Thiruvalluvar University Master of Science M.Sc. Applied Microbiology (With Effect From 2020 - 2021)
Thiruvalluvar University Master of Science M.Sc. Applied Microbiology (With Effect From 2020 - 2021)
MASTER OF SCIENCE
M.Sc. Applied Microbiology
(With effect from 2020 – 2021)
The Course of Study and the Scheme of Examination
@ Compulsory Courses don’t change this category. Number of core papers & Practical may be changed
Study Components ins. Maximum Marks
Sl.
hrs / Credit Title of the Paper
No. Course Title week Uni.
CIA Total
SEMESTER I Exam
General Microbiology and Microbial
1 Paper-1 5 4 25 75 100
Physiology
2 Core Paper-2 5 4 Immunology and Immunotechnology 25 75 100
3 Paper-3 4 4 Food and Dairy Microbiology 25 75 100
4 Practical-1 10 5 Lab Course - 1 50 150 200
Internal Elective for same major students (Choose any one)
Paper-1 A. Computational Biology
Core
5 3 3 B. Algal Technology 25 75 100
Elective
C. Biosafety
External Elective from other major departments (Inter/multi disciplinary papers)
6 Open Paper-1 3 3 A.Microscopic Techniques 25 75 100
Elective B. Basics of Microbiology
C. Molecular Biology
30 23 175 525 700
Uni.
SEMESTER II CIA Total
Exam
7 Paper-4 5 4 Medical Bacteriology and Mycology 25 75 100
8 Paper-5 5 4 Industrial Microbiology 25 75 100
Core 4 Molecular Biology and Microbial
9 Paper-6 4 25 75 100
Genetics
10 Practical-2 8 5 Lab Course - 2 50 150 200
Internal Elective for same major students (Choose any one)
Paper-2 A. Mushroom cultivation
Core
11 3 3 B. Biofertilizer Technology 25 75 100
Elective
C. Intellectual Property Rights
External Elective for other major departments (Inter/multi disciplinary papers)
12 Open Paper-2 3 3 A. Food Processing Technology
Elective B. Infectious Diseases and its Control 25 75 100
C. Microbial Ecology
13 *Field Study - - 2 - 100 - 100
14 Compulsory Paper 2 2 Human Rights & Duties 25 75 100
30 27 300 600 900
1
* Field Study
There will be field study which is compulsory in the first semester of all PG courses with 2 credits. This
field study should be related to the subject concerned with social impact. Field and Topic should be
registered by the students in the first semester of their study along with the name of a mentor before the
end of the month of August. The report with problem identification and proposed solution should be
written in not less than 25 pages in a standard format and it should be submitted at the end of second
semester. The period for undergoing the field study is 30 hours beyond the instructional hours of the
respective programme. Students shall consult their mentors within campus and experts outside the
campus for selecting the field and topic of the field study. The following members may be nominated for
confirming the topic and evaluating the field study report.
2
THIRUVALLUVAR UNIVERSITY
MASTER OF SCIENCE
M.Sc. Applied Microbiology
(With effect from 2020 – 2021)
SEMESTER I
CORE PAPER – 1
GENERAL MICROBIOLOGY AND MICROBIAL PHYSIOLOGY
UNIT-II - Sterilization (Heat, Filtration) and Disinfection methods and their quality control. -
sporulation and its mechanics - growth and nutrition - Nutritional requirements - Autotrophs,
heterotrophs - enrichment culture - growth curve - Kinetics of Growth - Mathematical
expression of exponential growth phase; Measurement of growth and growth yields - Batch
Culture - Synchronous growth - Techniques of pure culture.
Text Books
1. Pelczar & Kreig (2006). Microbiology5th edition. Tata McGraw Hill, New Delhi.
2. Dubey RC and Maheswari DK (2005). A text book of Microbiology, Revised Multicolour
edition, S.Chand Publishers, New Delhi.
3. Prescott, L. M., J. P. Harely and D. A. Klain, Microbiology, 2003 (5th Edition) McGraw Hill,
New York.
Reference Books
3
1. Salle, AJ (2001). Fundamentals & Principles of Bacteriology. 7th edition. Tata McGraw-Hill,
Davis.
2. Atlas R. A. Principles of Microbiology (2nd Edition), 1997. Wm. C. Brown Publishers,
Iowa.
