperometry
These techniques require that a constant potential is maintained for a
dened period while the current is monitored (chronoampero-metry).
If the current signal is integrated with respect to time then the total
charge transferred at the electrode can be calculated (chronocoulometry).
For these techniques Chart and Scope (supplied with the PowerLab
unit) can be used. PowerLab with Chart or Scope will allow you to
perform Single, Double and even Multi-Step Chronoamperometry,
with data collection taking place in milliseconds or over hours or
even days if need be.
167
Output Voltage
control for
PowerLab S series
models)
Figure 83
The Constant Output Dialog
box.
Output Voltage
control for
PowerLab e series
models
168
Figure 84
An example setting for
performing chronoamperometry using Timed
Events in Chart
Figure 85
An example showing how the
Stimulator in Chart can be
used to generate fast pulse
waveforms.
169
Analysis of Chronoamperomograms
The resulting chronoamperomograms obtained from a planar disk
electrode should exhibit a current/time relationship governed by the
Cottrell equation, Appendix D.
nFAD 1 2 C
i = --------------------------------1
1
1000 2 t 2
You can use the Chart Curve Fitting command (Windows menu) to t
your data with a an idealised curve. This command will only be
present if the Curve Fitting analysis extension is correctly installed in
the Chart Extensions folder (adjacent to the Chart software icon on
your hard disk). For instructions on the use of the extension also see
Application note AN003 which can be downloaded from our web site
at [Link]
It is usually easier to rst simplify the Cottrell equation to:
a
i = --------1 2
t
a
i = ----------------------- + b
1
(t + c) 2
This must be entered as a New Equation in the Curve Fitting
extension the very rst time you use it, Figure 86.
170
Figure 86
Entering an equation suitable
for the Cottrell equation
Figure 87
Fitting a Cottrell equation to
chronoamperometric data
171
172
Figure 88
The Scope software
Stimulator dialog set up for a
multistep chronoamperometric
experiment.
Chronocoulometry
Chart and Scope software have the ability to integrate an incoming
signal both in real time or off line. Since the total charge transferred
(the total number of coulombs, or electrons, transferred) is equal to
the integrated current, the settings used for chronoamperometry can
also be used for chronocoulometry. It is only necessary to set up an
unused channel (usually channel 3 if using Chart software) to be the
integral of the current monitor channel (usually channel 1). Note,
however, that the accuracy of this method is not as good as the results
that can be obtained from a precision coulometer. If you require very
precise results you should record the signal directly from such a
device.
173
Figure 89
Integrating the current data
with Scope software.
When using Chart software, any one of the unused channels can be
setup to be the integral of the current channel. This is an on-line
function so you need to record to display the integral. To setup
integration you need to choose the Computed Input command from
the Channel pop-up menu which brings up the Computed Inputs
dialog box (Figure 810). Several integration options are available. For
more information refer to the Computed Inputs sections in the Chart
Users Guide.
Figure 810
Setting up on-line integration
in Chart using the Computed
Inputs dialog box
174
Chronopotentiometry
This technique requires that a constant current be maintained
between the working and auxiliary (counter) electrodes. The potential
at the working electrode is monitored. For many systems the
potential will remain approximately constant until the electroactive
species is consumed in the region of the electrode.
For this type of experiment it will be necessary to use a specialist
galvanostat or to run your potentiostat in galvanostat mode (check
the potentiostat's manual to see if your potentiostat can be used in
this mode) and use Chart to record the data. The ADinstruments
Potentiostat can be used in galvanostat mode using Chart or Scope
software. If you are using a third party potentiostat/galvanostat you
can set the potential from the front panel of the potentiostat and use
Chart or Scope software to record the current and potential with time.
CAUTION
If you are using a high
compliance potentiostat or
galvanostat remember that
dangerous or even possible
lethal potentials may be
generated across the
electrodes. Read your
potentiostat/galvanostat
manual carefully to
establish safe working
procedures, and always
isolate the cell before
disconnecting the
electrodes.
175
Table 81 Galvanostat range settings available for each Output Voltage range of the
PowerLab unit, when using the ADInstruments Potentiostat in galvanostat mode.
Output Voltage Range
10 V
1 A
10 A
1 mA
100 mA
5V
500 nA
5 A
500 A
50 mA
2V
200 nA
2 A
200 A
20 mA
1V
100 nA
1 A
100 A
10 mA
500 mV
50 nA
500 nA
50 A
5 mA
200 mV
20 nA
200 nA
20 A
2 mA
100 mV *
10 nA
100 nA
10 A
1 mA
* This setting not available on some PowerLab models (for example PowerLab/200 and /400).
177
178
179
Amperometric Titrimetry
Titrations can be performed in an electrochemical cell where the
working electrode is held at a constant potential while the current is
180
Liquid Chromatography
Detectors
Electrochemical detection can be an extremely sensitive technique for
liquid and highpressure liquid chromatography (LC and HPLC).
The method is essentially chronoamperometry on a owing sample.
A owthrough cell must be purchased or constructed.
Chart can be set up to drive the potentiostat at a constant potential for
an indenite period. Alternatively the potentiostat can be set to
provide a xed potential. The potential is chosen such that the
substrate will be oxidised or reduced as it passes through the
electrochemical cell. The current is monitored continuously. As the
substrate passes through the cell an increase in the current occurs, the
current then peaks and subsides as the substrate is pushed out of the
cell by new carrier solution.
Chart can also be used to monitor the outputs of other detectors
connected to other channels of the PowerLab. Thus using a
PowerLab/400 you could monitor output from an electrochemical,
uv-visible, refractive index, and uorescence detector, simultaneously.
In addition four virtual channels of data can be constructed using the
computed functions dialog to monitor the integrated signals (or their
differentials) from each of the detectors. Refer to the Chart User's
Guide for further details.
For more extensive chromatographic use, PowerChrom software is
also available for use with PowerLab units. It can acquire and analyze
181
Biosensors
Biosensors are usually of the potentiometric, amperometric or
conductiometric varieties (see the following sections). Usually
ordinary pH meters or high impedance voltmeters can be used for the
potentiometric type. The amperometric variety usually require a
special meter that has an adjustable polarizing potential and a
variable gain ranges suitable for the currents being measured (see
Appendix F). The conductiometric types may work with an ordinary
conductivity meter but may have special requirements in terms of the
frequency of AC excitation or the range of conductances to be
measured. Any biosensor meter with an analog recorder output can
be connected to a PowerLab unit.
Potentiometric sensors
As their name suggests these sensors measure potential, and there
output can always be monitored in units of millivolts or volts. In
some cases it is more convenient to convert this signal to alternative
units such a pH or log[Na] to give a more direct indication of the type
of measurement being carried out. Virtually all these sensors can be
monitored by connection to a pH meter or other high impedance
voltmeter.
pH Electrodes
The impedance of the PowerLab inputs is 106 which is unsuitable
for direct connection to the very high impedance signals produced by
glass pH electrodes. For these electrodes a high impedance
preamplier (a pH or ISE meter with an impedance of >1012 ) must
be used between the electrodes and the PowerLab. The
ADinstruments pH Amp is also suitable for most pH and
182
Figure 812
Setting up Units Conversion
for a meter with a known
voltage/pH relationship of
pH 14 = 1400 mV.
183
Electrode Behaviour
The behaviour of an ideal pH, or ion sensitive, electrode is
characterised by the Nernst equation. This describes the relationship
between observed potential and ion activity.
RT
E = E 0 ------- pY
nF
where
E
E0
R
T
F
184
Both single and two point calibration assume that the electrode has a
linear response to ion activity. Experimentally there will always be
some deviation from linearity in the response. This is most noticeable
at very high or low concentrations. In these instances a non-linear
calibration technique must be used for accurate work.
If you need to calibrate an electrode directly in terms of ionic
concentration (or log of concentration) rather than activity, a nonlinear calibration is also needed. The Chart Mutipoint calibration
extension can perform this sort of non-linear calibration.
185
Figure 813
Selection of data from
potassium selective electrode
186
Figure 814
Setting up multiple point
calibration
187
Figure 815
Selecting a calibration
function.
Choose the
function to t
the calibration
data
Drag the axis tick labels to stretch
and compress the axes
Type in you own title
188
The Print button allows printing of the calibration curve for quick
reports, while the Copy... button allows the graph to be copied either
as a picture, or as the text of the calibration data in the small
spreadsheet. Clicking OK returns you to the main Multi Point
Calibration dialog Figure 814.
When the OK button is clicked in the main Multi Point Calibration
dialog, Figure 814, then the calibration calculation will be applied to
the entire channel, Figure 816. You can always revert to the original,
uncalibrated, data by selecting No Calculation in the channel menu.
Figure 816
A view of the calibrated data
in Figure 813.
189
turned off unless you want to use it. If you are using an
ADInstruments pH Amp then follow the instructions in its Owners
Manual to set it up.
Set the PowerLab channel input range to an appropriate range
(usually 500 mV for pH readings in the range pH 0 14). Because
readings from pH and ISE electrodes take several seconds or even
minutes to stop drifting, slow sampling rates in Chart are usually
employed (2 samples per second or less is adequate).
The electrode is placed in a buffer solution of known pH and the
response is recorded using Chart until a steady reading is obtained. If
you are performing two point calibration the electrode is then placed
in a second buffer solution while still recording.
Figure 817
Signal from a pH electrode in
two different calibration buffer
solutions
Figure 818
Setting up electrode
calibration with the pH
extension
191
Ionic Charge
The n pop-up menu lets you set the value for the number of electrons
transferred at the electrode. This usually corresponds to the charge of
the ion be measured. You can choose a value between 3. For pH
measurements this value should be set to +1. The value of n is used
internally to calculate the response of the electrode using the Nernst
equation.
Calibration Temperature
The temperature of the solutions used for calibration is entered in this
text box. Units of Celsius, Kelvin or Fahrenheit can be selected. The
buffer solutions you use should have accurately known values at the
temperature at which the calibration is performed.
192
Figure 819
Viewing the response graph
Electrode
parameters are
reported
Calibration point
coordinates are
reported
Print or copy
the calibration
Calibration points
Drag the tick labels
to stretch and
compress the axes
193
The vertical axis of the plot will be automatically scaled to the full
scale range that the data was recorded at. So, for instance, if you were
recording on the 500 mV range then the scale would have a range of
500 mV. If the response does not go anywhere near the current full
scale range you can drag or stretch the vertical axis to obtain a more
detailed plot.
