Safe Haskell	None
Language	Haskell98

Biobase.Ensembl.HTTP

Description

Interface for Ensembl

Documentation

startXRefSession :: Text -> Text -> IO (Either String [EnsemblEntry]) Source #

requestGOTermsWithGeneIds :: [Text] -> IO [(Text, [Text])] Source #

requestUniProtWithGeneIds :: [Text] -> IO [(Text, Text)] Source #

data EnsemblEntry #

Constructors

EnsemblEntry
Fields display_id :: Maybe Text primary_id :: Maybe Text version :: Maybe Text description :: Maybe Text dbname :: Maybe Text synonyms :: [Text] info_text :: Maybe Text info_type :: Maybe Text db_display_name :: Maybe Text

Instances

Show EnsemblEntry
Instance details Defined in Biobase.Ensembl.REST.Types Methods showsPrec :: Int -> EnsemblEntry -> ShowS # show :: EnsemblEntry -> String # showList :: [EnsemblEntry] -> ShowS #
Generic EnsemblEntry
Instance details Defined in Biobase.Ensembl.REST.Types Associated Types type Rep EnsemblEntry :: Type -> Type # Methods from :: EnsemblEntry -> Rep EnsemblEntry x # to :: Rep EnsemblEntry x -> EnsemblEntry #
ToJSON EnsemblEntry
Instance details Defined in Biobase.Ensembl.REST.Types Methods toJSON :: EnsemblEntry -> Value # toEncoding :: EnsemblEntry -> Encoding # toJSONList :: [EnsemblEntry] -> Value # toEncodingList :: [EnsemblEntry] -> Encoding #
FromJSON EnsemblEntry
Instance details Defined in Biobase.Ensembl.REST.Types Methods parseJSON :: Value -> Parser EnsemblEntry # parseJSONList :: Value -> Parser [EnsemblEntry] #
type Rep EnsemblEntry
Instance details Defined in Biobase.Ensembl.REST.Types type Rep EnsemblEntry = D1 (MetaData "EnsemblEntry" "Biobase.Ensembl.REST.Types" "BiobaseEnsembl-0.1.0.0-26jgw7089p5fZcjPyf9tS" False) (C1 (MetaCons "EnsemblEntry" PrefixI True) (((S1 (MetaSel (Just "display_id") NoSourceUnpackedness NoSourceStrictness DecidedLazy) (Rec0 (Maybe Text)) :: S1 (MetaSel (Just "primary_id") NoSourceUnpackedness NoSourceStrictness DecidedLazy) (Rec0 (Maybe Text))) :: (S1 (MetaSel (Just "version") NoSourceUnpackedness NoSourceStrictness DecidedLazy) (Rec0 (Maybe Text)) :: S1 (MetaSel (Just "description") NoSourceUnpackedness NoSourceStrictness DecidedLazy) (Rec0 (Maybe Text)))) :: ((S1 (MetaSel (Just "dbname") NoSourceUnpackedness NoSourceStrictness DecidedLazy) (Rec0 (Maybe Text)) :: S1 (MetaSel (Just "synonyms") NoSourceUnpackedness NoSourceStrictness DecidedLazy) (Rec0 [Text])) :: (S1 (MetaSel (Just "info_text") NoSourceUnpackedness NoSourceStrictness DecidedLazy) (Rec0 (Maybe Text)) :: (S1 (MetaSel (Just "info_type") NoSourceUnpackedness NoSourceStrictness DecidedLazy) (Rec0 (Maybe Text)) :: S1 (MetaSel (Just "db_display_name") NoSourceUnpackedness NoSourceStrictness DecidedLazy) (Rec0 (Maybe Text)))))))