3. Elizabeth Moore-Landecker. (1996). Fundamentals of the fungi. (4th edition). Prentice Hall
International, Inc, London.
4. Conrat HF, Kimball PC and Levy JA. (1988). Virology. II edition. Prentice Hall, Englewood
Cliff, New Jersey.
5. Delbecco, Eisen & Ginsburg (1990) Microbiology 5th Edition Harper & raw, New York
4
SEMESTER I
CORE PAPER – 2
Course Objectives
1. To procure knowledge on the basic principles and definitions of immunology, its modern
achievements and practical ways of implementation.
2. To impart knowledge about the underlying concepts of molecular and cellular mechanisms
involved in the development and regulation of the immune response.
3. To learn the important concepts in Major histocompatibility and Hypersensitivity Reactions
4. To understand about autoimmune diseases and the principles behind immunomodulation.
5. To acquire skills and competence in specialized immunological techniques in the diagnosis
and management of health related disorders and about tumor immunology.
5
Text Books
1. Roitt I., Essential Immunology, 13 th edition, Blackwell Scientific Publications, 2017.
2. William E. Paul. Fundamental Immunology, Lippincott Williams and Wilkins; 7th edition,
2012.
3. Anathanarayanan and Paniker, Text Book of Microbiology, 8th edition, Orient and Longman,
New Delhi, 2009.
Reference Books
1. Kuby, Judy Owen, Jenni Punt, Sharon Stanford., Immunology, WH Freeman Publishers,7th
Edition 2012.
2. Weir DM and Stewart, J.,Immunology, 10th Edn., Churchill Livingston, New York, 2000.
3. Tizard, Ian R., Immunology- An Introduction, 4th edition, Saunders College Publishing, New
Delhi.
4. Sunil Kumar Mohanty, K Sai Leela., Textbook of Immunology, 2nd Edition, Jaypee Brothers
Medical Publishers, 2014.
5. Mark Peakman and DiegoVergani. 1st magazine, 1997, Basic and Clinical Immunology.
Churchill Livingstone, New York.
6
SEMESTER I
CORE PAPER – 3
Text Books
1. Frazier W. C. and D.C. Westhoff, Food Microbiology, 1988 (4lh Edition), Tata McGraw Hill
Publishing Company Ltd.., New Delhi.
2. Moss. M. R., and M. O. Moss, Food Microbiology, 1996. New Age International (P) Limited
Publishers, New Delhi.
3. J.B. Prajapati. 1995. Fundamentals of Dairy Microbiology. Akta Prakashan Publisher.
Reference Books
1. Banwart, G. J. Basic Food Microbiology, 1989, CBS Publishers and Distributors, New Delhi.
2. Jay, J. M., Modern Food Microbiology. (4lh Edition), 1996, CBS Publishers and Distributors.
3. Milk and Milk Products. Eckles C.H., Combs W.B. and Macy H. 1998. Published by Tata
Mcgraw Hill Publishing Co Ltd.
4. Narayanan, R. and B. Dhanalakshmi. 2013. Food Microbiology: Basic and Applied With
Laboratory Exercises. NIPA Publishers.
5. A. Bohra and Pradeep Parihar. 2006. Food Microbiology. Agrobios, Jodhpur.
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Internal Elective for same major students
Semester I A. Computational Biology
Unit II: Data-alignment and applications; Collecting and Storing Sequence Data; Sequence
assembly; Submission of Sequences; Sequence accuracy; Sequence databases; Sequence
formats; Conversion between formats; Scoring matrices; Homology and related concepts; Dot
Matrix methods; Dynamic programming methods for global and local alignments tools- BLAST.
Unit III: Nucleic acid sequence analysis: Reading frames; Codon Usage analysis; Translational
and transcriptional signals; Splice site identification; Gene prediction methods; RNA fold
analysis.
Unit IV: Basic structure and building blocks of proteins; motifs of protein structures; alpha/beta
structures; Folding and flexibility, Prediction, engineering and design of protein structures;
Methods to identify secondary structural elements.
Unit V: DNA microarray: database and basic tools, Gene Expression Omnibus (GEO),
ArrayExpress, SAGE databases; understanding of microarray data, normalizing microarray data,
detecting differential gene expression, correlation of gene expression data to biological process
and computational analysis tools. Protein arrays: basic principles, bioinformatics-based tools
for analysis of proteomics data (Tools available at ExPASy Proteomics server); databases (such
as InterPro) and analysis tools; Protein-protein interactions.