The horizontal axis represents the ionic concentration and is by
default pH. In the case of pH the horizontal scale will be
automatically scaled to be between 0 and 14 pH. This scale can also be
dragged or stretched to view the response plot in more detail. The
small arrow pop-up menu next to the horizontal axis allows you to
use the set scale feature to adjust the axis between two values.
The electrode response dialog can be copied to the Clipboard for
export to a word processor or another application or can be printed
for a permanent record. The title area at the top of the dialog is
editable so that an electrode serial number or other information can
be entered instead of the default title.
Temperature Compensation
There will be times when pH or other ISE measurements will be
made at temperatures other than the temperature under which
calibration was performed. The greater the change in temperature
from the calibration temperature the greater the error in the electrode
reading. Also the further away from the isopotential point the greater
the error. To overcome this problem most pH meters provide a
method for temperature compensation using the Nernst equation as a
basis for compensation.
The pH extension offers both Manual and Automatic Temperature
Compensation (MTC and ATC). Both MTC and ATC corrections can
be turned off so you can return to the uncompensated data.
194
alter the electrode response to suite the new temperature using the
Nernst equation. Note that this mode is not suitable if the
temperature is going to change signicantly during recording. You
should use the ATC mode in this case.
To use MTC make sure that temperature compensation is enabled by
placing a tick mark in the Temp. Compensation check box. Then
select the Manual radio button. The temperature at which recording
will take place or has taken place should be entered in the text entry
box next to the Manual option.
A temperature (other than the calibration temperature) is entered.
When the View Response button is clicked the electrode response
dialog will display two plots: one representing the response at the
calibration temperature; and a second plot showing the response at
the specied temperature, Figure 820.
The calibration response can be identied as the line with one or two
calibration points on it. These are represented as large dots. The
information displayed on the right of the dialog shows the calibration
points and the values used for the Nernst equation.
Response at 65 C
Isopotential point
Figure 820
Electrode response graph
with Manual Temperature
Compensation
Response at 25 C
195
Figure 821
Warning dialog if Automatic
Temperature Compensation
is attempted without first
setting up a temperature
channel
Isopotential Point
The isopotential point of the electrode is that potential which remains
constant as the temperature changes. Most pH electrodes are
constructed so that the isopotential point is about 0 mV (which for
most pH electrodes also corresponds to pH 7). But it is usual, even in
196
or
or
pH = (E E01)/slope1
pH = (E E02)/slope2
where
slope1 = RT1/nF
and
slope2 = RT2/nF
At the isopotential point both potential and pH are constant for both
T1 and T2, that is E = Eip, and pH = pHip. From the above equations
we derive:
( E ip E 01 )
( E ip E 02 )
-------------------------- = -------------------------slope 1
slope 2
which can be solved for Eip:
( E 01 E 02 )
E ip = -------------------------------------slope 1 slope 2
or:
( E 01 E 02 )nF
E ip = ---------------------------------R(T 1 T 2)
For best results ensure that T1 and T2 are at least 20 degrees apart.
Potentiometric Titrimetry
The ADInstruments Pump, can be used to deliver 50 L aliquots of
titrant to a vessel with a coefcient of variability of 0.3%. It is suitable
197
Conductivity Sensors
Conductivity measurements are usually performed with a pair of
platinum plate electrodes. The conductivity meter provides a small
amplitude AC signal from 50 1000 Hz (to prevent hydrolysis of the
solution) and should provide a recorder type signal that is
proportional to the conductivity of the solution. The Units
Conversion feature of Chart can be used to perform two point
calibration of the signal which is satisfactory for most uses. If
multiple point or non-linear calibration is required then the Chart
MPCalibration extension can be used. See Application Note AN112
(downloadable in Adobe Acrobat pdf format from
[Link]
198
199
200
Corrosion Measurements
EChem can be used to drive a potentiostat to perform simple
electrochemical corrosion experiments. Because very slow scan rates
are employed make sure that you are running EChem in slower speed
mode (100 Hz, 400 Hz, or 1000 Hz) when attempting these
experiments or you are likely to encounter warning messages saying
that the sampling periods are too long.
In addition PowerLab with Chart and Scope software can be used to
monitor potentiostat systems replacing existing XYT plotters and
chart recorders. In general Chart will be more useful than Scope for
these techniques as the slowest Scope can be run at is 2 Hz for 2560
points, a total of 20 minutes per scan. Chart can be run as slow as 12
points per hour for an indenite period.
Choice of Potentiostat
The American Society for Testing and Materials (ASTM) has put
forward several standard protocols performing corrosion
experiments. The ADinstruments Potentiostat meets the
requirements of ASTM G587 for potentiostatic and potentiodynamic
polarization measurements ASTM G6186 for cyclic potentiodynamic
polarization measurements, and ASTM G5991 for polarization
resistance measurements. However you should note that this requires
that the potentiostat have a maximum current rating of only 100 mA.
If you require a potentiostat with greater capability then consult
Chapter 9 for a suitable instrument that will be compatible with
PowerLab. Also the ADinstruments Potentiostat provides a signal
that is proportional to current. Some third party potentiostats have an
option so that a recorder signal proportional to log of the absolute
current can be obtained. By using such a potentiostat with EChem,
Chart, or Scope, the PowerLab system will be able to present data as
log of current versus potential.
See ASTM Designation G15 90a for standard terminology relating to
corrosion experiments, and also ASTM G3: Practice for Conventions
Applicable to Electrochemical Measurements in Corrosion Testing.
For most experiments the value of Ecorr must rst be determined by
measuring the resting potential of your system. This is usually done
Chapter 8 Additional Techniques
201
Potentiodynamic Polarization
This is essentially Linear Sweep Voltammetry at very slow scan rates,
typically 0.6 V/hour 0.16667 mV/s, over a potential range that is up
to Ecorr 500 mV.
The potential range should be limited so that extensive water
hydrolysis does not occur as this is likely to produce large currents
that may overload the potentiostat, while bubbles on the working
electrode may alter the rate and type of corrosion taking place, as well
as interrupting current ow and causing a noisy signal. Also the use
of larger potentials than necessary may also accelerate corrosion to
the extent that the surface of the working electrode is altered
sufciently so that results cannot be reproduced.
This type of scan can also be set up using the Multi Pulse technique.
EChem should be run at slower speeds (100 Hz 1 kHz mode) for
these types of experiment to enable longer step widths and data
sampling periods to be used.
The output from EChem is displayed as current versus the potential.
If you wish to display the results as the log of current density versus
potential then the data should be transferred to a third party
graphing program, for example IGOR Pro. A set of macros for IGOR
Pro are available from your ADInstruments dealer to facilitate
plotting of the data in this format.
If you are used to performing this type of experiment with analog
potentiostats then you may wish to do several comparison runs with
known materials to compare results. EChem generates a staircase
ramp and samples the current over a xed period of time at a
constant potential then averages the current value at each potential.
This may lead to smoother graphs and more reproducible results than
you are accustomed to. Make the sampling period a multiple of 20 ms
(if you use 50 Hz mains) or 16.7 ms (if you use 60 Hz mains) to
eliminate noise due to mains hum.
202
Polarization Resistance
See ASTM Designation G59 91 for a description of the standard
practice. This experiment is simply Linear Sweep (or Cyclic)
Voltammetry over a restricted potential range (usually Ecorr 30 mV)
at slow scan rates, typically 0.6 V/hour. This can be performed using
EChem software after rst determining Ecorr with a potentiodynamic
polarization scan, or with a high impedance voltmeter.
Make sure that EChem is running in a slower mode (100Hz 1kHz)
when performing these experiments. This technique can also be set
up in the Multi Pulse technique. Results are usually plotted as current
versus potential.
203
204
C H A P T E R
T W E L V E
This chapter takes a look at some of the third party equipment that is
compatible with a PowerLab unit using EChem, Chart, or Scope
software. PowerLab units can also be used with many patch, voltage,
or current clamps such as those made by Axon, Warner, or WPI.
For very low current (picoampere range) work look for the release of
our special low current Picostat (under development at time of
writing).
205
Introduction
There is an extensive range of potentiostats manufactured by third
parties that are compatible with PowerLab. In most cases all that is
required is a simple cable connection to the PowerLab.
A range of adaptor cables can also be purchased from your
ADInstruments dealer.
EG&G PARC
Many of the potentiostat models made by EG&G Princeton Applied
Research (PAR) are suitable for connection to PowerLab systems. A
brief summary of the different PAR models that can be connected to
PowerLab is given in Table 71 at the end of this section. More
information can be found at [Link]
206
The 263, and 273 series of potentiostats would normally used with
PAR's own programs via their inbuilt GPIB IEEE interfaces and an
IBM clone computer. However, they can also be used with a
Macintosh computer and a PowerLab. You may prefer to use the
potentiostat in its stand alone mode and use the combination of
Scope/Chart and a PowerLab for plotting your data rather than a
standard XY plotter, or you can control the potentiostat by generating
stepped and pulsed waveforms with EChem. The MLC01 Cable Kit
is available to connect your PowerLab to this instrument.
207
208
209
210
yes
10 V
30 V
1 A to
1A
feedback
External input
Voltage range
Compliance
Current ranges (full
scale)
iR compensation
feedback
1 A to
1A
30 V
10V
yes
0.1 mV/s
to 5 V/s
yes
yes
yes
362
none
1 A to
1A
10 V
2 V
yes
0 to
1 V/s
yes
yes
yes
366
feedback/
current
interrupt
100 nA to
100 mA
20 V
8 V
yes
Processor
controlled
yes
yes
yes
263
current
interrupt
1 A to
250 mA
20 V
10 V
yes
Processor
controlled
yes
yes
yes
VersaStat
feedback
1 nA to
5A
100 V
5 V
yes
0.1 mV/s
to
500 mV/s
feedback
100 A
to 1 A
100 V
5 V
yes
no
yes
yes
yes
yes2.
173
yes
170
feedback
with /50
option
20 nA to
10 mA
80 V
5 V
yes
0.1 mV/s
to
500 mV/s
yes
yes
yes
174
feedback/
current
interrupt
100 nA to
100 mA3.
