2012-Breast Cancer and Protein Biomarkers
2012-Breast Cancer and Protein Biomarkers
Experimental Medicine
Online Submissions: http://www.wjgnet.com/esps/ World J Exp Med 2012 October 20; 2(5): 86-91
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EDITORIAL
Lay-Harn Gam
especially in asymptomatic people with high risk of de- of both sensitivity and specificity as a marker for early
veloping cancer[12]. stage disease. However, its specificity can be improved
In terms of the usage of biomarkers, cancer bio- by combining CA-125 with various forms of sonogra-
markers can be divided into three main categories, phy[14]. Changes in serum protein levels may also indicate
namely diagnostic, prognostic and predictive biomarkers. the response of patients to chemotherapy in HER2-
A diagnostic marker is used to detect the presence of the positive breast cancer patients, where a few serum based
disease. A prognostic marker is used after the establish- proteins, namely alpha-2-macroglobulin, complement 3,
ment of the disease status to predict the course of the hemopexin and serum amyloid P, can be used as indica-
disease and its recurrence and can be used to indicate the tors for patients’ positive response to chemotherapy[25].
aggressiveness of the tumor. A predictive marker is used Prediction of patients’ response to drugs is important
to predict the likely response of a patient to a drug prior for effective cancer treatment. Recently, many predictive
to a treatment so that patients are classified as “respond- biomarkers have been suggested for different types of
er” or “nonresponder” by the presence or absence of the drug treatment. Estrogen receptor (ER) and proges-
marker. Such a prediction is important in designing clini- terone receptor are useful indicators for prediction of
cal drug trials to define the intended use of the drug[14]. breast cancer patients’ responses to hormonal therapy
in an adjuvant setting and metastatic disease. Heat shock
protein 70 showed significant positive correlation for the
CURRENTLY AVAILABLE BREAST usage of aromatase inhibitors in hormonal therapy[26]. As
CANCER BIOMARKERS for ER-positive breast cancer, truncated BH3 interacting
There are a few potential serum based biomarkers for domain death agonist[27] and 14-3-3 proteins, including
breast cancer. Nevertheless, only two of the serum based theta/tau, gamma, epsilon, beta/alpha and seta/delta
biomarkers were approved by the Food and Drug Ad- isoforms, can be used as indicators for patients’ re-
ministration (FDA) for monitoring and treatment of the sponses to neoadjuvant chemotherapy[28]. In the event of
advanced or recurrence breast cancer, MUC-1 (CA27.29 triple-negative breast cancer, defined by lack of expres-
and CA15-3) and carcinoembryonic antigen[15,16]. sion of estrogen, progesterone and human epidermal
MUC-1 mucins belong to a protein family secreted growth factor receptor 2 (HER-2), heat shock protein 90
by the luminal surface of glandular epithelia. The up- has been identified as a critical target for its treatment[29].
regulation of MUC-1 mucin was detected in breast can- On the other hand, FKBP4 and S100A9 were suggested
cer patients, particularly in patients’ serum[17,18]. Family as putative prediction markers in discriminating doxo-
members of MUC-1-gene include MCA, BRMA CA549, rubicin and docetaxel drug sensitive patients from drug
CA27.29 and CA15-3. Among which, CA15-3 is reliable resistant patients[30], while Hsp27 was said to indicate
in indicating the clinical course of patients with meta- doxorubicin resistance[31]. The response of patients to
static cancer. The serum level of CA15-3 corresponds neoadjuvant paclitaxel/radiation treatment can be evalu-
to the tumor size. Although CA27.29 was found to be ated by the overexpression of alpha-defensins and mi-
more sensitive than CA15-3, it was less specific than crotubule associated protein 2 to indicate a pathological
CA15-3[19]. complete response. In addition, the presence of alpha-
Carcinoembryonic antigen (CEA) is a glycoprotein defensins and MAP2 were also used to indicate patients’
presence in the serum of cancer patients and can be de- sensitivity to taxane-based treatment[32].