Text Books
1. An introduction to bioinformatics algorithms by Neil C. Jones, Pavel Pevzner. MIT Press.
2004.
2. Bioinformatics: Sequence and Genome Analysis by Mount D., 2004 Cold Spring Harbor
Laboratory Press, New York.
Reference Books
1. Bioinformatics- a practical guide to the analysis of Genes and Proteins by Baxevanis, A.D.
and Francis Ouellellette, B.F., 1998, John Wiley & Sons, UK.
2. Bioinformatics: the machine learning approach by Pierre Baldi, Søren Brunak. MIT Press.
2001.
3. Cynthia Gibas and Per Jambek. Developing Bioinformatics computer skills, Shroff publishers
and Distributors Pvt. Ltd., O’ reilly, Madurai. 2001.
8
Semester I B. Algal Technology
Unit II: Characteristics, significance and Uses of the following algae - Dunaliella,
Haematococcus, Chlorella, Scenedesmus, Botryococcus, Porphyridium, Gracilaria, Gelidium,
Gelidiella, Laminaria, Porphyra, and Ulva.
Unit III: Algal production systems; Strain selection; Algal growth curve; Culture media; indoor
cultivation methods and scaling up; Measurement of algal growth; Large-scale cultivation of
algae; Harvesting algae. Drying; Algal immobilization and its applications
Unit IV: Algae as a source of food and feed; Algae as SCP - Spirulina mass cultivation and its
applications, Algae as a source of pigments, fine chemicals and bio-fertilizers; Blue-green algal
bio-fertilizer - Method of preparation, application and its advantages over inorganic fertilizers;
Liquid seaweed fertilizer - Method of preparation and application. Biodiesel from algae;
Phycoremediation; Role of algae in nanobiotechnology.
Text Books
1. TRIVEDI, P.C. 2001 Algal Biotechnology. Pointer publishers, Jaipur, India.
2. BARSANTI, LAURA AND PAOLO GUALTIERI 2005 Algae-Anatomy, Biochemistry and
Biotechnology. Taylor & Francis, London, New York.
Reference Books
1. Borowitzka MA and Borowitzka LJ. Microalgal Biotechnology, Cambridge University Press.
1989.
2. BECKER, E.W. 1994 Microalgae-Biotechnology and microbiology. Cambridge University
Press.
3. Das Mihir Kumar. Algal Biotechology. Daya Publishing House.
9
Semester I C. Biosafety
Unit II: Biohazards: Definition of GMOs & LMOs; rDNA technology - GMO applications in
food and agriculture - Environmental release of GMOs - Risk - Analysis, Assessment,
management and communication - Hazardous Wastes in Biological Labs – Types and
Management - Bioterrorism
Unit III: Biocontainment: Concepts and Strategies – Risk Groups (from NIH Guidelines) and
Biosafety Levels (from CDC Biosafety) - Biological Safety Cabinets - Primary Containment for
Biohazards - Animal Biosafety and Facilities - Operations and Maintenance of Biosafety
Facilities.
Unit IV: Biosafety Management: Risk Assessment - Risk Communication - Warning Signs and
Labels - Working Safely with Biohazardous Agents - Disinfection and Decontamination
procedures - Emergency Planning and Response - Personal Protective Equipment.
Text Books
1. Jonathan, Y.R., Anthology of Biosafety (Vols. 1-4), American Biological Safety Association
(2005).
2. Sateesh, M.K., Bioethics and Biosafety, IK International Publishers (2008)
Reference Books
1. Biosafety and bioethics (2006) Rajmohan Joshi. Gyan Publishing House.
2. Microbial Biotechnology & Biosafety Aspects P. Palanivelu. Twentyfirst Century
Publications. 2016
3. Biological Safety: Principles and Practices. American Society for Microbiology. 2017.
Editors: Dawn P. Wooley and Karen B. Byers.
10
External Elective for other major departments (Inter/multi disciplinary papers)
UNIT –II: Light Microscope, Bright field Microscope, Dark field Microscopy; Slide preparation
- Fixation -Staining of sample Technique - Mounting of sample - Labelling and storage of slides
- Application in biological science.
