Cyanobacteria Fermentation Pathways
Cyanobacteria Fermentation Pathways
Fermentation in cyanobacteria 1
Lucas J. Stal a *, Roy Moezelaar b
a
Netherlands Institute of Ecology, Centre for Estuarine and Coastal Ecology, P.O. Box 140, NL-4400 AC Yerseke, The Netherlands
b
Agrotechnological Research Institute (ATO-DLO), P.O. Box 17, NL-6700 AA Wageningen, The Netherlands
Received 24 April 1997; revised 1 August 1997; accepted 2 August 1997
Abstract
Although cyanobacteria are oxygenic phototrophic organisms, they often thrive in environments that become periodically
anoxic. This is particularly the case in the dark when photosynthetic oxygen evolution does not take place. Whereas
cyanobacteria generally utilize endogenous storage carbohydrate by aerobic respiration, they must use alternative ways for
energy generation under dark anoxic conditions. This aspect of metabolism of cyanobacteria has received little attention but
nevertheless in recent years a steadily increasing number of publications have reported the capacity of fermentation in
cyanobacteria. This review summarizes these reports and gives a critical consideration of the energetics of dark fermentation in
a number of species. There are a variety of different fermentation pathways in cyanobacteria. These include homo- and
heterolactic acid fermentation, mixed acid fermentation and homoacetate fermentation. Products of fermentation include CO2 ,
H2 , formate, acetate, lactate and ethanol. In all species investigated, fermentation is constitutive. All enzymes of the
fermentative pathways are present in photoautotrophically grown cells. Many cyanobacteria are also capable of using
elemental sulfur as electron acceptor. In most cases it seems unlikely that sulfur respiration occurs. The main advantage of
sulfur reduction seems to be the higher yield of ATP which can be achieved during fermentation. Besides oxygen and elemental
sulfur no other electron acceptors for chemotrophic metabolism are known so far in cyanobacteria. Calculations show that the
yield of ATP during fermentation, although it is low relative to aerobic respiration, exceeds the amount that is likely to be
required for maintenance, which appears to be very low in these cyanobacteria. The possibility of a limited amount of
biosynthesis during anaerobic dark metabolism is discussed.
Keywords: Fermentation; Cyanobacteria; Dark metabolism; Embden-Meyerhof-Parnas pathway; Lactate dehydrogenase; Lactate fermen-
tation; Mixed acid fermentation; Sulfur reduction
Contents
1. Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 180
2. Occurrence of dark anoxic conditions in cyanobacterial communities . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 182
2.1. Anoxic hypolimnia . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 182
2.2. Microbial mats . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 182
* Corresponding author. Tel.: +31 (113) 577497; Fax: +31 (113) 573616; e-mail: [email protected]
1
Publication 2274 of the Centre of Estuarine and Coastal Ecology, Yerseke, The Netherlands.
0168-6445 / 97 / $32.00 ß 1997 Federation of European Microbiological Societies. Published by Elsevier Science B.V.
PII S 0 1 6 8 - 6 4 4 5 ( 9 7 ) 0 0 0 5 6 - 9
180 L.J. Stal, R. Moezelaar / FEMS Microbiology Reviews 21 (1997) 179^211
Table 1
a
Dark chemoorganotrophic growth of cyanobacteria
glycine, glutamine
Plectonema boryanum aerobic glucose, fructose, sucrose, ribose, maltose, 49 h^13 d [29^32]
mannitol
(Aphanocapsa sp.)
a
Adapted and extended from [28].
Oscillatoria terebriformis [28]. Moezelaar and Stal during the dark, anoxygenic phototrophic bacteria
[22] reported anaerobic decomposition of exogenous generally face anoxic conditions. In order to be
glucose in Microcystis aeruginosa and recently ob- able to generate energy in the dark these bacteria
tained evidence for the occurrence of some growth must be able to carry out fermentation. This has
[37]. With a few exceptions chemoorganotrophic been shown for instance in the anoxygenic non-sul-
growth of cyanobacteria on external substrates is fur purple bacterium Rhodospirillum rubrum [38,39].
much slower than under photoautotrophic condi- Other species can not grow unless an electron accept-
tions. This is probably because the uptake of the or such as dimethylsulfoxide [40] or trimethylamine-
substrate is limiting. As mentioned above, O. agard- N -oxide [41] are present. A very e¤cient mode of
hii is able to maintain its growth rate in the dark at anaerobic dark metabolism has been demonstrated
the same value as in the light, but only at the expense in the anoxygenic phototrophic bacterium Chromati-
of endogenous storage carbohydrate which will last um vinosum . This species has been shown to convert
for a limited period [6,7]. glycogen into poly- L-hydroxybutyrate, using elemen-
Whereas cyanobacteria and eukaryotic microalgae tal sulfur as electron acceptor [42]. This metabolism
normally display aerobic respiratory metabolism results only in a minor loss of storage carbon but
182 L.J. Stal, R. Moezelaar / FEMS Microbiology Reviews 21 (1997) 179^211
Anabaena and Aphanizomenon survive as akinetes, di¡usion of oxygen into the soil is reduced by stag-
resting stages that di¡erentiate from vegetative cells nant water.
during blooming [52]. Species of the genus Microcys-
tis, however, do not form such morphologically dis-
tinct resting stages, but survive as colonies of vege- 3. Fermentation in cyanobacteria
tative cells in the sediment. In most cases the bottom
sediments of lakes are permanently in darkness and The occurrence and survival of cyanobacteria in
anoxic. Under these conditions Microcystis is able to environments that are permanently anoxic or be-
maintain cellular integrity and retains the capacity of come anoxic at night implies the capability of anae-
photosynthesis [53,54]. Although the cells also retain robic dark energy generation. Species from such en-
their gas vacuoles, the colonies are not buoyant. The vironments have been shown to be capable of
Table 2
Cyanobacteria capable of fermentation
Organism Strain, origin Fermentation pathway Productsa Ref.