tected using radioimmunoassay or enzyme-linked immu- Prognostic biomarkers provide information regarding
nosorbent assay[20]. CEA does not serve as a good indica- outcome irrespective of therapy. Amongst the potential
tor for metastatic breast cancer as the CEA serum level prognostic biomarkers for breast cancer are Ki-67 for a
was found elevated in only 15% to 68% of patients[21]. In primary tumor, cyclins, urokinase plasminogen activator,
addition, a high false-positive rate was detected among p53, p21, pro- and anti-apoptotic factors, BRCA1 and
the normal population, where a false positive rate rang- BRCA2[33-35].
ing from 10% to 27% was reported[20], limiting its clinical The discovery of the HER-2/neu oncogene has led
applications. The main clinical application of CEA is for to the formulation of an anti-cancer drug for patients
gastrointestinal cancers, specifically in colorectal malig- with breast cancer[36]. HER-2 belongs to the type I trans-
nancy. It is a very useful marker for the early detection membrane tyrosine kinase receptor family. HER-2 is
of liver metastasis in patients diagnosed with colorectal an important regulator for cell growth, differentiation
cancer[22]. during embryogenesis and for mammary development
Another potential serum based marker is CA-125, a during puberty. Deregulation of HER-2 signaling in
useful serum marker for monitoring ovarian cancer and mammary cells promotes breast tumorigenesis[37]. Ap-
predicting the patient’s response to therapy. Neverthe- proximately 25% to 30% of human metastatic breast
less, CA-125 had insufficient sensitivity for diagnosis cancers over-expressed HER-2[38]. Overexpression of
of the disease[23]. In addition, serum CA-125 has been HER-2 is a significant predictor of reduced survival and
shown to be elevated in various forms of cancer, includ- shorter time to relapse[39,40]. This is because these tumors
ing ovarian, pancreatic, breast, colon, lung and endo- tend to grow faster and are more likely to metastasize
metrial carcinoma, making it less specific to any type of than tumors that do not overexpress HER-2. Thus,
cancer[24]. It is commonly agreed that CA-125 has a lack HER-2 has become an important therapeutic target for
this subtype of breast cancer. When breast cancer is revealed 57 differentially expressed proteins between
diagnosed, HER-2 status is routinely assessed by either normal and cancerous tissues, including VDAC, transge-
immunohistochemical analysis for HER-2 expression or lin, Hsp 27, GRP78 and cathepsin. Following this study,
fluorescent in situ hybridization analysis for HER-2 gene Somiari et al[45] reported the identification of annexin Ⅴ,
copy[41]. Two HER-2-targeted therapies are approved by HSP 90, carbonic dehydrase, protein disulfide isomerase,
the United States FDA for treatment of HER2-overex- gelsolin and fibrinogen beta chain. Luo et al[53] added
pressing metastatic breast cancer, namely Trastuzumab to the list of differentially expressed proteins, includ-
(Herceptin) and Lapatinib (Tykerb). The presence of ing manganese SOD, biliverdin reductase B, carbonic
HER-2 overexpression is a predictive factor that may anhydrase Ⅰ and annexin Ⅰ, binding protein 4, cofilin
indicate successful use of trastuzumab (Herceptin)[40]. 1, profiling 1 and uracil DNA glycosylase. On the other
Trastuzumab (Herceptin) is a recombinant humanized hand, Deng et al[54] reported the potential of alpha-1-
monoclonal antibody targeted against the extracellular antitrypsin, EF-1-beta, cathepsin D, translationally con-
HER-2 receptor. The initial clinical trials of trastuzumab trolled tumour protein, SMT3A and PSMA1 as candi-
to be used as a sole agent in HER-2-overexpressing date biomarkers for patients with breast cancer. Besides
metastatic breast cancer demonstrated a response rate these studies, there are many recent reports on the iden-
ranging from 12% to 34% for a median duration of 9 tification of biomarkers in breast cancer[26-30]. Although
months[42]. the potential use of most reported biomarkers for breast
Early detection of breast cancer increases the sur- cancer has been scientifically proven, they need to be
vival rate of patients[43]. However, early symptoms of clinically validated.
breast cancer are sometimes absent or not recognized.