100 V
10 V
yes
Processor
controlled
yes
yes
yes
273 &
273A
none
100 nA
to 5 mA
10 V
10 V
yes
1 mV/s
to 10 V/s
yes
yes
yes
264A
none
100 nA
to 100 A
10 V
2 V
no
1 mV/s to
100 mV/s
no
no
yes
400 LC
Detector
Notes: 1. These specications should be veried by the manufacturer, specications may change at short notice; 2. The external input should be modied to accept DC signals as
described in section III, pages 1 & 2 of the PAR 170 instruction manual; 3. Ranges of 10 A and 1 nA can be selected if the instrument is controlled by PARs own software.
no
yes
PowerLab as
waveform generator
Inbuilt scanning
yes
363
PowerLab as plotter
Feature
Model
Table 101
Comparison table for EG & G
PARC equipment. 1
BAS Equipment
Refer to Table 92 at the end of this section for a table of equipment
made by Bioanalytical Systems Inc. (BAS) at its compatibility with
PowerLab. Also see [Link]
The CV1B is BAS's most basic unit and is widely used in teaching
laboratories. It is greatly enhanced by connecting its recorder outputs
to a PowerLab and recording data with Chart or Scope software. It is
not suitable for control with EChem. The MLC06 Cable Kit is
available to connect your PowerLab to this instrument.
To set up scan limits, connect the CV1B to the PowerLab, I output to
Channel 1 and E output to Channel 2. Now open the Input Amplier
on Channel 2. Adjust the scan limits of the CV-1B while using the
Input Amplier window to monitor the value of the potential.
211
PowerLab unit, and with EChem, Chart, or Scope, software you can
perform very low current (sub nA) work with microelectrodes. Note
that you do not need to purchase a separate potentiostat! Low current
work generally requires the use of a Faraday cage and the low current
module is designed to be compatible with BAS's C2 Cell Stand. The
MLC04 Cable Kit is available to connect your PowerLab to this
instrument.
Model LC-44
The LC44 electrochemical detector is designed for liquid
chromatography. Both generator and detector current outputs can be
monitored with a PowerLab/200 and Chart, or the detector outputs
from two LC44's. With a PowerLab/400 the generator and detector
currents from two LC44's could be monitored. The MLC07 Cable
Kit is available to connect your PowerLab to this instrument.
If you are using an LC44 detector and a UV-visible or uorescence
detector you can monitor the outputs of any two detectors
simultaneously with Chart and a PowerLab/200. With a
PowerLab/400 you can monitor the output of up to four detectors.
Extra virtual channels are provided which can be used for on-line
integration of the incoming signals (using the Computed Input
feature).
Model RDE-1
The BAS Rotating Disk Electrode can be used with most potentiostats.
If your potentiostat is being used with a PowerLab/EChem system
then you can connect the RDE1 to the potentiostat and you will be
able to drive the RDE1 with EChem.
212
213
yes
0 to 10 V/s
no
3.75 V
0.5 A to
500 A
none
Inbuilt scanning
Inbuilt scan rate
External Input
Voltage range
Compliance
Current ranges
(full scale)
iR compensation
none
2 A to
120 mA
12 V
5 V
yes
0.1 mV/s
to 4 V/s
yes
yes
yes
CV-27
none
0.2 nA to
12 A
10 V
5 V
yes
0.1 mV/s to
400 mV/s
yes
yes
yes
CV-37
none
10 mA to
1A
85 V
10 V
yes
no
yes
yes
PWR-3
Notes: 1. These specications should be veried. Specications may change at short notice.
no
yes
CV-1B
PowerLab as waveform
generator
PowerLab as plotter
Feature
none
10 pA to
12 A
12 V
yes
no
yes
yes
Low
Current
Module
Model
feedback
100 nA to
100 mA
10 V
3.276 V
no
Processor
controlled
yes
no
no
50W
no
Processor
controlled
yes
no
no
100
feedback
100 nA to
100 mA
12 V
3.276 V
yes
1 mV/s to
10 V/s
yes
yes
yes
100A & B
none
0.1 nA to
50 A
2 V
yes
no
yes
yes
LC-44
LC
Detector
Table 102
Comparison table for BAS
equipment. 1
PINE Equipment
Table 93 provides a comparison of different potentiostats offered by
the PINE Instrument Company, [Link]
Table 93
Comparison table for PINE
equipment
AFCBP1 &
AFCBP1E
Feature
AFRDE5 &
ARFDE5E
PowerLab as plotter
yes
yes
yes
yes
inbuilt scanning
yes
yes
0 to 1 V /s
0.01 to 10 V /s
external input
yes
yes
voltage range
10 V
10 V
100 nA to 1 A
100 nA to 1 A
iR compensation
no
no
Note: These specications should be veried. Specications may change at short notice.
214
Metrohm Equipment
CAUTION
Some of these
combinations have
compliance voltages up to
90 V and are a shock
hazard. They should be
used only after thoroughly
reading the instruction
manual and being
thoroughly acquainted
with the possible hazards.
215
Schlumberger Equipment
Model 1186 potentiostat
Schlumberger potentiostats (such as the 1186) are compatible with
PowerLab and EChem. The MLC-01 Cable Kit is available from your
ADinstruments representative to help you connect your PowerLab to
these systems.
Radiometer Equipment
Model PGP201 potentiostat
This instrument is a potentiostat/galvanostat which can be used with
Chart, Scope, and EChem. The MLC-01 Cable Kit is available from
your ADinstruments representative to help you connect your
PowerLab to these systems.
Table 94
Features of the Radiometer
PGP201
potentiostat/galvanostat
Feature
PGP201
PowerLab as plotter
yes
yes
inbuilt scanning
yes
external input
yes
voltage range
4.095 V
compliance
20 V
1 A to 1 A
iR compensation
none
Note: These specications should be veried. Specications may change at short notice
216
HEKA Equipment
Models PG28.. series potentiostats
The HEKA potentiostats in the PG28 system are all compatible with
PowerLab and Chart and Scope for data collection. In addition they
can also be used with a PowerLab and EChem so that you can use
them as part of a computer controlled system. The MLC-01 Cable Kit
is available from your ADinstruments representative to help you
connect your PowerLab to these Heka systems.
The basic system comprises modules from the series 100 control
ampliers and the series 200 current ampliers. In addition the 300
series modules, trigger pulse and scan generators; 400 series modules,
current integrators; and 500 series module, digital display; can also be
added. Consult [Link] more details.
Table 95
Features of HEKA
potentiostats
Feature
PG28
PG28../5A
PG28.B
PG284
PG285
PG287
PowerLab as plotter
yes
yes
yes
yes
yes
yes
PowerLab as waveform
generator
yes
yes
yes
yes
yes
yes
Inbuilt scanning
no
no
no
yes
yes
yes
1 mV/s to
1 kV/s
1 mV/s to 1
kV/s
1 mV/s to
1 kV/s
External Input
yes
yes
yes
yes
yes
no
Voltage Range
10 V
5 V
2 V
10 V
90 V
10 V
1 A to
2A
1 A to
2A
1 A to
200 mA
1 A to
1A
1 A to
1A
1 A to
1A
iR Compensation
feedback
feedback
feedback
feedback
feedback
feedback
Note: These specications should be veried. Specications may change at short notice.
217
Omni 90 Potentiostat
The Omni 90 is a simple potentiostat with inbuilt analog scanning
and also able to accept an external input. It can be used with
PowerLab replacing the XY plotter or chart recorder with Scope and
Chart software, or can be used with EChem software so that stepped
ramp and pulse voltammetry can be performed. The MLC-01 Cable
Kit is available to connect your PowerLab to this instrument.
CS 1000 Galvanostat/Coulometer
The CS1000 can be used with PowerLab replacing the chart recorder
with Chart software.
EI 400 Bipotentiostat
The EI 400 is an analog bipotentiostat (which can also be used as a
single potentiostat) with inbuilt analog scanning and also able to
accept an external input. It can be used with PowerLab replacing the
XY plotter or chart recorder with Scope and Chart software, or can be
used with EChem software so that stepped ramp and pulse
voltammetry can be performed. It is also suitable for use with
microelectrodes.
218
Table 96
Features of Cypress
Systems instruments.
Model
Feature
Omni 90
Omni 101
CS 1000
EI 400
PowerLab as plotter
yes
yes
yes
yes
PowerLab as waveform
generator
yes
yes
no
yes
Inbuilt scanning
yes
yes
no
yes
<100 mV/s to
1000 V/s
no
yes
yes
yes
Voltage range
2.5 V
2 V
Compliance
10 V
15 V
18 V
10 V
Current ranges
0.01A to 100mA
100nA/V to
100mA/V
100 A/V to 1 A
iR Compensation
no
no
no
no
10 V
Note: These specications should be veried. Specications may change at short notice.
219
AMEL Equipment
Latest information on AMEL potentiostats can be found at
[Link]
220
Table 97
Features of AMEL
instruments.
Model
Feature
2049
2051
2053
2055
PowerLab as plotter
yes
yes
yes
yes
PowerLab as waveform
generator
yes
yes
yes
yes
Inbuilt scanning
no
no
no
no
External Input
yes
yes
yes
yes
Voltage range
5 V
5 V
5 V
Compliance
22 V
27 V
50 V
30 V
Current ranges
1A to 1 A
1A to 1 A
1A to 1 A
100 A to 10 A
iR Compensation
no
no
yes
no
Note: These specications should be veried. Specications may change at short notice.
221
222
A P P E N D I X
Menus
The menus shown here are similar to how they will appear when you
rst use EChem. If your copy of EChem has previously been used by
someone else it may appear differently if the EChem menus have
been customized. EChem has six standard menus: File, Edit,
Technique, Display, Windows, and Macro. Some of the menu
commands shown will change or be disabled depending on the active
window and what, if anything, is selected. An ellipsis, three dots (),
after a menu command indicates that it brings up a dialog box; a tick
to the left of the command indicates that it is currently active; and a
keyboard equivalent, if there is one, is shown to the right.
Figure A1
The File menu
223
Figure A2
The Edit menu
Figure A3
The Preferences submenu
Figure A4
The Technique menu
224
Figure A5
The Display menu
Figure A6
The Windows menu
Figure A7
The Macro menu
Figure A8
The Macro Commands
submenu. The Speak
Message and AppleScript
commands are available only
on Macintosh systems.
225
Keyboard Shortcuts
The Command-key ( or ) on Macintosh, or the Control-key on
Windows PC, menu command equivalents are shown in Table A1.
