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summarizeOverlaps warnings

Status: Open.

#36 In Bioconductor/GenomicAlignments;

· sunta3iouxos opened on Oct 30, 2024

Error in isCompatibleWithSkippedExons() for single-end read alignments w/ more than 3 junctions

Status: Open.

#33 In Bioconductor/GenomicAlignments;

· rcastelo opened on Dec 11, 2023

Permission for SweaveToRmd

Status: Open.

#27 In Bioconductor/GenomicAlignments;

· SunSummoner opened on Mar 8, 2023

mapFromAlignments() and soft-clipping

Status: Open.

#12 In Bioconductor/GenomicAlignments;

· hpages opened on Feb 14, 2020

Clarify Strandedness Options for SummarizeOverlaps in Documentation

Status: Open.

#7 In Bioconductor/GenomicAlignments;

· groverj3 opened on Jul 25, 2019

Clarify Counting of Query-Spanning Reads in Documentation

Status: Open.

#6 In Bioconductor/GenomicAlignments;

· DarioS opened on Jul 19, 2019

Performance of readGAlignmentPairs with inter-chromosomal pairs

Status: Open.

#4 In Bioconductor/GenomicAlignments;

· LTLA opened on Mar 31, 2019

Error using granges with unused argument on.discordant.seqnames

Status: Open.

#3 In Bioconductor/GenomicAlignments;

· sda910722 opened on Jun 20, 2018