UNIT-IV: Electron Microscopy - Electron beam Principle - Construction and working of TEM
(Transmission of Electron Microscope), SEM (Scanning Electron Microscope) with their merits
limitations and their Application.
UNIT- V: Atomic Microscopy working of AFM (Atomic Force Microscope) and STM
(Scanning Tunnelling Microscope) with their merits limitations and their Applications. Confocal
Microscope techniques.
Text Books
1. Murphy, Douglas and Davidson, Michael - Fundamental of light Microscopy and electronic
imaging, second edition.Wiley-Blackwell. 2013.
2. Cruycox, optical imaging Techinques in Cell Biology. CRC press. 2007.
Reference Books
1. Paurley,J.B.(ed).Handbook of Biological Confocal Microscopy, Second edition.1995
Newyork Plemum Press.
2. Jmwalls, Editor, method of surface analysis: Techniques and application. Cambridge
University Press 1990
3. Fundamentals of Light Microscopy and Electronic Imaging. Ed. by Douglas B. Murphy and
Michael W. Davidson. 2001. Wiley and Blackwell.
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SEMESTER I B. Basics of Microbiology
UNIT – II: Microscopy – Microscopes - principles and applications – Bright field, Dark field,
Fluorescent, Phase contrast & Electron Microscope (TEM and SEM); Morphology of Bacteria –
size, shape and arrangement; Structure and function of bacterial cell organelles; Stains and
staining techniques – simple, Grams, acid fast and special staining – flagella, capsule,
metachromatic granules.
UNIT – III: Algae - Structure and classification (outline only); Specific examples – Microalgae,
Cyanobacteria; Cultivation of algae; Algal toxins; Uses and significance of algae. Fungi –
General characteristics, morphology and reproduction; Classification (outline only); Culturing
fungi; Fungal diseases; Industrial uses of Fungi.
Text Books
1. Pelczar J.R., Chan E.C.S., and Krieg R., Microbiology, 5 th Edition, Tata McGraw – Hill
publish company limited, Delhi, 2004.
2. Rajan. S and Selvi Christy (2015). Essentials of Microbiology, Anjanna Book House
Publishers, Chennai.
Reference Books
1. Prescott, L. M., J. P. Harely and D. A. Klain, Microbiology, 2003 (5th Edition) McGraw Hill,
New York.
2. Atlas R. A. Principles of Microbiology (2nd Edition), 1997. Wm. C. Brown Publishers, Iowa.
3. Heritage,J. Evans E.G.V. and Killington, R.A. (1996). Introductory Microbiology. Cambridge
University Press.
12
SEMESTER I C. Molecular Biology
Unit I: Central Dogma – Concept of genes - Nucleic Acids – Components of Nucleic acids –
The double helix – Circular and superhelical DNA – Determination of the base sequence of
DNA
Unit II: Structure of RNA – Methods used to study macromolecules – Isolation of nucleic acids
- Proteins - Chemical and Physical structure of a polypeptide chain
Unit III: DNA replication – the basic rule for replication of all nucleic acids – Discontinuous
replication – Bidirectional replication – Rolling circle replication – DNA damage and repair –
Mutations and Mutants –– Mutagenesis – Reversion – Suppression
Unit IV: Plasmids - Types – properties of particular bacterial plasmids - Transposable elements
– Transposons and evolution - Molecular aspects of gene expression – Transcription – messenger