It is often detected in the advanced stage and is untreat-
able when the cancer is diagnosed[16]. Thus, a reliable HETEROGENEITY BETWEEN PATIENTS
biomarker is needed to rule out breast cancer in the early It is a challenge to identify a common biomarker that fits
state. Unfortunately, currently available tumor markers all patients. Many different factors are involved in the
lack the specificity and sensitivity to be used in early de- development of cancer. They include age, race, family
tection of breast cancer[13,16]. history, personal history of cancer, presence of viruses,
mutations in cell regulation genes and tumor suppressing
genes, exposure to carcinogens, lack of physical activity
PROTEOMIC APPROACH FOR and diet[55,56]. All these factors will cause heterogene-
BIOMARKER IDENTIFICATION ity in protein expression between patients. Therefore,
individualized medicine has become a popular trend for
Protein profiling studies on different types of cancer
treating cancer in Western countries. Nevertheless, in
have been carried out by researchers throughout the
developing countries, such a treatment will be too ex-
world. The 2D-PAGE coupled with mass spectrometry,
pensive for most patients. In the author’s laboratory, we
isotope coded affinity tags, multidimensional protein
have received surgically removed tissues from patients
identification technology, protein array technology and
with breast and colon cancer. In general, Malaysia is a
surface enhanced laser-desorption ionization-time of
country populated by three main ethnic groups, namely
flight are among the common technologies applied in
Malays, Chinese and Indian. Although the environment
proteomic study[44-46]. The proteome of a cell contains
and lifestyle factors are relatively similar between the eth-
all of the gene products that represent the functional
nic groups, they originated from different parts of the
output of the cell[47]. This makes proteomics a promising
world, with the Malays and Chinese mainly from China-
tool for characterizing cells and tissues of interest and
Mongolia regions and the Indians mainly from south In-
for biomarker discovery[48].
dia. We have shown in our studies[47] that the Malays and
It has been estimated that only 2% of human diseases
Chinese have relatively similar protein profiles, while In-
result from single gene defects. As for the remaining 98%
dians are very different. Therefore, the usability of each
of human diseases, epigenetic and environment factors
protein biomarker to be commonly used for a cancer per
need to be considered as they affect both etiology and
se among Malaysian patients was not reliable, but when
severity of the disease[49]. Therefore, cancer biomarker
an ethnic-specific biomarker was identified for each
discovery targeting protein expressions has become pop-
ethnic group, their significance greatly increased. Con-
ular as proteomic approaches characterize both modified
sequently, we have suggested the possibility of ethnic
and unmodified proteins involved in cancer progression.
specific drug-targeted therapy, which may be more af-
In recent years, the emerging sciences of genomics and
fordable to patients from developing or under developed
proteomics have revealed the identity of proteins that
countries where health insurance is not well established.
can potentially serve as cancer biomarkers. Unfortu-
nately, very few of these biomarkers are reliable clinically
for prognosis or diagnosis of the disease and even fewer CHALLENGES FOR IDENTIFICATION OF
have been validated and approved for clinical usage[50,51].
The proteomics of normal breast and cancerous tis- BIOMARKERS FOR CANCER
sue was first reported by Wulfkuhle et al[52]. The authors A few criteria are required for biomarkers to be effec-
tively used in diagnosis, prognosis or treatment of can- to be tagged on a specific antibody that recognizes the
cer. First is the specificity of the biomarker to a type of biomarker on the cancer cell. In order to be used as a
cancer and such biomarker should be uniquely expressed biomarker in drug targeted therapy, the biomarker is best
in cancerous tissues only. Furthermore, consistent ex- to be uniquely expressed on the tumor surface at high
pression of the protein biomarker in cancer patients will abundant quantity for easy recognition and access of the
surely increase its reliability as an indicator of the dis- drugs. Although such biomarkers may not exist, there
ease. Moreover, the abundant expression of the protein are abundantly expressed common proteins on the tu-
biomarker will ease its detection or its recognition as a mor surface that are differentially expressed, where their
target for treatment. expression levels were found much higher in cancerous
In the author’s experience of researching the po- tissues than normal tissues. These differentially ex-
tential biomarkers for cancer, none of the proteins met pressed abundant proteins on the surface of cancerous
the criteria of biomarkers in terms of consistent and tissues may serve as a good target for recognition when
unique expression in all cancer patients. Instead, we have its abundance is much higher than that of the normal
detected many common proteins between normal and tissues.