Anabaena azollae AaL symbiont from Azolla caroliniana homoacetate acetate (lactate, CO2 , H2 ) [10]
Anabaena azollae AaN symbiont from Azolla caroliniana homoacetate acetate (lactate, CO2 , H2 ) [10]
Anabaena azollae AaS symbiont from Azolla ¢liculoides homoacetate acetate (lactate, CO2 , H2 ) [10]
Anabaena siamensis As1 paddy ¢eld homoacetate acetate (CO2 , H2 ) [10]
Cyanothece PCC 7822 (Inst. Pasteur) mixed acid H2 , ethanol, lactate, formate, acetate [60]
Microcoleus chthonoplastes microbial mat mixed acid H2 , ethanol, lactate, formate, acetate [61]
Microcystis aeruginosa PCC 7806 (Inst. Pasteur) mixed acid H2 , ethanol, acetate [22]
Nostoc sp. Cc symbiont from Cycas circinalis homoacetate acetate (lactate, CO2 , H2 ) [10,62]
Nostoc sp. Al2 symbiont from Anthoceros laevis homoacetate acetate (lactate, CO2 , H2 ) [10]
Degradation of the osmoprotectant raises the ques- gen reserve [69]. It has been proposed that cyanobac-
tion if and how the cells will maintain the osmotic teria may degrade arginine to ornithine via the dihy-
pressure of the cytoplasm. It is conceivable that in- drolase route, which would allow the production of
organic ions such as K and Cl3 may temporarily ATP by substrate-level phosphorylation, even under
serve to maintain osmotic pressure [67], and that the anaerobic conditions in the dark [1]. However, this
pool of organic osmolytes will be replenished in the has not been demonstrated and Stal et al. [70] con-
subsequent light period. cluded that this mode of energy generation did not
A few cyanobacteria are capable of accumulating occur in O. limosa.
poly-L-hydroxybutyrate (PHB) [68] but there is no
evidence that this storage compound is used in 3.2. Fermentation products and the diversity of
dark energy metabolism. Decomposition would re- fermentation pathways
quire the tricarboxylic acid (TCA) cycle which is
absent in all of the cyanobacteria investigated. Stal The ¢rst cyanobacterium reported to be capable of
[68] proposed a role as C reserve for PHB, providing fermentative energy generation was O. limnetica [44].
intermediates for biosynthesis. A role of PHB in cy- This organism carries out a homolactic fermentation,
anobacteria similar to that found in the purple sulfur and produces about 1.4^1.8 mol of lactate per mol of
bacterium Chromatium vinosum [42] was also consid- glucose degraded. Although the pathway involved
ered. However, in O. limosa PHB was not formed as was not examined it is likely that conversion of glu-
a product of fermentation even when sulfur as elec- cose to lactate, as in lactic acid bacteria, involves the
tron acceptor was present (L.J. Stal, unpublished Embden-Meyerhof-Parnas glycolytic pathway. In
results). contrast, the marine benthic cyanobacterium O. li-
Some cyanobacteria contain cyanophycin (multi-L- mosa degrades glycogen via the heterolactic fermen-
arginine poly-L-aspartic acid) which serves as a nitro- tation pathway, which shares some sequences with
L.J. Stal, R. Moezelaar / FEMS Microbiology Reviews 21 (1997) 179^211 185
refer to the enzymes involved : 1, enzymes of the oxidative pentose phosphate pathway ; 2, acetaldehyde dehydrogenase ; 3, alcohol dehy-
the oxidative pentose phosphate pathway (Fig. 1) quite rare among chemoheterotrophic bacteria, it
[63]. The freshwater unicellular species Cyanothece has been reported to occur in several cyanobacterial
PCC7822 performs a mixed acid fermentation with species. The production of three mol of acetate from
formate as characteristic fermentation product [60]. one mol of glucose by the symbiotic, diazotrophic
Based on the ratios of glucose utilization and prod- cyanobacterium Nostoc sp. strain Cc and the absence
uct formation it was calculated that both the glyco- of other products strongly suggested a homoacetic
lytic and the oxidative pentose phosphate pathway fermentation, but no enzymatic evidence was given
were operative during fermentation (Figs. 1, 3 and for this [62]. Also in O. limosa this type of fermen-
4). However, the enzymes that were demonstrated in tation was reported to occur but curiously not with
cell-free extracts did not include the key enzymes of glycogen as the substrate [63]. These authors noticed
the glycolytic pathway (6-phosphofructokinase) and that the production of acetate did not correlate with
the phosphoketolase pathway (phosphoketolase) glycogen degradation. Moreover, the degradation of
[71]. Whereas homoacetic fermentation is already glycogen was fully accounted for by the fermentation
186 L.J. Stal, R. Moezelaar / FEMS Microbiology Reviews 21 (1997) 179^211
products lactate and ethanol. Instead the production occurrence of the homoacetic fermentation pathway
of acetate was found to correlate with the degrada- in O. limosa was supported by the demonstration of
tion of trehalose, which serves as osmoprotectant in the key enzymes in cell-free extracts [63,73] (i.e. for-
O. limosa. For each mol of trehalose degraded 5^6 mate dehydrogenase, carbon monoxide dehydrogen-
mol of acetate was recovered (Fig. 2). The use of ase, pyruvate:ferredoxin oxidoreductase and acetate
osmoprotectant as substrate for fermentative energy kinase). Also the presence and activity of trehalase
generation is surprising and it is unknown why this was demonstrated in cell-free extracts of O. limosa.