RNA – Translation – the genetic code – the operon model
Text Books
1. Friefelder D. (1995). Molecular Biology, 2nd Edn. Narosa Publishing House.
2. Weaver. R. F. Molecular Biology. 3rd ed. Mc Graw Hill publilcation , 2005.
Reference Books
1. Russel Peter. Essential Genetics. 2nd Edn, Blackwell Science Pub.
2. Alberts Bruce (2008) Molecular Biology of Cell, 5th Ed. Garland Pub.
3. Watson. J. D, Baker. T. A, Bell. S. P, Gann. A, Levine. M, Losick. R. Molecular Biology of
Gene. 5th The Benjamin / Cummings Pub. Co. Inc, 2003
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SEMESTER – I Lab course - 1
General Microbiology
Principles and methods of sterilization – Autoclave, Hot air oven
Direct microscopic observations of yeast budding
Staining methods - Simple, Gram staining, Negative, spore, Capsule staining
Preparation of Culture Media - Broth, Agar, plates, slants, soft agar
Pure culture techniques - Streak plate
Measurement of size of microbes – micrometry
Motility determination – Hanging drop method
Total count - Haemocytometer
Microscopic observation of fungi - Lactophenol cotton blue staining
Biochemical tests for bacterial identification
Immunology
Quantification of Blood cells using Haemocytometer
Precipitation on gels – Single radial Immuno diffusion, Ouchterlony double diffusion
Widal test – slide, tube methods
Immunoelectrophoresis
VDRL test
Isolation of buffycoat
Food Microbiology
Detection of number of bacteria in milk by standard plate count (SPC)
Determination of quality of milk sample by methylene blue reductase test
Isolation and identification of bacteria from spoiled foods
14
SEMESTER II
CORE PAPER – 4
Report for the structure, morphology and life cycle of medically relevant bacteria and
eukaryotic microorganisms.
Account for systematic of bacteria and classification of bacteria, especially the methods
that are used for classification.
Account for mechanisms of transmission, virulence, pathogenicity of pathogenic
microorganisms and methods for treatment and prevention of medical important
microorganisms.
Account for the factors that influence the virulence of pathogenic microorganisms and
how virulence evolves.
The student able to understand diagnostic methodology for bacteria and fungi.
Text Books
15
1. Ananthanarayanan R and Jeyaram Panicker CK. Medical Microbiology, Orient Publications,
New Delhi.1990.
2. Jagadish Chander (1996) A Text Book of Medical Mycology. Interprint, New Delhi.
3. Brooks, G.F., Janet S. Butel, Stephen A, Jawwetz, Melnick & Adlerberg's Medical
Microbiology, 21st Edition, Prentice Hall International Inc. 1998.
Reference Books
1. Murray. P.R., G.S, Kobyashi, M. A. Pfaller and K. S. Rosenthal, Medical Microbiology, 1993,
(2nd Edition), Mosby St. Louis.
2. Greenwood, D., R.C.B. Slack, and J.F. Peutherer, Medical Microbiology 1997 (15th Edition),
Churchill Livingstone. New York.
3. Mims, C.A., Mims’ Pathogenesis of Infectious Diseases. 1995 (4th Edition), Academic Press,
London.
4. Gerard J. Tortora, Berdell, R. Funke, Christine L. Case, , Microbiology: An Introduction.8th
edition Hardcover: 944 pages, Publisher: Benjamin Cummings. 2004.
5. Kenneth J. Ryan,C. George Ray, John C. Sherris, Sherris Medical Microbiology : An
Introduction to Infectious Diseases , Hardcover: 992 pages, Publisher: McGraw-Hill
Professional, 2003.
16
SEMESTER II
CORE PAPER – 5
INDUSTRIAL MICROBIOLOGY
Course Objectives
1. To get equipped with theoretical and practical understanding of industrial microbiology.
2. To know how to source for microorganisms of industrial importance from the environment.
3. To know about design of fermentors, factors affecting growth and production.
4. To understand the rationale in medium formulation & design for microbial fermentation and to
appreciate the different types of fermentation processes
5. To comprehend the techniques and the underlying principles in downstream processing.
6. To appreciate how microbiology is applied in the manufacture of industrially significant
products.
17
propionate); Microbial transformation of steroids; Immobilization of microbial cells and
enzymes - methods and applications.
Text Books
1. Patel A.H. 2001. Industrial Microbiology. 3rd edition, Mac Millan India ltd, Chennai.
2. Casida J.E. 1986. Industrial Microbiology. 1st edition. Wiley Eastern publishers, UK.
3. D.K. Maheshwari, R.C. Dubey and S.C. Kang. 2006. Biotechnological Applications of
Microorganisms - A Techno-Commercial Approach. I.K. International Publishing House Pvt.
Ltd., New Delhi.
Reference Books
1. Doran P.M. 2013. Bioprocess Engineering Principles. Academic Press.
2. Waits, M.J., N.L. Morgan and G, Higton. Industrial Microbiology; An Introduction,
2001, Blackwell Science, Oxford.
3. Stanbury P.F., Whitaker A and Hall S.J. 2016. Principles of Fermentation technology. 3rd
edition, Butterworth-Heinemann.