cancerous tissues that were differentially expressed[57],
indicating that the similar types of cell activities were
operating between normal and cancerous cells while the POSSIBLE SOLUTION BY COLLECTIVE
rate of operation differs between the two tissues; cancer USE OF BIOMARKERS
cell activities repeat more frequently than normal cells,
The use of an individual protein as the sole biomarker
which causes a rapid cell growth that leads to tumor for-
for diagnosis, prognosis or treatment for cancer no
mation. There may be uniquely expressed protein in can-
doubt simplifies the procedure. However, it has been
cerous tissue but such proteins may express themselves
shown in many studies that protein expression variation
in low quantities, making them not a suitable biomarker
between patients is the main halting factor of the devel-
for drug-targeted therapy.
opment of devices as the cost of such development is
tremendously high; however, its usability is limited to a
CHALLENGES FOR IDENTIFICATION OF small group of patients. One of the possible solutions
is the collective use of biomarkers to achieve the desired
BIOMARKERS FOR DRUG-TARGETED goal. Through principle component analysis and linear
THERAPY IN CANCER TREATMENT discriminant analysis statistical analysis, we have shown
previously[58] that the collective use of biomarkers in can-
Currently, most of the drugs used in chemotherapy are cer has tremendously increased the correct identification
non-targeted, leading to two consequences. Firstly, the of cancerous tissues. The combined use of biomarkers
quantity of drug used in treatment was generally more has also been shown to give a better prognosis and in-
than that required to fight cancer because the drug will crease sensitivity and specificity to predict the response
be circulated in the body without a precise target, leading of patients to chemotherapeutic agents[33]. This will also
to the second consequence, the side-effects of the drug reduce the possibility of a false diagnosis as the reliabil-
on patients who undergo chemotherapy treatment. The ity of a group of biomarkers is better than the sole use
solution to this problem is drug-targeted therapy, where of a single biomarker.
the drug will be targeted at the side of tumor so that the
amount of drug used can be reduced and therefore the
side-effect of chemo treatment can also be minimized. REFERENCES
The key answer for drug-targeted therapy is the target 1 Vercoutter-Edouart AS, Lemoine J, Le Bourhis X, Louis H,
itself, which should recognize the tumor and direct the Boilly B, Nurcombe V, Révillion F, Peyrat JP, Hondermarck
drug to itself. Such a target must not be hidden and, at H. Proteomic analysis reveals that 14-3-3sigma is down-
the same time, it must be easily accessible to drugs. regulated in human breast cancer cells. Cancer Res 2001; 61:
76-80
To date, there are many reports on the potential bio- 2 Somiari SB, Shriver CD, He J, Parikh K, Jordan R, Hooke
markers for various types of cancer. Nevertheless, many J, Hu H, Deyarmin B, Lubert S, Malicki L, Heckman C,
projects seem to stop at the biomarker identification Somiari RI. Global search for chromosomal abnormalities
stage, which may be due to lack of funding or insuf- in infiltrating ductal carcinoma of the breast using array-
ficient facilities to carry out the subsequent research. comparative genomic hybridization. Cancer Genet Cytogenet
2004; 155: 108-118
Moreover, innovation of targeted drug therapy is a 3 Cornelisse CJ. Genes and cancer. Medicamundi 2003; 47:
lengthy process which could possibly take many years 28-33
of continual research. Multi-factorial aspects on the 4 King RJB. Cancer Biology. Harlow: Longman Pub Group,
safety use of the drugs also need to be examined. Such 1996
innovation requires large funding, while the revenue is 5 Hulka BS, Moorman PG. Breast cancer: hormones and other
risk factors. Maturitas 2001; 38: 103-113; discussion 113-116
hardly guaranteed as many of the drugs are eliminated 6 Hanahan D, Weinberg RA. Hallmarks of cancer: the next
even before reaching the second or third stage of a clini- generation. Cell 2011; 144: 646-674
cal trial. In drug targeted therapy, the drug of interest is 7 Soreide K, Janssen EA, Körner H, Baak JP. Trypsin in
colorectal cancer: molecular biological mechanisms of prolif- sell C, Long ED, Fox JN, McManus PL, Mahapatra TK, Knee-
eration, invasion, and metastasis. J Pathol 2006; 209: 147-156 shaw PJ, Drew PJ, Lind MJ, Cawkwell L. Proteomic identifi-
8 Srinivas PR, Kramer BS, Srivastava S. Trends in biomarker cation of predictive biomarkers of resistance to neoadjuvant
research for cancer detection. Lancet Oncol 2001; 2: 698-704 chemotherapy in luminal breast cancer: a possible role for
9 Srinivas PR, Verma M, Zhao Y, Srivastava S. Proteomics for 14-3-3 theta/tau and tBID? J Proteomics 2012; 75: 1276-1283
cancer biomarker discovery. Clin Chem 2002; 48: 1160-1169 28 Hodgkinson VC, Agarwal V, ELFadl D, Fox JN, McManus
10 National Cancer Institute: Breast Cancer. Available from: PL, Mahapatra TK, Kneeshaw PJ, Drew PJ, Lind MJ, Cawk-
URL: http: //www.cancer.gov/cancertopics/types/breast well L. Pilot and feasibility study: comparative proteomic
11 Fabian C. Surrogates are just surrogates, but helpful just the analysis by 2-DE MALDI TOF/TOF MS reveals 14-3-3 pro-
same. Breast Cancer Res 2007; 9: S18 teins as putative biomarkers of response to neoadjuvant che-
12 Kelly WK, Curley T, Slovin S, Heller G, McCaffrey J, Bajorin motherapy in ER-positive breast cancer. J Proteomics 2012;
D, Ciolino A, Regan K, Schwartz M, Kantoff P, George D, 75: 2745-2752
Oh W, Smith M, Kaufman D, Small EJ, Schwartz L, Larson 29 Caldas-Lopes E, Cerchietti L, Ahn JH, Clement CC, Robles
S, Tong W, Scher H. Paclitaxel, estramustine phosphate, and AI, Rodina A, Moulick K, Taldone T, Gozman A, Guo Y,
carboplatin in patients with advanced prostate cancer. J Clin Wu N, de Stanchina E, White J, Gross SS, Ma Y, Varticovski
Oncol 2001; 19: 44-53 L, Melnick A, Chiosis G. Hsp90 inhibitor PU-H71, a multi-
13 D’Arcy V, Abdullaev ZK, Pore N, Docquier F, Torrano V, modal inhibitor of malignancy, induces complete responses
Chernukhin I, Smart M, Farrar D, Metodiev M, Fernandez N, in triple-negative breast cancer models. Proc Natl Acad Sci U
Richard C, Delgado MD, Lobanenkov V, Klenova E. The po- S A 2009; 106: 8368-8373
tential of BORIS detected in the leukocytes of breast cancer 30 Yang WS, Moon HG, Kim HS, Choi EJ, Yu MH, Noh DY,
patients as an early marker of tumorigenesis. Clin Cancer Res Lee C. Proteomic approach reveals FKBP4 and S100A9 as
2006; 12: 5978-5986 potential prediction markers of therapeutic response to
14 Hamdan M. Cancer Biomarkers: Analytical Techniques for neoadjuvant chemotherapy in patients with breast cancer. J
Discovery. New York City, NY: Wiley-Interscience, 2007 Proteome Res 2012; 11: 1078-1088
15 Chan AK, Lockhart DC, von Bernstorff W, Spanjaard RA, 31 Zhang D, Putti TC. Over-expression of ERp29 attenuates
Joo HG, Eberlein TJ, Goedegebuure PS. Soluble MUC1 se- doxorubicin-induced cell apoptosis through up-regulation