Your copy of EChem may be set up differently if it has been
customized. Some of the Command-key equivalents will also change
or be disabled depending on the active window and what, if
anything, is selected. Their functions are discussed elsewhere in this
users guide.
Table A1
EChem keyboard short-cuts
for Macintosh. Use the
Control key on a Windows
PC, or the - or -key on
a Macintosh. The list is
alphabetical so that you can
see at a glance which keys
have been used for menu
commands
Keystrokes
Function
CommandA
Overlay all
CommandB
Clear data
CommandC
Copy to Clipboard
CommandE
CommandH
Overlay none
CommandN
New
CommandO
Open
CommandP
CommandQ
Quit EChem
CommandR
CommandS
Save file
CommandV
Paste
CommandW
CommandX
Cut page
CommandZ
Command\
CommandPeriod (.)
CommandSpacebar
Start/stop sampling
CommandRight arrow
Go to last page
CommandLeft arrow
Go to first page
Standard keyboard short-cuts for dialog boxes also apply: Tab moves
the insertion point to next text entry box; Enter or Return is the same
as clicking the OK button; and Esc or Command-period (.) or Controlperiod, is the same as clicking the Cancel button.
226
A P P E N D I X
Troubleshooting
Technical Support
EChem has been extensively tested to make sure that it runs smoothly
and without difculties. Occasionally, however, problems may arise
or something unexpected may occur. The second part of this
appendix gives a list of possible problems and likely solutions: you
should look there rst to see if your needs are addressed specically.
If you are experiencing difculties with EChem that are not covered
in this users guide, or you need technical assistance with your
system, then ADInstruments and its authorised distributors are glad
to help. The About EChem dialog box provides dealer and distributor
addresses and the required system conguration information. To
access this information, select the About EChem command from
the Apple () menu on a Macintosh, or go to the Help menu on a
Windows computer (click the dialog box when you have nished to
make it go away).
Figure B1
The About EChem dialog box
Release date
227
Figure B2
The ADInstruments Distributor
Addresses dialog box
228
Model of
PowerLab (if
connected)
Figure B3
The About This Computer
dialog box
Information about
computer
List of system
extensions
(Macintosh only)
Click to copy
information
Click to print
information
General
We welcome customer comment. You dont have to wait until you can
send a software problem report or return damaged hardware! If you
have comments or suggestions you would like to make about the
EChem application or this users guide, please feel free to write to us
directly in Australia or New Zealand, or through your local
PowerLab dealer. We value your responses, and they are taken into
account when future releases are being worked on.
Starting Up
Start-up errors are mostly hardware problems, and are dealt with in
detail in your PowerLab Owners Guide, but are briey covered here.
Appendix B Troubleshooting
229
Ensure that the cable is rmly attached at both ends and try
again. If there is still a problem, try a new cable.
Turn off the computer and PowerLab (and any other devices in
the SCSI chain), and then turn the PowerLab back on again after
at least ten seconds. Turn on the computer and try using EChem
again.
SCSI problems: two SCSI devices on the bus have the same SCSI ID,
or termination is incorrect.
Check that each device has a unique ID number and that the SCSI
chain is terminated correctly.
Check that each device has a unique ID number and that the SCSI
chain is terminated correctly.
230
Interface Problems
Some data display areas show gray
The Zoom window needs a selection (at least four data points) in the
EChem window before it can display anything. Zooming within the
Zoom window changes the selection in the EChem window, and may
reduce the selection too far.
Appendix B Troubleshooting
231
Choose Stop Recording from the Macro menu, and discard the
macro, since it will likely be of little use.
Look at the menus and compare them with Table A1. See below
for resetting procedures.
232
Ensure that the cable is rmly attached at both ends and try
again. If there is still a problem, try a new cable.
If you are using a SCSI interface ensure that the SCSI chain is
terminated correctly.
Appendix B Troubleshooting
233
If the Macintosh has little free RAM space, you might want to
turn off unused applications, reduce the size of the RAM cache or
remove non-standard extensions or inits from the system. See
your computers Users Guide for more details.
When multiple sweeps are taken, data compression is only done after
all the pages have been sampled. EChem uses a reasonable amount of
memory for an off-screen buffer: if the EChem window is large and
the display is grayscale or color, more memory is used, especially if
thousands or millions of colors (16 bit or more) are selected for
display.
Shrink the EChem window and change the display from colour or
grayscale to black and white, or at least reduce the colour depth.
Printing Problems
Only one page printed, although a page range was specied
EChem adds to the bottom of the Print dialog box a dividing line and
the Print Current Page Only checkbox, which is on by default. When
the checkbox is on, the active page prints regardless of the range, if
any, specied in the dialog box.
To print a range of pages, turn off the Print Current Page Only
checkbox, and enter the numbers as usual.
Printing is slow
If getting a hard copy of your EChem pages quickly is important,
there are a number of things you can do.
234
First, work in black and white, not gray-scale or color, and use the
Waveform Print Layout buttons to minimize the number of sheets
of paper to printed. On Macintosh turn off Background Printing
in the Chooser: although it is useful to print in the background,
spooling the document takes time. Ensure that you are using the
latest printer driver (the LaserWriter 8 software, for instance, is
considerably faster than the LaserWriter 7 software).
Macro Problems
Macros behave unexpectedly
Make sure that you have the right macro, not a different one of
the same name (in the case of name conicts, the latest macro
loaded into memory is used).
Check that you have the steps and effects recorded somewhere,
and that you havent remembered them incorrectlyit is very easy
to do.
Appendix B Troubleshooting
235
Crashes
Note
EChem checks itself on
start-up for damage or
virus infection, and will
present an appropriate
alert box if it detects a
problem. (Files are not
checked, though.)
Turn off screen savers. On a Macintosh try also turning off system
extensions to see if this xes the problem. See your computers
manual for more details on this problem and how to deal with it.
The data or settings le you are using may have become corrupted,
possibly through disk damage, especially if it is on a oppy disk.
236
Noise
The detection of small current signals can be hampered by a relatively
large amount of noise. The determination of the source(s) of the noise
and its elimination can be a time consuming task. The following
advice is meant only as a guide to the likely sources of noise and is by
no means a comprehensive list.
If you are using the ADInstruments Potentiostat, much high
frequency noise can be effectively removed by setting the 10 Hz lter
setting. Remember, however, that this lter will affect results from
experiments that use short pulses (< 0.1 s), or fast scan times and
should not be used under such conditions.
EChem voltammograms show unexpected oscillations
The noise on the raw signal is probably large. Check by opening the
Input Amplier or Potentiostat dialog and examining the raw signal
at the same gain range as your experiment.
If the noise is 50 Hz or 60 Hz mains interference then the regular
sampling periods of EChem can cause an aliasing effect which may
produce low frequency oscillations in the voltammogram. In this case:
Appendix B Troubleshooting
237
Make sure that power cables are positioned well away from your
experiment and the electrodes.
238
potentiostat all into this one board. Try running your experiment
with nearby equipment switched off.
Noise with no apparent cure
Aluminium foil wrapped around the electrochemical cell and
grounded at a single common place may help. Placing the
experiment, potentiostat, MacLab or PowerLab, and even the
computer on a single large grounded copper sheet may reduce noise
levels markedly. In very low current or very noisy situations you may
have no alternative but to enclose your experiment in a Faraday cage.
Commercial cages are available but they will work no better than one
made by a local tradesperson from sheet metal or copper mesh. It
may also be useful to position the potentiostat within the cage. In a
large laboratory a small garden shed could be used as a walk-in cage.
Appendix B Troubleshooting
239
240
A P P E N D I X
Technique Summary
This Appendix provides a quick reference to the techniques provided
in then EChem Technique menu. It is not a replacement for the detail
given in Chapter 7. If you need more detail please refer to the
appropriate technique in Chapter 7.
241
Parameter
Values
Comments
Range
Initial Potential
between 1, 2 or 5 V
Final Potential
between 1, 2 or 5 V
Must not be the same as the initial potential. It can be more negative or
positive than the initial potential.
Scan Rate
Step Width
0.1 ms
Step Height
1-2 mV is ideal
Samplig Period
0.1 ms
Steps
automatically set
Rest Time
15 s is usual
242
The length of time the potential is kept at the initial potential before the
scan is started.
Values
Comments
Range
2000 mV is typical
Initial Potential
between 1, 2 or 5 V
Final Potential
between 1, 2 or 5 V
Frequency
1060 Hz is typical
Step Height
1 mV
Steps
automatically set
SW Ampl.
1050 mV is typical
Sampling Period
0.1 ms
Current data will be collected and averaged over this period which
occurs at the end of each step (upper and lower). The sampling
period should be significantly shorter than the step width in order for
the charging current to decay. Use 20 ms at 50 Hz power, or 16.7 ms
at 60 Hz power, to minimise mains hum interference (visible as
oscillations on voltammogram).
Rest Time
15 s is typical
243
Table C3
Pulse Voltammetry parameter
reference
Parameter
Comments
Range
2000 mV is typical
Initial Potential
between 1, 2 V or 5 V
Final Potential
between 1, 2 or 5 V
This is the height of the last pulse to be applied. It can be thought of as the
height of an imaginary ramp passing through the tops of the pulses.
Scan Rate
Usually this parameter is allowed to vary as the Step Width and Step Height
are set.
Step Width
24 s is typical
This is the period of a single step (including the pulse time). Much shorter
times can be used with microelectrodes.
Step Height
10 mV is typical
Steps
automatically set
Pulse Width
5100 ms is typical
Rest Time
several seconds
This is the period between when the deposition potential is applied and the
scan commences. It allows the solution to come to equilibrium after the
initial potential is applied.
Sampling Period
0.1 ms
244
Comments
Range
Initial Potential
between 1, 2 or 5 V
Final Potential
between 1, 2 V or 5 V
Scan Rate
Increasing the scan rate decreases peak resolution. However very slow
scan rates mean inordinately long analysis times
Step Width
0.54 s is typical
The time of each step (including pulse time). This is also the period
between pulses. This parameter is usually allowed to vary while the Scan
Rate and Step Height are set. Much horter times can be used with
microelectrodes.
Step Height
110 mV is typical
Steps
automatically set
Pulse Height
50100 mV is typical
The height of the pulse superimposed upon the potential ramp. A positive
peak height indicates a pulse in the direction of the applied ramp. Larger
values increase sensitivity (bigger peaks). Smaller values improve
resolution. The Pulse Height must be greater than the Step Height or the
next step will be bigger than the previous pulse.
