Bioconductor Tfutils

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TFutils mouse gene convert

4.0 years ago nicocillari • 0

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Answer: DESeq2 empirical bayes: variance of the prior for log fold changes (LFC) by Michael Love 43k

> why the variance contributed by sampling distribution of LFC isn't separated out Good question, we say "though here we do not subtract t…

Comment: Interaction in Design Experimental by Ferdinand David • 0

So, the design relies on what is my purpose, right? Not examine in all conditions like a regression model? In my understanding, I have in…

Comment: How to interpret MAST coefficients by Chenghao ▴ 10

Maybe you have solved those problems already, but just in case, I'd like to share my thoughts... 1. The model adjusts for some covariates …

Answer: Interaction in Design Experimental by swbarnes2 ★ 1.4k

There are a lot of kinds of questions you could ask with this data, but not all of them will necessarily be interesting. You are proba…

Answer: Deseq2 paired sample in the design is considered as "batch"? by ATpoint ★ 4.9k

It's the same. The analysis will be run with adjustment for the donor differences. Technically, that's the same as a batch, being an unwant…

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