creted by human epithelial cancer cells mediates immune of Hsp27 in breast cancer cells. Exp Cell Res 2010; 316:
suppression by blocking T-cell activation. Int J Cancer 1999; 3522-3531
82: 721-726 32 Bauer JA, Chakravarthy AB, Rosenbluth JM, Mi D, Seeley
16 Kirmiz C, Li B, An HJ, Clowers BH, Chew HK, Lam KS, EH, De Matos Granja-Ingram N, Olivares MG, Kelley MC,
Ferrige A, Alecio R, Borowsky AD, Sulaimon S, Lebrilla CB, Mayer IA, Meszoely IM, Means-Powell JA, Johnson KN,
Miyamoto S. A serum glycomics approach to breast cancer Tsai CJ, Ayers GD, Sanders ME, Schneider RJ, Formenti
biomarkers. Mol Cell Proteomics 2007; 6: 43-55 SC, Caprioli RM, Pietenpol JA. Identification of markers of
17 Gendler SJ, Spicer AP, Lalani EN, Duhig T, Peat N, Burchell taxane sensitivity using proteomic and genomic analyses
J, Pemberton L, Boshell M, Taylor-Papadimitriou J. Structure of breast tumors from patients receiving neoadjuvant pacli-
and biology of a carcinoma-associated mucin, MUC1. Am taxel and radiation. Clin Cancer Res 2010; 16: 681-690
Rev Respir Dis 1991; 144: S42-S47 33 Sarkar S, Mandal M. Growth factor receptors and apoptosis
18 Graves R, Hilgers J, Fritsche H, Hayes D, Robertson JFR. regulators: signaling pathways, prognosis, chemosensitiv-
MUC-1 mucin assays for monitoring therapy in metastatic ity and treatment outcomes of breast cancer. Breast Cancer
breast cancer. Breast 1998; 7: 181-186 (Auckl) 2009; 3: 47-60
19 Eleftherios PD. Tumor Markers: Physiology, Pathobiology, 34 Koda M, Jarzabek K, Kańczugakoda L, Przystupa W, To-
Technology and Clinical Applications. Washington, DC: maszewski J, Sulkowska M, Wołczyński S, Sulkowski S.
AACC Press, 2002 [Comparative studies of K1-67 expression between the
20 Stout RL, Fulks M, Dolan VF, Magee ME, Suarez L. In- primary tumor and breast cancer metastases to regional
creased mortality associated with elevated carcinoembry- lymph nodes]. Ginekol Pol 2003; 74: 754-760
onic antigen in insurance applicants. J Insur Med 2007; 39: 35 Du J, Du Q, Zhang Y, Sajdik C, Ruan Y, Tian XX, Fang WG.
251-258 Expression of cell-cycle regulatory proteins BUBR1, MAD2,
21 Hayes DF, Kaplan WD. Evaluation of patients following Aurora A, cyclin A and cyclin E in invasive ductal breast
primary therapy. In: Harris JR, Helliman S, Handerson IC, carcinomas. Histol Histopathol 2011; 26: 761-768
Kinne DW, editors. Breast Disease. Philadelphia: JB Lippin- 36 Clark GM. Interpreting and integrating risk factors for pa-
cott, 1991 tients with primary breast cancer. J Natl Cancer Inst Monogr
22 Duffy MJ. Carcinoembryonic antigen as a marker for 2001: 17-21
colorectal cancer: is it clinically useful? Clin Chem 2001; 47: 37 Personalizing HER2-targeted therapy in metastatic breast
624-630 cancer beyond HER2 status: what we have learned from
23 Bast RC. Status of tumor markers in ovarian cancer screen- clinical specimens. Curr Pharmacogenomics Person Med 2009; 7:
ing. J Clin Oncol 2003; 21: 200s-205s 263-274
24 Bast RC, Xu FJ, Yu YH, Barnhill S, Zhang Z, Mills GB. CA 38 Lipton A. Hormonal influences on oncogenesis and growth
125: the past and the future. Int J Biol Markers 1998; 13: of breast cancer. In: Roses DF, editor. Breast Cancer. New
179-187 York City, NY: Elsevier, 2005
25 Mazouni C, Baggerly K, Hawke D, Tsavachidis S, André F, 39 Slamon DJ, Clark GM, Wong SG, Levin WJ, Ullrich A, Mc-
Buzdar AU, Martin PM, Kobayashi R, Pusztai L. Evaluation Guire WL. Human breast cancer: correlation of relapse and
of changes in serum protein profiles during neoadjuvant survival with amplification of the HER-2/neu oncogene.