4. Fermentation Microbiology and Biotechnology. 2006. Second Edition. Edited by E. M. T. El-
Mansi , C. F. A. Bryce , A. L. Demain and A. R. Allman. Taylor & Francis Inc.
5. Glazer A. N. and Nikaido H. Microbial Biotechnology: Fundamentals of Applied
Microbiology, Second Edition. 2007. Cambridge University Press. Cambridge, UK.
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SEMESTER II
CORE PAPER – 6
Text Book
1. Antony JF, Griffiths, Gilbert WM, Lewontin RC and Miller JH (2002). Modern Genetic
Analysis, Integrating Genes and Genomes, 2nd edition, WH Freeman and Company, New York.
2. Blackburn GM, Gait MJ. (1996). Nucleic acids in chemistry and biology. Oxford University
press.
3. Friefelder D. (1995). Molecular Biology, 2nd Edn. Narosa Publishing House.
19
Reference Books
1. Click. B.R. and-Pasternat J.J. (1994) Molecular Biotechnology. ASM press. Washington DC.
2. Benjamin Lewin (1997) Genes VI, Oxford University Press.
3. Watson JD, Hopkins NH, Roberts JW, Steitz JA, Weiner AM. (1998). Molecular biology of
the gene, 4th edition, Benjamin/Cummings publishing company.
4. Old, R.S. and Primrose, S.B. (1995) Principles of Gene manipulation. An introduction to
genetic Engineering. 5th Edition. Blackwell Scientific Publication, London.
5. Weaver. R. F. Molecular Biology. 3rd ed. Mc Graw Hill publilcation , 2005.
20
Internal Elective for same major students
Unit II: Spawn; Types Spawn, Preparation of Spawn, Mushroom Bed Preparation and factors
affecting Mushroom bed preparation, Compost: Materials used for Compost preparation ,
Compost Technology in Mushroom production- Casing; Raw material used for casing,
preparation of Casing Material. Important Sanitation during various stages of Mushroom
cultivation.
Unit III: Cultivation of important Mushroom: General process for the cultivation of Agaricus
bisporus (White button Mushroom), Pleurotus flabelltus (Oyster Mushroom), Volvariella
volvaceae (Paddy Straw Mushroom).
Unit IV: Mushroom nutritional value; (Proteins, Amino acids , Vitamins, Minerals ,
Carbohydrates) -Pests and diseases of Edible Mushrooms (Environmental, Fungal, Bacterial,
Viral, Insect Pests and Nematode diseases and competitor Moulds.
Text Books
1. Mushroom production and processing Technology, Pathak Yadav Gour (2010) Published by
Agrobios (India).
2. Mushroom- the art of cultivation, Harander Sing (1991). Sterling Publishers.
Reference Books
1. Biology and conservation of mushroom, Kaul T N (2001). Oxford and IBH Publishing
Company, New Delhi.
2. Changs. T.W.A. Hanyanes 1978. “Biology and cultivation of Mushrooms” Acad press. N.Y.
3. Zadrazil. F & K. Grabbe 1983 “Edible Mushroom, Biotechnology” Vol. 3, Weinheim: verlag
Chemie, Berlin.
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Semester II B. Biofertilizer Technology
Unit II: Biofertilization processes - Decomposition of organic matter; soil fertility, vermicomposting.
Mechanism of phosphate solubilization and phosphate mobilization. Nitrogen fixation - Free living and
symbiotic nitrogen fixation. Biotechnological application in nitrogen fixation.
Unit III: Nitrogenous Biofertilizers - Bacteria – Isolation, purification, mass multiplication, formulation
of inoculums and application of inoculants of Azospirillum and Azotobacter; Rhizobium - Isolation,
purification, mass multiplication, inoculum production, methods of application of Rhizobium inoculants.
Unit V: Mycorrhizae - Ecto and endomycorrhizae and their importance in agriculture. Isolation of AM
fungi - Wet sieving method and sucrose gradient method. Mass production of AM inoculants and field
applications. Isolation and Purification of phosphate solubilizers. Mass multiplication and field
applications of phosphate solubilizer (Pseudomonas striata).
Text Books
1. Somani, L.L., S.C. Bhandari, K.K. Vyas and S.N. Saxena. 1990. Biofertilizers, Scientific
Publishers - Jodhpur.