Pulse Width
20100 ms is typical
The pulse should last long enough to allow the non-faradaic components
of the current to decay before sampling, this usually requires that the
Pulse Width is at least 5 ms longer than the sampling period - the larger
the area of the electrode the longer this will need to be. For a standard
glassy carbon electrode with an area of ~1 mm the pulse should be at
least 20 ms wide. Much shorther times can be used with microelectrodes.
Rest Time
15 s
The period before the scan commences when the initial potential is
applied.
Sampling Period
120 ms typically
2000 mV is typical
245
Cyclic Voltammetry
The potential is driven between two limits at a constant rate, similar
to linear sweep voltammetry. When a limit is reached the potential is
swept back again at the same rate. The experiment can start at any
potential (initial potential) between the two limits. The current is
sampled at the end of each potential step.
Table C5
Cyclic Voltammetry
parameter reference
Parameter
Values
Comments
Range
2000 mV is typical
Initial Potential
between 1, 2 or 5 V
Final Potential
Upper (Potential
Limit)
between 1, 2 or 5 V
maximum potential that will be achieved in a cycle and can be any value
Lower (Potential
Limit)
between 1, 2 or 5 V
minimum potential that will be achieved in a cycle. Note that the difference,
Upper-Lower potential, must be less than 4 V if the 2000 mV range is
selected, and less than 10 V if the 5000 mV range is selected.
Scan Rate
101000 mV/s
Faster scan rates can be selected but (depending on the scan width) you
may find that the step height is unacceptably high.
Step Height
1 mV
Step Width
2 ms
Samplig Period
0.1 ms
Rest Time
1s
Period between when the Potential is applied and the scan commences.
Deposition
Potential
Deposition Time
This is a period before the Rest Time. Can be used for stripping methods.
Cleaning Potential
The Cleaning Potential can also be set to a value to oxidise (or reduce) any
material that has plated out on the working electrode. The potential applied
during the Cleaning Time.
Cleaning Time
This is a period after the Final Potential has been reached. Can be used for
stripping methods.
246
Comment
Range
Initial Potential
between 1, 2 or 5 V
Final Potential
between 1, 2 or 5 V
Must not be the same as the initial potential. The final potential may
be either more negative than the initial potential (negative scan) or
more positive than the initial potential (positive scan).
Scan Rate
Step Width
2 ms
Step Height
dependent on experiment
Steps
automatically set
Rest Time
Table C7
Multi Pulse parameter
reference for defining pulses
Pulse Parameters
Pulse Start
the length of time the potential is kept at the initial potential before
the scan is started
Dening Pulses
Values
Comments
The timing of each pulse is linked to the start of each step in the
base ramp. For example if you enter 20 ms in the Start box it
means the pulse will be activated 20 ms after the beginning of the
step. The pulse can begin at any time during each step
Pulse Height
this is the height of the pulse above (or below) the step.
Increment
Duration
the duration of the pulse must be such that the entire pulse occurs
within one step of the potential ramp
247
248
A P P E N D I X
Electrochemical
Equations
Linear Sweep and Cyclic Voltammetry
The Randles-Sevcik Equation
For a substrate with a reversible redox reaction, at a planar disk
electrode, in an unstirred solution, the peak current during linear
sweep, or cyclic voltammetry, is given by the RandlesSevcik
equation:
3/
1/
1/
ipa = 269 n 2 AD 2 Cv 2
3/
1/
1/
ipc = 269 n 2 AD 2 Cv 2
0.0285
E pa = E 1/2 + ---------------n
where
ipa = current peak during anodic scan (A)
ipc = current peak during cathodic scan (A)
E pa = potential at current peak for anodic scan (V)
Epc = potential at current peak for cathodic scan (V)
E 1/2 = half potential as determined by cyclic voltammetry (V)
249
ip v
mV (at 298 K)
250
where
Ep = potential at which the peak occurs
E 1/2 = the half wave potential (as might determined by cyclic
voltammetry)
hp = the height of the pulse.
nFAD 2 C ( 1 )
i p = --------------------------------------------------------------1
1
1000 2 ( t ) 2 ( 1 + )
where
t = time at which the current is rst sampled in each cycle
= time at which the current is sampled second in each cycle
( nFAh p )
-----------------------
= e 2 RT
n = the number of electrons transferred to (or from) the substrate
molecule
F = Faraday's constant, 96485 C mol-1
A = area of the exposed surface of the electrode (cm2)
D = diffusion coefcient of the substrate molecule (cm2 s-1).
C = concentration of the substrate molecule (mol L-1)
R = the gas constant, 8.314 J K-1 mol
T = the temperature (K)
251
Chronoamperometry
The Cottrell Equation
When chronoamperometry is performed on an unstirred solution at a
planar electrode the faradaic current response is described by the
Cottrell equation
1
nFAD 2 C
i = ------------------------------1 1
1000 2 t 2
where
n = the number of electrons transferred to (or from) the substrate
molecule
F = Faraday's constant, 96485 C mol-1
A = area of the exposed surface of the electrode (cm2)
D = diffusion coefcient of the substrate molecule (cm2 s-1).
C = concentration of the substrate molecule (mol L-1)
t = time (s)
The factor of 1000 is to bring both cm and dm (1 L = 1 dm3) in the
equation to common units.
In aqueous solution the coefcient of diffusion usually has a value of
between 10-5 and 10-6 cm2 s-1.
252
Chronocoulometry
The Integrated Cottrell Equation
The current response equation at a planar electrode for a
chronocoulometric experiment is the time integrated form of the
Cottrell equation:
Q =
2nFAD 2 Ct 2
-+k
i dt = --------------------------------------1
0
1000 2
where
Q = the number coulombs transferred
n = the number of electrons transferred to (or from) the substrate
molecule
A = area of the exposed surface of the electrode (cm2)
D = diffusion coefcient of the substrate molecule (cm2 s-1).
C = concentration of the substrate molecule (mol L-1)
t = time (s)
k = a constant.
Thus a plot of Q versus t1/2 should produce a straight line with an
intercept of k.
The constant k can be dened as:
k = nFA + Qdl
where
253
254
E
WARNING
All organic solvents are, to
a lesser or greater degree,
toxic, and many are
ammable. General safety
procedures include working
in a well ventilated area (a
fume hood is necessary for
all but the most benign
solvents), with hand and
eye protection (usually
rubber gloves and safety
glasses). Even if the solvent
is relatively harmless most
organic solvents can
penetrate the skin easily
carrying potentially toxic
solutes with them.
Similarly most electrolytes
used with organic solvents
are toxic and/or skin
irritants. Always
familiarize yourself with
the potential hazards by
reading the Materials
Safety Data Sheets
available from the suppliers
of solvents and electrolytes.
Always assume that new
compounds (for which no
safety data may be
available) are toxic and
handle them with due care.
A P P E N D I X
Cyclic Voltammetry,
Solvents & Electrolytes
Common organic solvents for cyclic voltammetry include methanol,
ethanol, propylene carbonate, 1,2-dimethoxyethane, acetonitrile,
acetone, dimethylsulfoxide (dmso), dichloromethane, dichloroethane,
and toluene. Polar and protic solvents exhibit lower resistivities than
non-polar and/or aprotic solvents. Unfortunately it is the more
resistive solvents in which common electrolytes are least soluble.
Remember that many of the constituent ions (both cations and
anions) of electrolytes are toxic and that when dissolved in organic
solvents they can be carried across the skin. Similar aqueous solutions
are usually much less of a hazard if skin contact occurs. However, in
all cases of accidental spillage where you do not know the specic
treatment, all contaminated skin areas should be continuously
ushed with copious amounts of water for at least several minutes.
For a a good general introduction to the use of non-aqueous solvents
see the Chapter 7, Solvents and Electrolytes in Electrochemistry for
Chemists, 2nd edition, D. T. Sawyer, A. Sobkowiak, and J. L. Roberts,
Wiley-Interscience New York, 1995.
Solubility Rules
Some generalised rules for solubility of electrolytes in organic
solvents are:
255
Solvent Stability
Amides, esters, nitriles, strained ethers, etc. are subject to hydrolysis
especially if traces of acid or base are present. Hydrolysis reactions
can be very slow (hours or days) and often manifest themselves as an
increase in background currents or a reduced redox stability window.
Remember that only a small fraction of the solvent need hydrolyze to
generate impurities that can be detected electrochemically but which
will remain unseen by nmr or infrared spectroscopy.
256
Cations
Complex cations are typically subject to reduction at sufciently large
potential, oxidation is usually less of a problem. Remember that only
a small proportion of the electrolyte needs to be electrolyzed to
produce a signal that will interfere with the analyte's signal. Some
large cations that can be employed are shown in Table E1.
Tetraalkylammonium salts are the most commonly used for organic
solvent work because of their relatively low cost and because they are
fairly resistant to reduction.
Table E1
Complex cations used in
background electrolytes
Cation
Formula
Mr
tetramethylammonium
[N(CH3)4]+
74.15
tetraethylammonium
[N(CH2CH3)4]+
130.3
tetra-n-butylammonium
[N(CH2CH2CH2CH3)4]+
242.5
tetraphenylphosphonium
[P(C6H5)4]+
339.4
Easily reduced.
Hydrolyzed by hydroxide.
benzyltriphenylphosphonium
[P(CH2C6H5)(C6H5)3]+
353.4
Easily reduced.
Hydrolyzed by hydroxide.
bis(triphenylphosphino)imminium
[(C6H5)3P=N=P(C6H5)3]+
538.6
tetraphenylarsonium
[As(C6H5)4]+
383.3
(18-crown-6)potassium
[K(C12H24O6)]+
303.4
(dibenzo-18-crown-6)potassium
[K(C20H24O6)]+
399.5
257
Comments
WARNING
Perchlorates are a known
explosion hazard and their
use should be avoided
wherever possible.
Especially avoid
evaporation of perchlorate
containing solutions and
clean up all spills
immediately.
Anions
Large anions may be subject to reduction or oxidation. Some anions
that can be employed as shown in Table E2. Perchlorate salts are a
known explosion hazard and should be avoided wherever possible.
