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7.4 years ago
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Comment: Combining analysis of EPICv1 and EPICv2 using SeSAMe package
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morton
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Have you tried using only the shared probes between the two arrays for downstream analysis? I believe SeSAMe supports probe filtering [bloc…
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Chenghao
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I also figure that what `logFC` calculates isn't really the log-fold change. `logfc` calculates $p_1 \* log(y_1) - p_0 \* log(y_0)$, while …
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Geoff
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Thank you for the guidance! I wish I could share more details of the data
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We are still working on adding tidyomics syntax to operate on the rowRanges of a ranged SE without breaking it off and using *plyranges*.
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You ask a good question. Twin pairs are generally a very powerful way to control for genetic and environmental differences. duplicateCorrel…
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