compound is used for this purpose and how osmotic The source of the nitrogenase-independent produc-
equilibrium of the cell cytoplasm is maintained. The tion of H2 by this organism is a reversible hydro-
L.J. Stal, R. Moezelaar / FEMS Microbiology Reviews 21 (1997) 179^211 187
genase [70,74]. Homoacetic fermentation in O. limosa that were grown under a light-dark regime and that
usually yielded a little less than the 6 acetate that contained relatively low amounts of glycogen more
should be expected from the degradation of treha- than four times more ethanol was produced than
lose, and the balance was made up by some CO2 and acetate. This phenomenon was attributed to the ac-
H2 . It was proposed that the source of hydrogen was tivity of ferredoxin:NADP oxidoreductase. In con-
the reduced ferredoxin produced from the decarbox- trast, cultures grown under continuous light and
ylation of pyruvate by pyruvate:ferredoxin oxidore- containing a large amount of glycogen formed about
ductase (Fig. 2). equimolar amounts of ethanol and acetate and, in
More recently, Moezelaar and Stal [22] reported a addition, produced some lactate [37,75] (Fig. 3).
mixed acid fermentation in the unicellular cyanobac- Moezelaar et al. [61] reported a mixed-acid fer-
terium Microcystis aeruginosa PCC 7806, a fresh- mentation in the marine benthic cyanobacterium
water species known to produce nuisance water M. chthonoplastes, a cosmopolitan microbial mat-
blooms. This organism degraded glycogen via the forming organism. As was the case in O. limosa,
Embden-Meyerhof-Parnas pathway, producing M. chthonoplastes not only fermented glycogen but
CO2 , ethanol, acetate and some H2 (Fig. 3). In cells also part of its osmoprotectant. The heteroside O-K-
188 L.J. Stal, R. Moezelaar/FEMS Microbiology Reviews 21 (1997) 179^211
Likewise, the occurrence of certain enzymes might [78,79]. Since a catabolic role for the enzyme in a
indicate the ability of fermentative energy genera- fermentative metabolism was not considered, the
tion. Such enzymes have indeed been reported to search for a function of pyruvate:ferredoxin oxido-
occur in cyanobacteria, but a role for these enzymes reductase in cyanobacteria focused on a role in N2 -
in fermentative metabolism was not considered. In- ¢xation. Leach and Carr [78] suggested that in the
stead, they were supposed to have other physiolog- heterocystous Anabaena variabilis the ferredoxin re-
ical functions. duced by pyruvate:ferredoxin oxidoreductase could
The enzyme pyruvate:ferredoxin oxidoreductase is be used as electron donor for nitrogenase. This idea
found in many obligately and facultatively anaerobic is supported by the observation of Neuer and Bothe
bacteria in which it is involved in fermentative deg- [80] that in Anabaena cylindrica activity of pyru-
radation of pyruvate [77]: vate:ferredoxin oxidoreductase was almost exclu-
sively con¢ned to heterocysts. However, the nitro-
pyruvate CoA 2Fdox ! genase-independent production of H2 under dark
anoxic conditions by A. variabilis [81] and Anabaena
acetyl3CoA CO2 2Fdred PCC7120 [82] might involve pyruvate:ferredoxin ox-
idoreductase for the supply of reductant for hydro-
Among cyanobacteria, pyruvate:ferredoxin oxidore- genase. In O. limosa [63] and Cyanothece PCC7822
ductase was ¢rst found in two N2 -¢xing species [60], pyruvate:ferredoxin oxidoreductase indeed ap-
190 L.J. Stal, R. Moezelaar / FEMS Microbiology Reviews 21 (1997) 179^211
pears to serve both processes. When grown in a me- enzymes with a possible function in fermentation in
dium devoid of combined nitrogen, both organisms O. limosa, M. chthonoplastes, M. aeruginosa and Cy-
are capable of dark N2 ¢xation, whereas in nitrate- anothece sp. are given. In all cases the speci¢c activ-
grown cells the enzyme is presumably involved in ities measured were su¤cient to explain the in vivo
fermentative H2 production. observed rates of fermentation. The enzymes de-
Sanchez et al. [83] reported the presence of NAD- tected were used as con¢rmation for the supposed
dependent lactate dehydrogenases in a number of fermentation pathway as deduced from the nature
unicellular cyanobacteria. Under in vivo conditions and ratios of the fermentation products formed.
these enzymes catalyze the conversion of pyruvate When comparisons between the four cyanobacteria
into lactate rather than the reverse reaction [84] were possible it was noticeable that large di¡erences
(see also Section 4). in speci¢c activities existed, except for acetate kinase
The enzymes acetate kinase and phosphotransace- which was in the same order of magnitude in all
tylase in A. variabilis were assumed to be involved in organisms.
the conversion of exogenous acetate to acetyl-CoA
[85]. Acetyl-CoA synthetase, which is involved in 3.4. The Embden-Meyerhof-Parnas pathway
many other bacteria in the activation of acetate,
was not found in A. variabilis. In fermenting bacte- All cyanobacteria examined thus far seem to em-
ria, acetate kinase and phosphotransacetylase oper- ploy the Embden-Meyerhof-Parnas (EMP) pathway
ate in the opposite direction and thus provide a path- during fermentation for degradation of glucose resi-
way for synthesis of ATP [77]. dues to pyruvate. Involvement of the EMP pathway
In Table 3 the speci¢c activities of a number of has been assumed on the basis of similarity of the
L.J. Stal, R. Moezelaar / FEMS Microbiology Reviews 21 (1997) 179^211 191
Table 3
Comparison of speci¢c activities of enzymes involved in fermentation in the cyanobacteria Oscillatoria limosa (O. lim.), Microcoleus
chthonoplastes (M. chthon.), Microcystis aeruginosa (M. aerug.) (PCC7806) and Cyanothece sp. (PCC7822).
