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Whole Cell Extract Preparation Protocol

1) Cells were scraped from a confluent plate into a microfuge tube and spun down to form a pellet. 2) The cell pellet was frozen in dry ice/methanol and then resuspended in Buffer C. 3) The tube was spun again and the protein-containing supernatant was collected to quantify the protein concentration using a BioRad protein assay.

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80 views1 page

Whole Cell Extract Preparation Protocol

1) Cells were scraped from a confluent plate into a microfuge tube and spun down to form a pellet. 2) The cell pellet was frozen in dry ice/methanol and then resuspended in Buffer C. 3) The tube was spun again and the protein-containing supernatant was collected to quantify the protein concentration using a BioRad protein assay.

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biotech_vidhya
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© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
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WHOLE CELL EXTRACT PREPARATION

Materials:
plate of cells (80-100% confluent)
cold 1xPBS
cell scraper (Midwest Scientific #TP9902)
dry ice/methanol
Buffer C
Bio-Rad Protein Assay Dye Reagent Concentrate (cat#500-0006)

Procedure:
1. Aspirate off media from 10 cm TC plate.
2. Rinse with cold 1xPBS (pipet about 2ml onto plate and swirl around gently).
Aspirate off 1xPBS.
3. Add 1 ml cold 1xPBS to plate.
4. Scrape cells to one area (at the edge of the plate).
5. Pipet cells into microfuge tube.
6. Spin cells for 10 seconds in microfuge tube.
7. Aspirate off 1xPBS (be careful not to lose the pellet).
8. Freeze cell pellet in dry ice/methanol.
9. Resuspend pellet in 20µl Buffer C.

Buffer C (100ml) Stock Volume


25% glycerol 100% 25 ml
0.42 M NaCl 4M 10.5 ml
1.5 mM MgCl2 1M 150 µl
0.2 mM EDTA 0.5 M 40 µl
20 mM HEPES (pH 7.9) 1M 2 mls
• add distilled water up to 100 ml
• add DTT and PMSF to 0.5 mM before use

10. Spin tube for 15 seconds.


11. The proteins are suspended in the supernatant. Collect the supernatant to
determine the protein concentration by BioRad assay.

Submitted by: Sue Fox

III.C.3

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