2. Tilak, K.V.B. 1991. Bacterial Biofertilizers, ICAR Pub., New Delhi.
Reference Books
1. Purohit, S.S., P.R. Kothari and S.K. Mathur, 1993. Basic and Agricultural Biotechnology,
Agro Botanical Pub. India.
2. Bagyaraj, D.J. and A. Manjunath. 1990. Mycorrhizal symbiosis and plant growth, Univ. of
Agricultural Sciences, Bangalore, India.
3. Subba Rao, N. S. 1988. Biological nitrogen fixation: recent developments, Mohan Primlani for
Oxford and IBH Pub. Co. (P) Ltd., India
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Semester II C. Intellectual Property Rights
Unit I: Introduction and the need for IPR - Introduction Concept and Origin of Industrial Designs –
Introduction- evolution – Legal protection - Layout Designs – Integrated circuits – Utility Models –
Protection of Industrial Designs. Major International Instruments concerning Intellectual Property Rights:
Paris Convention, 1883, the Berne Convention, 1886, the Universal Copyright Convention, 1952, the
WIPO Convention, 1967, the Patent Co-operation Treaty, 1970, the TRIPS Agreement, 1994.
Unit II: Nature of Copyright - Nature of Copyright - Subject matter of copyright- Registration
Procedure, Term of protection, Ownership of copyright, Assignment and licence of copyright -
Infringement, Remedies & Penalties – Related Rights - Distinction between related rights and copyrights.
Unit III: Patents - Elements of Patentability - Patents - Elements of Patentability: Novelty, Non
Obviousness, Industrial Application - Non - Patentable Subject Matter - Registration Procedure, Rights
and Duties of Patentee, Assignment and licence, Restoration of lapsed Patents, Surrender and Revocation
of Patents, Infringement, Remedies & Penalties. Concept of Trademarks - Different kinds of marks (brand
names, logos, signatures, symbols, well known marks, certification marks and service marks) - Non
Registrable Trademarks - Registration of Trademark.
Unit IV: Traditional Knowledge - Introduction Meaning and Scope of traditional Knowledge –
Interface between IP and traditional Knowledge – Need and Significance of protection - Documentation
of Traditional Knowledge – Databases – Traditional Knowledge Digital Library “TKDL” – AYUSH
Systems of Medicines – Biodiversity Register. Statutory Protection of Traditional knowledge in India
Traditional Knowledge as Property – Nature of Property in genetic Resources and associated traditional
Knowledge - Ownership in Traditional Knowledge.
Text Books
1. Nithyananda, K V. (2019). Intellectual Property Rights: Protection and Management. India, IN:
Cengage Learning India Private Limited.
2. Neeraj, P., &Khusdeep, D. (2014). Intellectual Property Rights. India, IN: PHI learning Private Limited
Reference Books
1. IPR, Biosafety and Bioethics. By Deepa Goel, Shomini Parashar.2013. Pearson.
2. Ahuja, V. K. , Law of Copyright and Neighbouring Rights, (2007), New Delhi, Lexis Nexis
3. Pradeep S. Mehta (ed.), Towards Functional Competition Policy for India, Academic Foundation,
(2005)
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External Elective for other major departments (Inter/multi disciplinary papers)
Unit I: Preservation and processing of food - Aim and objective, classification of foods by
case of food spoilage- methods of food preservation – principles of food preservation- Asepsis –
removal of microorganisms – maintenance of anaerobic conditions.
Unit II: Effect of Freezing and drying on Foods - Cold preservation – Freezing: requirements
of refrigerated storage - controlled low temperature, air circulation and humidity, changes in
food during refrigerated storage, progressive freezing, changes during freezing - Dehydration-
Normal drying curve, effect of food properties on dehydration, change in food during drying,
drying methods and equipments.
Unit III: Irradiation of food - Food Irradiation and Microwave Heating. Ionizing radiation and
sources, unit of radiations, direct and indirect radiation effects, safety and wholesomeness of
irradiated food. Microwave heating and application.
Unit IV: Packaging of foods - Properties of packaging material, factors determining the
packaging requirements of various foods and brief description of packaging of frozen products,
dried products, fats and oils and thermally processed foods.
Text Books
1. Frazier, W. C. and D.C, Westhoff, Food Microbiology, 1988 (4 th Edition), Tata McGraw Hill
Publishing Company Ltd., New Delhi.