Enzyme O. lim. M. chthon. M. aerug. Cyanothece
Fermentation Heterolactic (glycogen) Mixed acid
Homolactic (trehalose)
CO dehydrogenase 0.6 0 nd nd
Pyruvate kinase nd 37 63 nd
6-Phosphofructokinase 0.005 8 23 nd
c
Fructose-1,6-bisphosphate aldolase 115 nd 19 9.2
c
Glyceraldehyde-3-phosphate dehydrogenase 0.252 16 92 nd
c
Glucose-6-phosphate dehydrogenase nd 118 67 nd
c
6-Phosphogluconate dehydrogenase nd 85 40 nd
fermentation pattern to those of other bacteria tion was not even conceived (Table 4). However,
[22,44,60,61,63], but for only three species, O. limosa there is evidence that failure to detect signi¢cant ac-
[73], Microcystis PCC7806 [22] and M. chthono- tivities of this enzyme may be due to absence of
plastes [61], has this assumption been con¢rmed by stabilizing compounds during preparation of the
the presence of the key enzyme of the EMP pathway,
6-phosphofructokinase, in cell-free extracts of axenic
cultures (Table 3). In O. limosa the activity of 6-
Table 4
5.8 [89]
The occurrence of 6-phosphofructokinase and the
physiological signi¢cance of the EMP pathway in
Nostoc muscorum 25 [87]
tokinase were found in several species, the activity Synechococcus PCC6716 1.3 [83]
detected in others was so low that a metabolic func- The speci¢c activities are given in nmol min
31 (mg protein)
31 .
192 L.J. Stal, R. Moezelaar/FEMS Microbiology Reviews 21 (1997) 179^211
cell-free extract. In cell-free extracts ofM. chthono- In O. limosa [63] and Cyanothece PCC7822 [60],
plastes , no 6-phosphofructokinase is detected unless the OPP pathway is also operative during fermenta-
its substrate, fructose-6-phosphate, is added to the tion. Remarkably, O. limosa
employs the OPP path-
cell suspension prior to cell breakage [61]. Omission way for degradation of glycogen, whereas the osmo-
leads to a complete loss of activity which cannot be protectant trehalose is degraded via the glycolysis.
restored by adding it to the assay mixture. Similarly, Stal et al. [70] have proposed that the heterolactic
Fewson et al. [87] reported that in Anabaena acid and homoacetate fermentation in this organism
variabilis Anacystis nidulans
, , andNostoc muscorum must be con¢ned to di¡erent compartments in the
no activity of 6-phosphofructokinase was detected cell. In their model the EMP pathway (involved in
unless extracts were prepared with cysteine present. homoacetate fermentation) (Fig. 2) is in the cyto-
This may also have been the reason for the very low plasm which contains the substrate trehalose, where-
O. limosa
ductive mode and allow oxidative processes only in Moezelaar et al. [75] found NAD-dependent lac-
the dark. Part of the OPP pathway is involved in tate dehydrogenase (LDH) (EC 1.1.1.27) in the uni-
heterolactic fermentation, which occurs in O. limosa cellular cyanobacterium Microcystis aeruginosa PCC
[63]. In the majority of cyanobacteria fermentation 7806, although they were initially unable to detect
involves the EMP pathway which does not seem to any lactate production during fermentation. This
play a role in phototrophic metabolism. It is there- was remarkable since the speci¢c activity of LDH
fore also possible that fermentation pathways in in Microcystis PCC7806 was 0.14^0.16 U (mg
these cyanobacteria lack a good regulation and protein)31 the highest reported of cyanobacterial
give occasion to suppose that fermentation occurs cell-free extracts. Activity of LDH from Microcystis
regardless of the prevailing conditions. On the other PCC7806 was like other NAD-dependent LDHs in-
hand, the activities of enzymes of fermentative path- hibited by ATP and ADP [83,84]. However, the en-
Table 5
creases from 1.34 to 1.46 (nmol min31 (mg cell
Comparison of fermentation in Microcoleus chthonoplastes in the protein)31 ) when compared with a culture in the
presence and absence of elemental sulfur
presence of sulfur. The carbon and redox balances
Product 3S³ +S³
of the latter fermentation indicate that despite the
Ethanol 1.04 0.31 higher energy yield less biosynthesis could have tak-
Acetate 1.00 1.72
en place. Because of this, the energy available for
Formate
H2
0.72
0.09
0.28
0 maintenance purposes increased from m q
ATP 0.88 to
CO2 1.32 1.75 1.20 (nmol min31 (mg cell protein)31 ) when sulfur
Sul¢de 0 2.28 was present. Thus, if the reduction of sulfur itself
Amounts are expressed as mol per mol of glucose fermented. Data were associated with energy generation, it could be
from [61]. questioned for what purpose, since it did not in-
Stal, unpublished results). The utilization of sulfate acceptor in anaerobic dark metabolism in M. chtho-
and thiosulfate as electron acceptors in dark anaero- noplastes. They indeed showed that this organism
bic metabolism has been reported for the unicellular reduced DMSO to dimethylsul¢de (DMS) but were
cyanobacterium S. lividus Y52-s [97,98]. This organ- unable to associate this process with fermentative
ism reduces sulfate to sul¢de and thiosulfate to sul- metabolism. Unlike elemental sulfur the presence of
¢te and sul¢de while endogenous carbohydrate is DMSO did not alter the fermentation pattern. More-
oxidized to CO2 . Exogenous carbohydrates were over, as was the case with ferric iron, the rate of
not utilized. In the absence of CO2 , sulfate and thi- reduction was much too slow to be important as
osulfate were also reduced in the light. As far as we electron acceptor during fermentation. DMSO as
are aware, S. lividus is the only organism known with well as trimethylamine-N-oxide (TMAO) have been
this type of anaerobic metabolism, which could shown to serve as electron acceptors in anaerobic
Table 6
Cyanobacteria capable of sulfur reduction
Strain Origin Ref.