chemotherapy in HER2-positive breast cancer using an LC- Science 1987; 235: 177-182
MALDI-TOF/MS procedure. Proteomics 2010; 10: 3525-3532 40 Huston TL, Osborne MP. Evaluating and staging the patient
26 Yiu CC, Sasano H, Ono K, Chow LW. Changes in protein with breast cancer. In: Roses DF, editor. Breast Cancer. New
expression after neoadjuvant use of aromatase inhibitors in York City, NY: Elsevier, 2005
primary breast cancer: a proteomic approach to search for 41 Sauter G, Lee J, Bartlett JM, Slamon DJ, Press MF. Guide-
potential biomarkers to predict response or resistance. Ex- lines for human epidermal growth factor receptor 2 testing:
pert Opin Investig Drugs 2010; 19 Suppl 1: S79-S89 biologic and methodologic considerations. J Clin Oncol 2009;
27 Hodgkinson VC, ELFadl D, Agarwal V, Garimella V, Rus- 27: 1323-1333
42 Vogel CL, Cobleigh MA, Tripathy D, Gutheil JC, Harris markers for targeted proteomics. Biomark Insights 2007; 1:
LN, Fehrenbacher L, Slamon DJ, Murphy M, Novotny WF, 1-48
Burchmore M, Shak S, Stewart SJ, Press M. Efficacy and 52 Wulfkuhle JD, Sgroi DC, Krutzsch H, McLean K, McGar-
safety of trastuzumab as a single agent in first-line treatment vey K, Knowlton M, Chen S, Shu H, Sahin A, Kurek R,
of HER2-overexpressing metastatic breast cancer. J Clin On- Wallwiener D, Merino MJ, Petricoin EF, Zhao Y, Steeg PS.
col 2002; 20: 719-726 Proteomics of human breast ductal carcinoma in situ. Cancer
43 Levenson VV. Biomarkers for early detection of breast Res 2002; 62: 6740-6749
cancer: what, when, and where? Biochim Biophys Acta 2007; 53 Luo Y, Zhang J, Liu Y, Shaw AC, Wang X, Wu S, Zeng X,
1770: 847-856 Chen J, Gao Y, Zheng D. Comparative proteome analysis
44 Dwek MV, Rawlings SL. Current perspectives in cancer of breast cancer and normal breast. Mol Biotechnol 2005; 29:
proteomics. Mol Biotechnol 2002; 22: 139-152 233-244
45 Somiari RI, Somiari S, Russell S, Shriver CD. Proteomics of 54 Deng SS, Xing TY, Zhou HY, Xiong RH, Lu YG, Wen B, Liu
breast carcinoma. J Chromatogr B Analyt Technol Biomed Life SQ, Yang HJ. Comparative proteome analysis of breast can-
Sci 2005; 815: 215-225 cer and adjacent normal breast tissues in human. Genomics
46 Srivastava S, Verma M. Proteomics technologies and bio- Proteomics Bioinformatics 2006; 4: 165-172
informativcs. In: Srivastava S, editor. Informatics in Pro- 55 Franks LM. What is cancer? In: �����������������������������
Franks LM, Teich NM, edi-
teomics. Boca Raton: Taylor and Francis, 2005 tors. Introduction
������������������������������������������������������
to the Cellular and Molecular Biology of
47 Xiao C, Srinivasan L, Calado DP, Patterson HC, Zhang B, Cancer. New York City, NY: Oxford University Press, 1986:
Wang J, Henderson JM, Kutok JL, Rajewsky K. Lymphopro- 2-10
liferative disease and autoimmunity in mice with increased 56 National Cancer Institute: What you need to know about
miR-17-92 expression in lymphocytes. Nat Immunol 2008; 9: ™ Breast cancer risk factors. Available from: URL: http: //
405-414 www.cancer.gov/cancertopics/wyntk/breast/page4
48 Montreuil J, Vliegenthart JFG, Schachter H. Glycoprotein 57 Liang S, Singh M, Gam LH. The differential expression of
and Disease. Amsterdam: Elsevier, 1996 aqueous soluble proteins in breast normal and cancerous tis-
49 Palzkill T. Proteomics. Massachusetts: Kluwer Academic sues in relation to ethnicity of the patients; Chinese, Malay
Publishers, 2002 and Indian. Dis Markers 2010; 28: 149-165
50 Pritzker KP. Cancer biomarkers: easier said than done. Clin 58 Liang S, Singh M, Dharmaraj S, Gam LH. The PCA and
Chem 2002; 48: 1147-1150 LDA analysis on the differential expression of proteins in
51 Polanski M, Anderson NL. A list of candidate cancer bio- breast cancer. Dis Markers 2010; 29: 231-242