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Aesha Forensic Dna Assignment

This document lists 20 genetic loci used in the Combined DNA Index System (CODIS) for DNA profiling, including their other names, chromosomal locations, and types of repeat sequences. The loci are located on various chromosomes and contain different short tandem repeat sequences such as [AGAT], [TATC], and [GATA] that can be used to generate DNA profiles for identification.

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82 views2 pages

Aesha Forensic Dna Assignment

This document lists 20 genetic loci used in the Combined DNA Index System (CODIS) for DNA profiling, including their other names, chromosomal locations, and types of repeat sequences. The loci are located on various chromosomes and contain different short tandem repeat sequences such as [AGAT], [TATC], and [GATA] that can be used to generate DNA profiles for identification.

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Loci used in Other Name given Chromosomal Type of sequence (Repeat sequence)

CODIS location
§ CSF1PO CSF Chromosome – [AGAT]
5 – around
149 Mb
§ FGA FIBRA Chromosome –
4 – around [TTTC]3TTTTTTCT[CTTT]nCTCC[TTCC]2
156 Mb
§ THO1 HUMTH01 Chromosome – [AATG] , [TCAT]
11 – around 2
Mb
§ TPOX hTPO Chromosome – [AATG]
2 – around 1
Mb
§ VWA VWA31A Chromosome – [AGAT], [TCTA] , [TCTG],
12 – around [TCCA]
20 Mb
§ D3S1358 Chromosome – [AGAT], [TCTA]
3 – around 45
Mb
§ D5S818 D5 Chromosome – [AGAT]
5 – around
123 Mb
§ D7S820 D7 Chromosome – [GATA]
7 – around 83
Mb
§ D8S1179 D6S502 Chromosome – [TATC]
8 – around
125 Mb
§ D13S317 D13 Chromosome – [GATA], [TATC]
13 – around
80 Mb
§ D16S539 D16 Chromosome – [GATA]
16 – around
86 Mb
§ D18S51 D18 Chromosome – [GAAA]
18 – around
59 Mb
§ D21S11 Chromosome – [TCTA], [TCTG]
21 – around
19 Mb
§ D1S1656 UniSTS: 58809 Chromosome -[TAGA]n[TGA]0-1[TAGA]n[TAGG]0-1[TG]5
1 - 228.972
Mb
§ D2S441 CHLC.GATA72A05 Chromosome - [TCTA]
2-
68,213,613 bp
§ D2S1338 UniSTS: 30509 Chromosome - [TGCC]n[TTCC]n
2 - 218.705
Mb
§ D10S1248 CHLC.GGAA23C05 Chromosome -[GGAA]n
10 -
130,566,908
bp
§ D12S391 CHLC.GATA 11 Chromosome -[AGAT]8-17[AGAC]6-10[AGAT]0-1
HO8. `12

§ D19S433 CHLC.GGAA2A03 Chromosome -


19 -35.109 (AAGG)(AAAG)(AAGG)(TAGG)[AAGG]n
Mb
§ D22S1045 CHLC.ATA37D06 Chromosome - [ATT]n
22 -
35,779,368 bp
Answer the following question on loci used in DNA profiling; this assignment
will be due at the start of lecture in next week.

1. Write out the information for the 20 loci used in CODIS (Set up a table with
their names, chromosomal location, and type of sequence (what is the repeat –
the actual letters) (20 marks)

http://strbase.nist.gov/str_fact.htm

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