Oscillatoria limosa microbial mat, North Sea [63]
Microcoleus chthonoplastes microbial mat, North Sea [61]
Merismopedia punctata microbial mat, North Sea [100]
Chroococcus turgidus microbial mat, North Sea [100]
Anabaena variabilis microbial mat, North Sea [100]
Spirulina subsalsa microbial mat, North Sea [100]
Oscillatoria limnetica Solar Lake, Sinai [44]
Aphanothece halophytica saltern [44]
Microcystis aeruginosa freshwater lake, PCC7806 Moezelaar and Stal, unpublished
L.J. Stal, R. Moezelaar / FEMS Microbiology Reviews 21 (1997) 179^211 197
Table 7
q q
Glycogen degradation ( glucose ) and ATP production (expected when glycogen is totally fermented) ( ATP ) in cyanobacteria during fermen-
tation
the expense of a considerable amount of energy (2 energy yield of fermentation is so low that at best it
133
ATP (e ) ) (see Section 7). The fermentation ex- can sustain maintenance [60]. However, very little is
periments with O. limosa were carried out under an known about maintenance energy requirements in
atmosphere of either helium [59] or argon [63]. Un- cyanobacteria [106].
fortunately, no experiments were carried out under a In all cyanobacteria investigated thus far, degra-
nitrogen atmosphere, but the fact that acetylene re- dation of glycogen during fermentation occurs at low
duction occurred anaerobically in the dark in nitro- rates ranging from 0.2 to 1.7 nmol min
1
(mg cell
3
gen-¢xing cultures makes it likely that molecular ni- protein)
1 3
(Table 7). Such rates are very low com-
trogen (N2 ) will serve as electron sink under such pared to uptake rates of glucose that are required to
conditions. sustain growth during fermentation in other micro-
organisms. As shown for Enterococcus faecalis
grown in glucose-limited chemostats, the glucose up-
7. Energetics of fermentation in cyanobacteria take rate increases with the speci¢c growth rate from
80 nmol min
1 3
(mg cell protein)
1
at 0.1 h
1 3
to 550
3
7.1. Maintenance requirements in cyanobacteria nmol min
1 3
(mg cell protein)
1
at 0.5 h
1 3
[107]. So it
3
appears likely that fermentation of glycogen in cya-
Compared to aerobic respiration the energy yield nobacteria primarily serves maintenance purposes
of fermentation is low. In the light, cyanobacteria because it does not aim to sustain growth [62].
accumulate energy storage material endogenously This view is in accordance with the low speci¢c ac-
which is subsequently utilized in the dark. That tivities of the key enzymes of the fermentation me-
this process does not serve solely maintenance pur- tabolism that are found in cell-free extracts
poses was demonstrated by Post et al. [7] who [22,37,60,61,63]. Most of the fermentation experi-
showed that the cyanobacterium O. agardhii when ments have been conducted with resting cell suspen-
grown in continuous culture under a light-dark cycle sion in bu¡ers which would not allow growth. How-
was capable of maintaining its growth rate at the ever, in those cases where cells were incubated in
expense of endogenous carbohydrate during the complete medium, indeed no growth was detected
dark period. These authors provided evidence that [44,62].
the energy yield of aerobic respiration was su¤cient From the degradation rates of glycogen and the
to sustain growth at the same rate as in the light. pathways likely to be involved, the ATP production
Apart from this work, remarkably little has been during fermentation is estimated to be in the range
published about the energetics of dark metabolism of 0.8^8.5 nmol min
1 3
(mg cell protein)
1
(Table 7).
3
in cyanobacteria. In general it is assumed that the It must be emphasized, however, that these numbers
198 L.J. Stal, R. Moezelaar / FEMS Microbiology Reviews 21 (1997) 179^211
do not take into account that substrates other than During homolactic acid fermentation lactate is the
glycogen may be involved in fermentation as well. only fermentation product and also no CO2 is pro-
For instance, in O. limosa the osmoprotectant treha- duced. This means that the carbon recovery was only
lose is fermented as well [63] and the glucose part of 80%. For each molecule of glycogen-glucose that is
glucosyl-glycerol, the osmoprotectant of M. chthono- fermented to 2 molecules lactate 3 ATP are gener-
plastes is fermented when this organism contains low ated. Thus this fermentation would have resulted in
amounts of glycogen [61]. Moreover, Microcystis U
the formation of 2.4 mol of ATP (0.8 3) for each
PCC7806 [22], Nostoc strain Cc [62] and O. terebri- molecule of glycogen-glucose degraded. Assuming
formis [28] can also utilize exogenous glucose. that the carbon not recovered has been assimilated
Data on maintenance requirements of cyanobacte- in structural cell material (C-content is 50%) and
ria are scarce. Only for one organism, O. agardhii, that YATP equals 20 g biomass (mol ATP)31 , it
itor of protein synthesis, chloramphenicol, the culated for the other cyanobacteria. Whether the re-
amount of lactate produced per glucose metabolized duction of elemental sulfur is associated with energy
increased to 1.9 which was almost the amount that generation is still uncertain. The oxidation of glucose
would be expected when the glucose was completely through the OPP pathway does not yield any ATP
fermented to lactate. This also strongly indicated and therefore a role of sulfur solely as electron sink
that growth can occur during dark anaerobic incu- would represent a loss of energy.
