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1. LinearFold LinearFold Public

   The new source code of the LinearFold, linear-time prediction for RNA secondary structures

   C++ 183 51

2. LinearPartition LinearPartition Public

   Linear-Time Approximation of RNA Folding Partition Function and Base Pairing Probabilities

   C++ 31 22

3. LinearTurboFold LinearTurboFold Public

   An end-to-end linear-time algorithm for structural alignment and conserved structure prediction of RNA homologs

   C++ 11 6

4. LinearSampling LinearSampling Public

   Improved and linear-time stochastic sampling algorithm for RNA secondary structures

   C++ 10 2

5. LinearAlifold LinearAlifold Public

   LinearAlifold

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6. EnsembleDesign EnsembleDesign Public

   C 6