2. James, M.J., Modern Food Microbiology, 2007 (2 nd Edition), CBS Publishers and Distributors,
New Delhi.
Reference Books
1.Adams, M.R., and Moss, M.G., Food Microbiology, 2005 (1st Edition), New Age International
(P) Ltd., New Delhi.
2. Banwant, G. J, Basic Food Microbiology, 2002 (2nd Edition) Chapman and Hall Inc., New
York
3. Fellows, P., Food Processing Technology: Principles and Practice, (2nd Edition), Woodhead
Publishing Limited and CRC Press LLC, England.
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SEMESTER II B. Infectious Diseases and its Control
Unit II: Occupational Diseases - examples, pathogens – source; Airborne diseases - examples,
pathogens – source; Vectorborne diseases - examples, Vectors, pathogens.
Unit III: Foodborne diseases – examples, pathogens – source and contamination; Food
hygiene; Foodborne infection, Food poisoning. Waterborne diseases – examples, pathogens –
source and contamination; Water quality.
Unit IV: Zoonotic Diseases – examples (Rabies, Anthrax), pathogens – source. Sexually
Transmitted infections - examples, pathogens involved.
Text Books
1. Ananthanarayan R & Paniker C.K.J. (2013). Text Book of Microbiology, 9 th edition,
Universities Press, Hyderabad.
2. Monica Cheesbrough (2003). District Laboratory Practice in Tropical Countries. Part 1 & 2,
Cambridge University Press.
Reference Books
1. Jawetz, Melnick, &Adelberg's. (2013). Medical Microbiology. 26 th edition. McGraw-Hill,
New York.
2. Murray. P.R., G.S, Kobyashi, M.A. Pfaller and K. S. Rosenthal, Medical Microbiology, 1993,
(2nd Edition), Mosby St. Louis.
3. Brooks, G.F., Janet S. Butel, Stephen A, Jawetz, Melnick & Adlerberg's Medical
Microbiology, 21st Edition, Prentice Hall International Inc. 1998.
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SEMESTER II C. Microbial Ecology
Unit I: Microbial ecology: Basic concepts, Types, microbial habitats and factors affecting
microbial populations; Microbial interactions - competition, commensalism, mutualism,
synergism and Parasitism. Population Ecology: Characteristics of population, Population growth
curves ((r and k selection) and population regulations.
Unit II: Microbial diversity in Normal environments: terrestrial (agricultural and desert soils),
aquatic (fresh water and marine), atmospheric (stratosphere) and animal (cattle, termites).
Text Books
1. Microbial Ecology By Atlas R.M., Bartha R., Benjamin Cummings Publishing Co, Redwood
City, CA, 1993. 8. Norris et al., 1994, Handbook of Bioremediation, Lewis Publishers, London.
2. Jogdand, S.N.2010. Environmental Biotechnology (Industrial Pollution Management),
Himalaya Publishing House, New Delhi.
Reference Books
1. Chatterji, A.K. 2005.Introductionto Environmental Biotechnology.
2. Environmental Microbiology by R. Mitchel (2nd edition), Wiley-Blackwell, 2009.
3. Environmental Microbiology by Raina Maier, Ian Pepper, & Charles Gerba, Academic Press,
2008.
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SEMESTER – II Lab course - 2
Medical Bacteriology
Antibiotic sensitivity tests - disc method, MIC
Study of normal microflora of skin
Collection and processing of – sputum, urine, faeces, pus, blood - and isolation of pathogens
Acid fast staining
Metachromatic granular staining
Medical Mycology
Fungal slide culture
Germ tube testing
Industrial Microbiology
Production of Ethanol by Yeast.
Isolation of amylase producing microorganisms
Isolation of protease producing microorganisms
Isolation of lipase producing microorganisms
Production of wine from grape juice
Molecular Biology
Isolation of Genomic DNA and quantification
Isolation of Plasmid and quantification
Preparation of competent cells using CaCl 2.
Isolation of RNA and quantification.
Preparation of standard buffers and determination of pH of a solution
Quantitative estimation of protein by Biuret method
Quantitative estimation of protein by Lowry’s method
Estimation of amino acids by ninhydrin method.
Absorption spectra- UV-Visible
Paper Chromatography of amino acids
SDS Gel electrophoresis
Agarose Gel electrophoresis
PCR technique
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