quirement, also calculated that about 20% of poly- O. limosa is a non-heterocystous nitrogen-¢xing
glucose could have been assimilated into structural cyanobacterium. Heyer et al. [63] suggested that fer-
of biomass of only 3.3%. It is not correct not to tenance requirements, might support other metabolic
include the rate of maintenance energy requirement processes such as growth and nitrogen ¢xation. Stal
in these calculations because it is a substantial part and Heyer [105] have demonstrated that this organ-
of the energy generated under dark anoxic condi- ism was capable of dark anaerobic acetylene reduc-
tions. On the other hand a Y ATP of 20 is probably tion (nitrogenase activity) for 12^24 h at a rate of
Oren and Shilo [44] argued that it would not make transforms this rate of acetylene reduction to 1.45
They assumed that 3.5 ATP could be generated per trogen by nitrogenase requires 4 ATP for each pair
glucose oxidized which is only 0.5 more than in the of electrons involved (16 ATP per N ) [110]. This 2
case of lactate fermentation. In the presence of ele- means that the reduction of one molecule C H 2 2 to
mental sulfur the carbon recovery of dark anaerobic C H 2 4 (ethylene) would require 4 ATP (assuming the
metabolism in O. limnetica was 92%. Even with ele- same mechanism as for N 2 reduction). To support
mental sulfur present some lactate was produced. Per the observed rate of dark anaerobic acetylene reduc-
molecule of glucose 0.8 mol lactate and 6.2 mol sul- tion 5.8 nmol ATP min
31 (mg cell protein)
31 are
¢de are produced. In order to produce 6.2 mol sul- required. Fermentation of glycogen in nitrogen-¢x-
¢de 0.52 mol glucose must be oxidized. Add the 0.4 ing O. limosa yields 2.2 nmol ATP min
31 (mg cell
mol of the glucose could have been assimilated into ferments its osmoprotectant trehalose via the homo-
structural cell material. With 50% carbon content acetic pathway [63]. The homoacetic fermentation of
this would give an increase in structural cell material glucose results in a net yield of 4 ATP (Fig. 2). The
of 11.52 g and with a Y ATP of 20 g biomass (mol net yield of ATP produced during the formation of
ATP)
31 , this would cost 0.58 ATP. This could easily acetate from CO 2 is zero (Fig. 2). However, energy
be produced by lactate fermentation. The 0.4 mol from this reaction may be conserved electrochemi-
ATP. The speci¢c rate of glucose utilization is 1.7 sumably add another equivalent of ATP. Although
nmol min
31 (mg cell protein)
31 , of which 40% is only 8 Wmol (mg chlorophyll a)31 of the disaccharide
diverted to lactate fermentation. Assuming ATP gen- trehalose are degraded in 24 h, the high energy yield
eration exclusively through lactate fermentation the of homoacetate fermentation more than doubles the
ATP production is required for the assimilation of obviously not su¤cient to explain the observed rate
carbon into structural cell material. This leaves a of acetylene reduction. The possibility that qATP is
ci¢c rates of maintenance energy requirements seem the transport of acetic and lactic acid over the cyto-
very reasonable when compared with what was cal- plasmic membrane may generate metabolic energy
200 L.J. Stal, R. Moezelaar / FEMS Microbiology Reviews 21 (1997) 179^211
Table 8
[111]. If this possibility is considered we estimate a
Stoichiometry of glycogen degradation and product formation
qATP of 6.1. This would be su¤cient to support the
during fermentation in Microcystis PCC7806
CO 2 10.2 6.0
vated. When the organism was grown under an al- OD 750 0.8^1.0. Amounts of substrate and products are expressed
ternating light-dark (16-8 h) cycle the maximum in Wmol. C balance is the amount of carbon atoms ( Wmol) in the
much glycogen (3 Wmol glucose (mg cell protein) strates and products, divided by the sum of all reduced substrates
R) balance (1.03) [22], this was not the case in the amount of the substrate used or product formed. The O/R balance
by the amount of carbon atoms recovered in the produced some lactate which was not the case in the
products, times 100%. The carbon balance should light-dark grown cells. These di¡erences could not be
be 100% and a lower value indicates that products attributed to di¡erences in speci¢c activities of en-
may be missing. The O/R balance is the sum of all zymes involved in fermentation since these were
oxidized substrates and products, divided by the sum identical in both cultures and su¤cient to explain
of all reduced substrates and products. Each com- the highest rates of product formation. The rates
pound receives a redox number which indicates the of glycogen degradation in the light-dark and the
number of H atoms in the compound deviating from continuous light grown cultures were 0.4 and 0.9
water (which therefore has the redox number 0). Ex- nmol glucose min
31 (mg cell protein)
31 , respectively.
