import numpy as np
import os
import glob
import SimpleITK as sitk
import matplotlib.pyplot as plt
img = sitk.ReadImage(r'C:\Users\320133514\Desktop\222.nii.gz')
img = sitk.GetArrayFromImage(img)
#print(img)
# print(img.shape)
# print(type(img))
# print(img.ndim)
# print(img[0:24, 50:370,0:320])
img2 = img[11:35, 0:320, 100:420]
print(img2)
print("img2.shape:",img2.shape)
out = sitk.GetImageFromArray(img2)
sitk.WriteImage(out,r'C:\Users\320133514\Desktop\3201.nii.gz')
print("ok")
img3 = sitk.ReadImage(r'C:\Users\320133514\Desktop\3201.nii.gz')
img3 = sitk.GetArrayFromImage(img3)
print("img3.shape:", img3.shape)
print(img3.ndim)
#
# dataname_list = os.listdir(data_path)
# dataname_list.sort()
# ori_data = sitk.ReadImage(os.path.join(data_path, dataname_list[2])) # 读取一个数据
# data1 = sitk.GetArrayFromImage(ori_data) # 获取数据的array
# print(dataname_list[2], data1.shape, data1[38,255,255]) #打印数据name、shape、某一个位置的元素的值(z,y,x)
#
# plt.imshow(data1[100,:,:]) # 对第100张slice可视化
# plt.show()
读取数据,并将数据保存为二进制文件,文件大小为32032024*4(float32)
import pickle
import numpy as np
import SimpleITK as sitk
#
img3 = sitk.ReadImage('320.nii.gz')
a = sitk.GetArrayFromImage(img3)
print("a.dim:",a.ndim)
print(a.shape)
print(type(a))
print(a.ndim)
#
a.tofile('new320nnunet.bin')
# print("a.shape:", a.shape)
#
# # print(a_.shape)
# # print(type(a_))
# # print(a_.ndim)
a_ = np.fromfile('new320nnunet.bin', dtype=np.float32)
a_.shape = 24, 320, 320
print(a)
print(a_.shape)
print(type(a_))
print("a_.ndim:",a_.ndim)