Note that while nitrate is often considered safe to use, it is an
oxidizing agent. Its use as an electrolyte (at relatively high
concentrations) in organic solvents is a potential explosion/re
hazard, especially if traces of acid are present, or if the solution is left
to evaporate.
Table E2
Complex anions used in
background electrolytes
258
Anion
Formula
Mr
Comments
nitrate
NO3
62.00
perchlorate
ClO4
99.45
triflate
CF3SO3
149.1
methanesulfonate
CH3SO3
95.09
tosylate
CH3C6H4SO3
171.2
trifluoroacetate
CF3COO
113.0
tetrafluoroborate
BF4
86.80
tetraphenylborate
B(C6H5)4
319.2
hexafluorophosphate
PF6
145.0
259
260
Tetraethylammonium perchlorate,
[(CH3CH2)4N]ClO4, Mr = 229.7
Acid-Bromide method
Tetraethylammonium bromide, Mr = 210.2, (100 g, 0.48 mol) is
dissolved in water (100 mL) with slight warming, then 1.0 M
perchloric acid (600 mL, 0.60 mol) is added. White crystals form
immediately and are ltered off after cooling the mixture to below
5 C. The crude product is washed with ice cold 1.0 M perchloric acid
(100 mL) then recrystallised from 1.0 M perchloric acid (300 mL). The
product is ltered off, washed rst with ice cold 1.0 M perchloric acid
(100 mL), then ice cold ethanol (200 mL). Recrystallisation from
boiling ethanol (300 mL) with sufcient water to ensure complete
dissolution (about 30 mL) gives the nal product which is washed
with ice cold ethanol (200 mL). The product can be checked for purity
by dissolving about 0.5 g in warm water (2 mL) and testing the pH of
the solution, and for any reaction with silver nitrate. A further
recrystallisation from ethanol may be necessary. The product is dried
under vacuum (0.1 mm Hg), to yield 70.3 g (64%) of white needles.
The solid compound should be treated as an oxidising agent and
stored away from reducing (organic) materials.
Acid-Base method
Aqueous 1 M perchloric acid (250 mL, 0.25 mol) is added to a solution
of 1 M tetraethylammonium hydroxide (250 mL, 0.25 mol). The
mixture is adjusted to pH 7 (use a narrow range pH indicator paper,
not litmus paper) by the addition of more acid or base solution as
required, and stirred while cooling in an ice [Link] resulting
precipitate is removed from the cold suspension by suction ltration
and washed with cold water. The crude product can be recystallised
from water and dried at 100C for 24 h in vacuo. M.p. 351352.5C
with decomposition. The solid compound should be treated as an
oxidising agent and stored away from reducing (organic) materials.
The purity of the product should be checked by cyclic voltammetry.
261
WARNING
Hexauorophosphoric acid
is extremely corrosive, it
may also contain traces of
hydrouoric acid! Handle
with gloves in a fume
cupboard.
Hexauorophosphate salts
can very slowly hydrolyze
releasing hydrogen
uoride, thus they should
be stored dry, in plastic
containers.
Acid-base method
An aqueous solution of 0.5 M hexauorophosphoric acid (600 mL, 0.3
mol) is added to an aqueous 0.5 M solution of tetra-nbutylammonium hydroxide (600 mL, 0.3 mol). The mixture is
adjusted to pH 7 (use a narrow range pH indicator paper, not litmus
paper) by the addition of more acid or base solution as required. The
crude product is removed from the cooled mixture by suction
ltration and washed with water.
Recrystallisation
The crude product, produced by either the bromide or acid-base
method, is recrystallized three or four times from a 3:1 mixture of
ethanol/water and then dried for at least 24 h at 100C in a vacuum
oven. The yield is usually about 95 g.
The purity of the product should be checked by cyclic voltammetry.
262
WARNING
Fluoroboric acid is
extremely corrosive, it
may also contain traces of
hydrouoric acid! Handle
with gloves in a fume
cupboard.
Fluoroboric salts can very
slowly hydrolyze releasing
hydrogen uoride, thus
they should be stored dry,
in plastic containers.
Tetra-n-butylammonium tetrauoroborate,
[n-Bu4N]BF4, Mr = 391.5
Acid-Bromide method
Aqueous uoroboric acid (48%, 36 mL) is added to a solution of tetran-butylammonium bromide (84 g, 0.25 mol) in water (180 mL) and
the mixture stirred for 1 minute. The resulting precipitate is removed
by suction ltration and washed with water until the washings are no
longer acid (use a narrow range pH paper). The crude product can be
recystallised from ethyl acetate/cyclohexane. M.p. 162162.5C.
The purity of the product should be checked by cyclic voltammetry.
Tetra-n-butylammonium uoroborate
toluene solvate, [n-Bu4N]BF4.3(C6H5CH3)
Tetrabutylammonium uoroborate is stirred in toluene between
2225C. A two phase mixture results. The lower layer has an
approximate formula of [n-Bu4N]BF4.3(C6H5CH3). (Below 22C the
solvent-free uoroborate salt crystallises.) This layer an be separated
and used, without further purication, as the solvent for
electrohemical work. Reference: J. Chem. Soc. Chem. Commun, 323 1985.
WARNING
Triic acid is volatile and
extremely corrosive!
Handle with gloves in a
fume cupboard. Tetra-nbutylammonium triate is
hygroscopic.
Tetra-n-butylammonium triate
[n-Bu4N]CF3SO3, Mr = 391.5
Triic acid (triuoromethanesulfonic acid), Mr = 150.1, (600 mL,
0.15 mol) is slowly added, with stirring, and cooling, to a
commercially available 40% solution of tetrabutylammonium
hydroxide (Mr = 259.5) (100 mL 0.15 mol) until the pH drops to 6.5
(use a narrow range indicator paper). Water is added if necessary to
allow adequate stirring. The crude product is suspended in ice cold
water and ltered 5 times to wash it, then dried and recrystallised
from a mixture of dichloromethane and diethyl ether. Reference: J.
Org. Chem., 37, 3968, 1972.
The purity of the product should be checked by cyclic voltammetry.
263
CAUTION
Purication and
distillation of solvents
should only be undertaken
by an experienced chemist
or laboratory technician.
Incorrect procedures could
lead to explosion or re.
Appropriate care should be
exercised in the handling
and disposal of reactive
drying agents such as
metal hydrides,
phosphorous pentoxide
(P2O5), and sodium wire.
Adequate ventilation must
be ensured about the
distillation apparatus to
prevent the buildup of
ammable and toxic
solvent vapours.
Purication of solvents
For guidelines on the purication of many solvents see Purication
of Laboratory Chemicals, 4th edition, W. L. F. Armarego and D. D.
Perrin, Butterworth-Heinemann, 1997, ISBN 0750637617.
Solvents should be of at least AR (analytical reagent) grade otherwise
they may be grossly wet or otherwise need a preliminary purication
step. Further drying and purication is then usually necessary before
the solvent can be used for cyclic voltammetry or other
electroanalytical techniques.
Distillation of solvents should always take place using a short
fractionating column lled with glass rings to prevent an aerosol of
the boiling solvent being carried through the condensor. A dedicated
still for each solvent is ideal.
Ethers (including tetrahydrofuran, diethyl ether, 1,4-dioxan, and 1,2dimethoxyethane), as well as aromatic hydrocarbons (benzene,
toluene, xylenes) can be rst dried over sodium wire then distilled
from freshly drawn sodium wire with a little benzophenone added to
the distillation pot. A dark blue or purple color should develop and
persist during reux, for at least 10 minutes, which signals the
presence of sodium benzophenone ketyl (a radical anion). The ketyl
can only exist in the absence of water. The anhydrous solvent can
then be distilled. Excess sodium wire is destroyed by allowing the
distillation pot to cool and cautiously adding absolute ethanol.
Dichloromethane, 1,2-dichloroethane, cyclohexane, or hexane, can be
dried by distillation from either P2O5 or from CaH2.
Acetonitrile should be predried using a molecular sieve with a pore
size of not greater than 4 . Distillation can take place after reux
with a small quantity of P2O5 (about 0.5% w/v) to remove the
residual water. Avoid using too much P2O5 to prevent excessive
formation of an orange polymeric material.
Dimethyl sulfoxide or dimethylformamide should be predried using
a molecular sieve with a pore size of not greater than 4 , followed by
distillation at reduced pressure (10 20 mmHg).
264
Supercritical Fluids
The use of supercritical uids as solvents for cyclic voltammetry has
also been investigated. For an example of a recent paper see
Electrochemical investigations in liquid and supercritical 1,1,1,2tetrauoroethane (HFC 134a) and diuoromethane (HFC 32),
Andrew P. Abbott, Christopher A. Eardley, John C. Harper, and Eric
G. Hope, Journal of Electroanalytical Chemistry, 457, 14, 1998. In
particular HFC 134a, with tetra-n-butyl ammonium tetrauoroborate
as electrolyte, was shown to be have an extraordinarily wide redox
stability window of 9 volts.
265
266
A P P E N D I X
Potentiostat Designs
Potentiostats are designed to maintain a known potential difference
across a pair of electrodes while measuring the resulting current ow.
While this sounds simple in theory, the practice of electrochemistry
has demanded a variety of designs to cope with different types of
experiment.
267
nitric oxide meters, which are very similar to oxygen meters, but
which reduce NO.
The common feature amongst all these devices is that they are used
for experiments in which the current owing through the (relatively
large) reference electrode is usually measured in nanoamperes or less.
These tiny currents are not sufcient to cause enough electrolysis to
seriously disrupt the environment around the reference electrode.
Some of these potentiostats will also have an external input so that
they can except an external voltage signal to alter the electrode
potential.
268
Compliance voltage
For most experiments involving such a potentiostat, at any given
instant the potential between the working and reference electrodes is
being held at a predetermined value while current ow is measured
across the working and auxiliary electrodes. These are the current and
potential values that are actually plotted.
But to do this some other potential must be maintained between the
auxiliary and working electrodes. This potential is called the
compliance voltage and, depending on the internal resistance of the
cell (which in turn depends on type of solvent, total electrolyte
concentration, distance between the electrodes, porosity and size of
frits used to separate cell compartments, etc.) may be much greater
than the observed potential of the working electrode. During an
experiment it may happen that the potentiostat is unable to provide a
sufciently large voltage across the auxiliary and working electrodes
to achieve the desired potential across the reference and working
electrodes. In this situation the potentiostat is said to be out of
compliance (or overloaded) and the results from such an experiment
will be meaningless in the non-compliance region. The
ADInstruments Potentiostat has a non-compliance light on its front
panel which will illuminate if this occurs.