cess of H atoms gives a negative redox number, a In the culture of Microcystis PCC7806 grown
shortage is indicated by a positive sign. The redox under a light-dark regime the carbon recovery was
numbers are multiplied by the molar amount of the 86% and the O/R balance 1.03 [22] (Table 8). Assum-
substrate used or product formed. The O/R balance ing that the missing carbon had been converted into
should be 1. A greater value indicates a lack of re- cell material which of course would result in 100%
duced compounds. Furthermore the light-dark carbon recovery, the O/R balance becomes 0.99. Re-
grown culture produced much more ethanol relative assimilation of carbon from glycogen could proceed
to acetate as compared to the culture grown in con- via acetyl-CoA [1] which might explain the relative
tinuous light. The latter produced approximately low amount of acetate produced by this culture. Cell
equimolar amounts of ethanol and acetate. In addi- material is slightly reduced and a redox number of
L.J. Stal, R. Moezelaar / FEMS Microbiology Reviews 21 (1997) 179^211 201
growth phase contained signi¢cantly larger amounts ture also showed a larger amount of acetate formed
(2 Wmol glucose (mg cell protein)31 ) [61]. This huge than expected on the basis of the fermentation path-
di¡erence in glycogen content had only a moderately way. Moezelaar et al. [61] supposed that a homo-
e¡ect on the speci¢c rate of glucose fermentation. acetic fermentation pathway existed in M. chthono-
This rate was 0.40 nmol glucose min31 (mg cell plastes in addition to the mixed acid fermentation.
protein)31 in the stationary phase cells and 0.33 However, attempts to detect the key enzymes of the
nmol glucose min31 (mg cell protein)31 in the expo- homoacetic pathway failed [61]. Moreover, the as-
nentially growing cells. This was partly caused by the sumption of the presence of homoacetic fermentation
fact that the low glycogen containing cells also de- improved the O/R balance not su¤ciently (the O/R
graded the osmoprotectant glucosyl-glycerol. Only balance decreased from 1.51 to 1.22). In order to
the glucose of this compound was utilized and glyc- explain these high O/R balances of fermentation in
erol was excreted into the medium. The degradation M. chthonoplastes Moezelaar et al. [61] assumed that
of glucosyl-glycerol contributed 0.12 nmol glucose ferric iron could have served as electron acceptor.
min31 (mg cell protein)31 to the rate of glucose fer- They conceived that part of the formic acid is oxi-
mentation, leaving 0.21 nmol glucose min31 (mg cell dized to CO2 by ferric iron according to the follow-
protein)31 for the degradation of glycogen. This is ing equation [115]:
about half the rate of glycogen degradation of the
stationary phase cultures. The latter cultures did not HCOO3 2Fe3 !CO2 H 2Fe2
2
degrade the osmoprotectant glucosyl-glycerol. In
fact, the glycogen content of stationary phase cul- M. chthonoplastes was grown with an elevated
tures and the rate with which it is decomposed would amount of ferric-citrate in the medium because it
allow the organism to continue for 3.5 days. We resulted in homogeneous growth of this organism
have indeed observed that M. chthonoplastes
sur- [61]. Similarly, the reduction of ferric iron could
vived 4^5 days of incubation under dark anoxic con- also (in part) explain the high O/R balance of 1.30
ditions before it started to lyse. Due to rather similar in the case of fermentation in the presence of ele-
q q
glucose in both cultures the ATP were also quite com- mental sulfur [61]. With elemental sulfur present a
parable in both cultures: 1.65 and 1.32 nmol min31 reduction to sul¢de will take place. However, sul¢de
(mg cell protein)31 in the stationary and exponential will be oxidized back to elemental sulfur by ferric
phase cultures, respectively. iron [115] (see equation on p. 23). Thus, the amount
The fermentation patterns showed good carbon of sul¢de formed will be underestimated.
recoveries but rather poor O/R balances of 1.55 Recently, we have investigated the possibility of
and 1.22 in the exponential and stationary phase ferric iron reduction by cultures of M. chthono-
cultures, respectively [61]. The stationary phase cul- plastes. It was shown that Eq. 2 was indeed carried
L.J. Stal, R. Moezelaar/FEMS Microbiology Reviews 21 (1997) 179^211 203
out by this cyanobacterium [76]. However, the rates culture because of the much higher production of
at which it occurred were far from su¤cient to serve formate in that culture. Iron reduction in M. chtho-
as an important electron acceptor in fermentation noplastes has a rather low a¤nity for formate.
and taking iron reduction into account would have The ATP yield of fermentation in M. chthono-
only a minor in£uence on the O/R balance of fer- plastes can be calculated as follows. For every glu-
mentation in M. chthonoplastes. cose degraded 3 ATP are formed and 1 additional
In the light of what has been calculated for Micro- for each acetate produced. We calculated the amount
cystis PCC7806 it may be hypothesized that also in of glucose degraded as half of the sum of the
M. chthonoplastes some re-assimilation of CO2 could amounts of ethanol, acetate and lactate formed.
have take place. According to the proven fermenta- This gives 28.8 and 84.8 Wmol ATP for the low
tion pathway in this organism [61] the amount of and high glycogen containing cultures, respectively.
Table 10
Stoichiometry of fermentation of endogenous glucose (glycogen and glucosyl-glycerol) in an exponentially growing (low glycogen) culture
of the cyanobacterium Microcoleus chthonoplastes
Compound Wmol Wmol C Redox number Redox value
Glucose 7.1 42.6 0 0
Ethanol 7.4 14.8 34 329.6
Acetate 7.1 14.2 0 0
Formate 5.1 5.1 +2 +10.2
H2 0.6 0 32 31.2
CO2 5 5 +4 +20
Cell carbon 4.4 4.4 30.37 31.6
43.5/42.6 +30.2/332.4
Balance 102% 0.93
The numbers in italics are calculated (see text), the other amounts were measured [61]. Incubation 24 h, total biomass 15 mg protein.