High compliance
potentiostats are an
electrical shock hazard
unless used strictly in
accordance with the
correct procedure. Read
the manufacturers
manual!
269
It may also occur that the current owing between the auxiliary and
working electrodes is greater than the potentiostat is capable of
delivering and/or measuring. This is a current overload condition.
Currents can be decreased by using electrodes with a smaller surface
area, using lower concentrations of analyte, or (for stripping
methods) using a shorter deposition period. If EChem is being used
with an ADinstruments Potentiostat and the current capability of the
potentiostat (100 mA) is exceeded then an overload message appears
in the Cursor Panel.
By connecting the reference and auxiliary electrode leads together
most three electrode potentiostats can also be used as a two electrode
system. Check with the potentiostat manufacturer if you are unsure
whether your instrument can be used the way. The ADinstruments
Potentiostat can be used in this way
Many manufacturers make three electrode potentiostats such as
EG&G PAR, BAS, Radiometer, Solartron, AMEL, Metrohm, HEKA,
Cypress, Sycopel, and ADInstruments.
270
271
272
Bibliography
Electrochemistry is a large eld and there are many specialised and
general texts available, as well as journals and on line information.
The following list is meant as only as a general introduction to the
literature.
The Internet
Much useful information can be obtained from various internet web
sites such as:
273
Text Books
For an extensive listing of text books, from 1950 to present, consult
the Electrochemical Science and Technology Information Resource
(ESTIR) web site at [Link]
Many other monographs and proceedings are available from the
Electrochemical Society.
Surface chemistry and electrochemistry of membranes. T. S.
Sorensen (Ed). Dekker, NY 1999.
Pocket handbook of electroanalytical instrumental techniques for
analytical chemistry. J. Osteryoung, Prentice Hall, Englewood Cliffs,
NJ 1998.
Biosensors: An Introduction. Brian R. Eggins. Wiley, 1998.
Environmental electrochemistry: fundamentals and applications in
pollution abatement. K. Rajeshwar and J.G. Ibanez. Academic, NY
1997.
Green functions in electrochemistry. S. Romanowski and L.
Wojtczak (Ed). Kluwer, Dordrecht, Netherlands 1997.
Modern Techniques in Electroanalysis. P. Vanysek (Ed), Wiley, NY
1996.
Laboratory techniques in electroanalytical chemistry (2nd edition).
P.T. Kissinger and W.R. Heineman (Ed), Dekker, NY 1996.
Experimental Techniques in Bioelectrochemistry. V. Brabec, D. Walz
and G. Milazzo (Ed.), Birkhauser, Basel 1996.
Reference electrodes, theory and practice. Reprint of the original
1961 edition - see below. D.J.G. Ives and G.J. Janz (Ed), NACE
International, Houston, TX 1996.
Electrochemistry for Chemists (2nd edition). D.T. Sawyer, A.
Sobkowiak, and J.L. Roberts, Wiley, New York, 1995.
274
Bibliography
275
276
Bibliography
277
278
Journals
Bioelectrochemistry and Bioenergetics. Elsevier.
[Link]
Biosensors and Bioelectronics, Elsevier.
[Link]
Electroanalysis, WileyVCH.
[Link]
Electrochimica Acta. Elsevier.
[Link]
Interface. The Electrochemistry Society.
[Link]
Journal of Applied Electrochemistry. Kluwer.
[Link]
Journal of Electroanalytical Chemistry. Elsevier.
[Link]
Journal of Electroanalytical Chemistry and Interfacial
Electrochemistry. Elsevier.
[Link]
Journal of Solid State Electrochemistry. Springer-Verlag.
[Link]
Journal of The Electrochemical Society.
[Link]
Journal of the Electrochemical Society of Japan, Overseas Edition (in
English).
Russian Journal of Electrochemistry. Kluwer/Plenum.
[Link]
Bibliography
279
280
Glossary
amperometric titrimetry. A titration
technique where a constant potential is held
at the working electrode and the resulting
current measured during a titration.
281
282
Glossary
283
284
Index
compatibility 5
applied potential control 30, 34
Apply Technique 159
Auto Save Data 91
Automatic temperature compensation 196
recording temperature 196
automating EChem 94
auxiliary electrode 269
axes 16
A
About EChem command 20, 227
About This Computer dialog box 228
AC cyclic voltammetry 109
AC Voltammetry 109, 163
active page 44
Add 62
Add Macro to Menu dialog box 95
Add to Data Pad command 57
adding data to the Data Pad 57
ADInstruments Potentiostat 31
applied potential control 30, 34
cell controls 33
dialog box 31
dummy mode 34
ltering 33
real mode 34
settings 31
setting the current range 33
standby mode 34
AMEL 220
amperometric titrimetry 180, 281
amperometry 281
Amplitude axis 17, 48
analysis 11, 37
analysis mode 12
analyte 281
anion 281
Anodic Stripping Voltammetry 135
appending data les 77
Apple menu
About EChem command 20, 227
AppleScript 106
application
B
background
buttons 43
page 54
recording 19, 20
subtraction 54
Baker square wave voltammetry 121
BAS 211
C2 Cell Stand 167
Low Current Module 167
baseline 51, 73
non-linear 54
Begin Repeat 105
biosensors 182
bipolar display 40, 41
C
Cathodic Stripping Voltammetry 137
Cell button 56
Cell Control 33
channel separator 18, 39, 48
checkboxes 12
Chronoamperometry 167
and Chart 167
285
286
Sample 19
Control Panels 90
control panels 16
hiding 90
moving 91
position 90
controlled current electrolysis 179
controlled potential electrolysis 178
Controls command 90
Copy command 68
Copy Special 76
command 70
Copy to Cliboard dialog box 70
copying data
as picture 70
as text 70
corrosion 201
corrosion techniques 114
Cottrell equation 170, 173, 252
counter electrode 269
crashes 236
current
axis 17
overload 270
range 17
range adjustment 25
scale 17
current sampling
in Differential Pulse Voltammetry 130
in Square Wave Voltammetry 121
Linear Sweep Voltammetry 116
Normal & Reverse Pulse Voltammetry 126
Square Wave Voltammetry technique 121
Cursor panel 18
curve tting 170
customer comment 229
customising EChem 11, 87
Cut command 68
cycles
in Cyclic Voltammetry 144
Cyclic Potentiodynamic Polarization 203
Cyclic Square Wave Voltammetry 146
Cyclic Voltammetry 140
cleaning potential 144
cleaning time 144
common organic solvents 255
deposition potential 143
deposition time 143
dialog box 141
Fast (using Chart and Scope) 164
D
data compression 21
data display area 18, 38
data le 75
data loss 233
Data Pad 5559
adding data 57
functions 58
limits 55
printing 59
setting up 57
Data Pad command 55
Data Pad Miniwindow 59
data resolution 49
Data Selection dialog box 122
dealer and distributor information 228
default settings 13
Delete Macro command 96
Delete Macros dialog box 97
deposition potential
in Cyclic Voltammetry 143
in Stripping Voltammetry 138
deposition time
in Cyclic Voltammetry 143
in Stripping Voltammetry 138
dialog box placement 232
Differential Pulse Voltammetry 130
current sampling 130
dialog box 131
nal potential 132
initial potential 132
Index
E
E vs I 38
EChem desktop icons 12
EChem Options 91
Edit menu 224
Clear command 68
Copy command 68
Copy Special command 70
287
Cut command 68
Paste command 68
Show Clipboard command 71
Undo command 69
editing data 68
EG&G PARC product compatibility 206
electric shock 269
Electrochemical Noise 200
electrode
auxiliary (AE) 269
counter (CE) 269
for organic solvents 259
hanging mercury drop (HMDE) 135, 160
mercury drop (MDE) 135
mercury lm (MFE) 135
potentiometric redox 184
reference (RE) 268
rotating ring disk (RRDE) 180
working (WE) 268
electrode response 194
electrosynthesis 178
emergency access 92
Emergency Access dialog box 93
End Repeat command 106
F
Faraday cage 167, 238
Faraday's constant 252
Fast Cyclic Voltammetry 164
Fast Scan Techniques 163
faster printing 81, 234
le limits 20
File menu 223
Close command 14
New command 12
Open command 12, 77
Page Setup command 80
Print command 79
Quit command 14
Save As command 69, 74
Save command 74
le types
data 75
macro 77
settings 75
text 75
nal potential
in Cyclic Voltammetry 142
in Differential Pulse Voltammetry 132
in Linear Sweep Voltammetry 118
288
G
Galvanic Cells 199
galvanostat 175
gas & stirrer controls 138
Go To Page command 16, 45
Graticule buttons 43
H
half wave potential 251
hanging mercury drop electrode (HMDE) 135, 160
HEKA product compatibility 217
high-resolution printing 49, 81
I
i vs E display mode 38, 68
I vs t display mode 38
icons 12
iE vs t display mode 38, 68
initial potential
in Differential Pulse Voltammetry 132
in Cyclic Voltammetry 142
in Multi Pulse 147, 155
in Linear Sweep Voltammetry 118
in Normal & Reverse Pulse Voltammetry 127
in Square Wave Voltammetry 123
Input Amplier
controls 26
dialog box 27
button 17, 26
installing EChem 6
Integrate 63
Integrated Cottrell equation 253
internet 273
interruptions while recording 20
Invert 62
Invert Axis 41
ion selective electrodes 183
Calibration 189
isopotential point 197
J
journals 279
Command-key equivalents 95
commands 101
deleting 96
keeping records 94
loading 94
nesting 97
opening les 99
playing 96
problems 235
recording 95
sampling 98
saving 94
saving les 100
stopping 96
Main EChem Window 14, 38
manual temperature compensation 194
Marker 18, 48, 50, 72
independent 51, 72
lair 50
locked to waveform 51, 72
Miniwindow 52
Marker command 52
measurement
direct 71
relative 50, 72
memory 20
allocation 20
problems 233
requirements for EChem 3
memory indicator bar 21
menus 223
altering 88
hiding 89
locking 89
Menus command 88
dialog box 88
mercury drop electrode (MDE) 135
mercury lm electrode (MFE) 135
Message command 103
Metrohm product compatibility 215
Miniwindow 52, 59
Multi Pulse technique 146
dening pulses 149, 156
dialog box 147
nal potential 147
initial potential 147, 155
pulse duration 151, 157
pulse height 150, 156
pulse increment 150, 157
pulse start time 149, 156