204 L.J. Stal, R. Moezelaar/FEMS Microbiology Reviews 21 (1997) 179^211
Table 11
Stoichiometry of fermentation of endogenous glucose (glycogen) in a stationary phase (high glycogen) culture of the cyanobacterium Mi-
crocoleus chthonoplastes
Compound Wmol Wmol C Redox number Redox value
Glucose 20 120 0 0
Ethanol 17.6 35.2 34 370.4
Acetate 22.9 45.8 0 0
Formate 25.9 25.9 +2 +51.8
H2 1.4 0 32 32.8
CO2 8 8 +4 +32
Cell carbon 6.6 6.6 30.37 32.4
Lactate 0.8 2.4 0 0
3
The numbers in italics are calculated (see text), the other amounts were measured [61]. Incubation 24 h, total biomass 35 mg protein.
erol. Apparently, a faster growth was not possible. The limited rate of glycogen degradation in M.
Although the fermentation experiments were carried chthonoplastes may serve an important ecological
out in a nutrient-free bu¡er, it can be assumed that goal. It has been shown that this organism can sur-
su¤cient nutrients for growth must have been vive 4^5 days under anoxic conditions in the dark. In
present in the cells or as contaminants in the bu¡er. microbial mats, the environment in which M. chtho-
Growth of cyanobacteria under anaerobic conditions noplastes occurs anoxic dark conditions may persist
is not trivial. For instance, notwithstanding the fact for prolonged periods of time, particularly during
that M. chthonoplastes can perform sul¢de-depend- periods of increased rates of deposition. The impor-
ent anoxygenic photosynthesis and fermentation it is tance of a low rate of glycogen degradation can be
not capable of growth in the complete absence of exempli¢ed by the case of O. terebriformis
. Under
oxygen. Oxygen appears to be an essential nutrient aerobic conditions in the dark this organism depletes
for this organism [116]. On the other hand the activ- its energy storage quickly after which it dies. How-
ity of certain enzymes may have limited faster deg- ever, under anoxic conditions glycogen is degraded
radation of glycogen, although the measured enzyme much slower, allowing the organism to survive the
activities of the mixed acid fermentation in M. chtho- night period [28]. In fact, in order to prevent aerobic
noplastes were su¤cient to explain the rates of prod- (and fast) degradation of glycogen this organism
uct formation. The formation of lactate in the high moves into the anoxic part of the sediment during
glycogen containing culture hinted to an over£ow the dark [117].
metabolism caused by high intracellular concentra-
tions of fructose-1,6-bisphosphate and/or pyruvate
[75]. Relative to acetate the low production of etha- 8. Concluding remarks
nol in this culture may be explained by the low spe-
ci¢c activity of alcohol dehydrogenase relative to Most of the research on cyanobacteria concen-
acetate kinase [61]. Whatever caused the limited trates on their photoautotrophic mode of life.
rate of glycogen degradation it is likely to be respon- This, however, does not give credit to the fact
sible for the higher rest (maintenance) rate of ATP that these organisms are frequently faced with sit-
production of 1.39 nmol min31 (mg cell protein)31 . uations in which light is not available. This is not
The rest (maintenance) rate of the low glycogen con- only the case during the night but also during the
taining culture is with 0.88 slightly higher than the daytime cyanobacteria may be deprived of light and
one derived for Microcystis
. The fact that this cul- some symbiotic species live permanently in the
ture degrades part of its osmoticum glucosyl-glycerol dark. In order to survive short periods of darkness
may cost the organism some additional energy in cyanobacteria use endogenous carbohydrate (glyco-
order to maintain osmotic equilibrium [67]. gen) which is synthesized and stored in the light.
L.J. Stal, R. Moezelaar / FEMS Microbiology Reviews 21 (1997) 179^211 205
Glycogen is mobilized via the OPP pathway and thesis does not prevent fermentation. The constitu-
under aerobic conditions respiration may yield suf- tive property of fermentation has the advantage for
¢cient energy to allow growth. A few species are the organism that it can react immediately when an-
even capable of taking up a limited number of or- oxic conditions are established, which may occur
ganic compounds (mainly glucose, fructose and su- within minutes in some environments. On the other
crose) and grow chemoorganotrophically in the hand it can be asked how fermentation is regulated.
dark. Very little work has been done on the chemo- In O. limnetica the inhibition of aerobic respiration
organotrophic metabolism of cyanobacteria under by cyanide was su¤cient to start fermentation and in
anoxic conditions. Cyanobacteria exposed in their symbiotic Nostoc sp. fermentation did not even re-
natural environment to anoxic dark conditions pos- quire completely anoxic conditions and started at
sess the capacity to ferment endogenous storage low levels of oxygen. Thus neither light nor oxygen
in which qE is the biomass-speci¢c light energy up- ATP being formed for every 3 H . Thus, 1 mol of
take (h
31 ) : ATP is formed per 3 mol of light quanta absorbed:
dE
xATP 13.
qE x1
W
dt
A3 Substituting the above values in Eq. A5 gives:
For the lower speci¢c growth rates a plot of Wg ver- qmATP 2 01900410225 160
: W :
W
1
3
sus qE results in a straight line with slope c. The
: U W
intercept with the abscissa corresponds to the speci¢c 2U1039 mol ATP min31
mg dry weight31
light energy uptake required for maintenance, qm E,
and extrapolation to the ordinate provides an esti- Since the protein content of biomass is 55% [6], this
3
mate for Wm . The relation between qm E and the cor- value corresponds to a qm ATP of approximately 4
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