K
Keep Partial Data 20, 91
keyboard shortcuts 16, 44, 226
L
Line Type buttons 43
Linear Sweep Voltammetry 116
current sampling 116
dialog box 117
nal potential 118
initial potential 118
quick reference 242
rest time 117, 119, 123, 132, 141, 147
scan rate 118
setting parameters 117
step height 119
step width 119
View button 119
Waveform Overview dialog box 119
waveform terminology 116
liquid chromatography 181
low current experiments 166
lower potential limit
in Cyclic Voltammetry 142
M
Macintosh 104
macro commands 101
AppleScript... command106
Begin Repeat command 105
Delete Macro command 96
End Repeat command 106
Message command 103
Message dialog box 104, 105
Open dialog box 99
Play Sound command 102
Play Sound dialog box 103
Repeat for Each Page command 105
Save As dialog box 100
Speak Message command 104
Start Recording command 95
Update Screen command 101
Wait command 101
Wait dialog box 102
macro le 77
Macro menu 225
macros 94
called by other macros 97
changing dialog box settings 98
Index
289
N
navigating 16, 44
Nernst equation 184, 192
Nernstian response 185, 195
New command 12
noise 237
non-linear baseline 54
Normal & Reverse Pulse Voltammetry 126
current sampling 126
dialog box 127
nal potential 127
initial potential 127
pulse width 128
quick reference 244
rest time 128
sampling period 129
scan rate 127
setting parameters 126
step height 128
step width 128
View button 129
Waveform Overview dialog box 129
waveform terminology 126
Notebook 64
printing 65, 84
Notebook command 64
O
off-screen buffer 21, 233
Open dialog box 78
Open directory dialog box 13
opening a EChem le 12
Open command 12, 77
organic solvents 255
Osteryoung square wave voltammetry 121
out of compliance 269
290
P
Page buttons 16, 44, 46, 54
pop-up menu 46
Page Comment 65
button 18, 49, 65
window 65
page comments 65
editing 65
printing 66
Page Corner controls 16, 44
page denition 16, 44
Page Layout dialog box 84
page limit 20
Page Setup command 80
dialog box 80
Parry-Osteryoung equation 251
Paste command 68
pasting in text 79
Pause button 28
pH Amp 182
pH electrode 182
calibration 189
isopotential point 197
pH extension 189
Picostat 166
PINE product compatibility 214
Play Sound command 102
pointer 19
arrow-headed cross 91
cross 72
double-headed arrow 72
dragging 42
heavy cross 56
I-beam 19, 56
resizing 57
stretching 42
Polarity 34
polarization resistance 203
Polarographic Techniques 140, 160
polarography 109
potential axis 17, 42
EChem Users Guide
potential limits
in Cyclic Voltammetry 140
potential monitoring 25
potentiodynamic polarization 202
potentiometric
redox electrode 184
sensors 182
potentiostat
current output 25
potential output 25
Potentiostat, see ADInstruments Potentiostat
Potentiostat dialog box 31, 32
potentiostats
third party input range adjustment 25
PowerChrom software 5
PowerLab
e and S models 5
digital (TTL) outputs 139, 160
PowerLab Unavailable dialog box 7
Preferences 88
submenu 88, 224
Controls command 90
Menus command 88
Options command 91
Start-Up command 92
Print
Current Page Only checkbox 83, 234
Sweep Description 83
Printers 3, 4
printing 79
colour 82
Data Pad 59
EChem pages per sheet 81
faster 81
high-resolution 49, 81
Notebook 65
page comments 66
problems 234
Zoom window 49
Print command 79
problems and solutions 229
Progress Indicator display 21
pulse amplitude
in Differential Pulse Voltammetry 133
pulse height
denition 114
Pulse Techniques 114
pulse terminology 114
pulse width
denition 114
Index
Q
Quartz Crystal Microbalance 200
Quit command 14
quitting EChem 8, 14
R
radio buttons 12
Radiometer product compatibility 216
RAM memory requirements 3, 4
ramp
digitally generated 110
staircase 110, 116, 121
Randles-Sevcik Equation 249
range 28
Range pop-up menu 17, 28
in Cyclic Voltammetry 141
in Differential Pulse Voltammetry 132
in Multi Pulse techniques 155
in Square Wave Voltammetry 123
Read Text Options dialog box 79
real mode 32
Reciprocal 63
recording 19
display during 20
delity 15, 49
length 20
memory 20
problems 233
reference electrode 268
Repeat for Each Page command 105
rest time 115
in Cyclic Voltammetry 143
in Differential Pulse Voltammetry 134
in Linear Sweep Voltammetry 117, 119, 123,
132, 141, 147
in Multi Pulse 148, 149, 155
in Normal & Reverse Pulse Voltammetry 128
in Square Wave Voltammetry 125
Reverse Polarity 34
Reverse Pulse Voltammetry 126
rotating ring disk electrode 180
Row button 56
S
Sample panel 19
Sampling dialog box 32
291
292
square 63
square wave amplitude
in Square Wave Voltammetry 124
Square Wave Voltammetry 121
current sampling 121
dialog box 123
nal potential 123
frequency 123
initial potential 123
quick reference 243
range pop-up menu 123
rest time 125
sampling period 124
setting parameters 122
square wave amplitude 124
step height 124
View button 125
Waveform Overview dialog box 125
waveform terminology 121
staircase ramp 110, 116, 121
Standby mode 34
Start button 19
Start Recording command 95
Start-up problems 229
Start-Up command 92
Settings dialog box 92
statistics 58
step height
denition 110
in Cyclic Voltammetry 143
in Differential Pulse Voltammetry 132
in Linear Sweep Voltammetry 119
in Multi Pulse 148, 155
in Normal & Reverse Pulse Voltammetry 128
in Square Wave Voltammetry 124
step width
denition 110
in Cyclic Voltammetry 143
in Differential Pulse Voltammetry 133
in Linear Sweep Voltammetry 119
in Multi Pulse 148, 155
in Normal & Reverse Pulse Voltammetry 128
stirrer & gas controls 138
Stripping Voltammetry 135
clean time potential 140
cleaning time 138
deposition potential 138
deposition time 138
setting parameters 137
stirrer & gas controls 138
Subtract 62
Subtract Background command 55
system conguration information 228
T
technical support 227
technique description 17
Technique menu 224
techniques 11
AC voltammetry 163
additional to EChem 162
anodic stripping voltammetry 135
cathodic stripping voltammetry 137
chronoamperometry 167
chronocoulometry 173
chronopotentiometry 175
controlled Potential Electrolysis 178
corrosion 114
cyclic potentiodynamic polarization 203
Cyclic Voltammetry 140
Differential Pulse Voltammetry 130
electrosynthesis 178
Linear Sweep Voltammetry 116
list of, 108
low current experiments 166
Multi Pulse 146
Normal & Reverse Pulse Voltammetry 126
polarization resistance 203
potentiodynamic polarization 202
Square Wave Voltammetry 121
stripping voltammetry 135
temperature compensation
automatic 196
manual 194
Text Books 274
text le 75
pasting in from Scope 79
reading 78
third party equipment
BAS 211
EG&G PARC 206
HEKA 217
Metrohm 215
PINE 214
Radiometer 216
Schlumberger 216
third party potentiostats
adjusting the input range 25
applying units conversion 29
performing Cyclic Voltammetry 145
Index
U
Undo command 69
Units Conversion 29, 40, 41, 232
dialog box 29, 32
Update Screen command 101
upper potential limit
in Cyclic Voltammetry 142
using this guide 2
V
View button
in Differential Pulse Voltammetry 134
in Cyclic Voltammetry 144
in Linear Sweep Voltammetry 119
in Normal & Reverse Pulse Voltammetry 129
in Square Wave Voltammetry 125
voltammetric ramp 110
voltammetry 109
AC 109, 163
anodic stripping 135
Baker square wave 121
cathodic Ssripping 137
Cyclic 140
Differential Pulse 130
Fast Cyclic 164
Linear Sweep 116
Normal & Reverse Pulse 126
Osteryoung square wave 121
Square Wave 121
stripping 135
W
Wait command 101
Waveform Cursor 71, 72, 73
waveform cursor display 18
Waveform Overview dialog box
in Cyclic Voltammetry 145
in Linear Sweep Voltammetry 119
in Normal & Reverse Pulse Voltammetry 129
293
XYZ
zero reference point 50, 72
zoom box 16, 55
Zoom window 47, 69
Zoom Window command 47
294
Extent
This Agreement is between ADInstruments Pty
Ltd [ADI] and the purchaser [the Purchaser] of
any ADI product software, hardware, or both
and covers all obligations and liabilities on the
part of ADI, the Purchaser, and other users of the
product. The Purchaser (or any user) accepts the
terms of this Agreement by using the product. Any
changes to this Agreement must be recorded in
writing and have ADIs and the Purchasers
consent.
Limitations
Since ADI products could be affected by external
factors (for instance, the computer system on
which they run), absolute performance and
reliability cannot be guaranteed. No warranty,
either express or implied or statutory, other than
that contained in this Agreement, is made in
respect to ADI products. The Purchaser therefore
assumes all risks as to the performance and
reliability of the products, and the results gained
using them.
Responsibilities
The Purchaser and any others using any ADI
product agree to use it in a sensible manner for
purposes for which it is suited, and agree to take
responsibility for their actions and the results of
their actions.
295
Hardware Warranty
Technical Support
Jurisdiction
This Agreement shall be governed by the laws of
New South Wales in Australia, and any
proceedings concerning it shall be heard and
resolved by the Supreme Court of New South
Wales in Australia.
Software License
The Purchaser has the non-exclusive right to use
the supplied ADI software. (The Purchasers
employees or students, for instance, are entitled to
use it, provided they adhere to this Agreement.)
The Purchaser can make as many backup copies of
ADI software as is reasonable. Each separate
purchase of a software program, however, licenses
it to be used on only one computer at any given
time. Although multiple copies of a purchased
program may exist, two or more copies must not
be used simultaneously. Site licenses (multipleuser licenses) are treated as if ve copies of a
program were purchased separately, even if only
one set of disks is provided.
296