ETC and Oxidative Phosphorylation
ETC and Oxidative Phosphorylation
CHAPTER
OXIDATIVE
PHOSPHORYLATION
AND MITOCHONDRIAL
MEMBRANE TRANSPORTERS
14
Flow of electrons along the electron transport chain (ETC) is the final event in the cellular respiration which releases energy
for generation of ATP. The electron transport chains are embedded in the inner mitochondrial membrane. Each chain
consists of a series of electron carrying molecules. Electrons move from one carrier protein to another in a stepwise fashion; each
carrier being capable of accepting electrons (either with or without accompanying protons) from the preceding carrier
and donating them to the next one. At the end of ETC, the electrons reach oxygen, the final acceptor of electrons.
The electrons for the ETC are obtained during catabolism of foodstuffs, e.g. carbohydrates (particularly glucose), fatty
acids and amino acids. As these substances undergo oxidation, they lose electrons to the reduction–oxidation cofactors
NAD and FAD (less commonly to others) to generate NADH and FADH2, respectively. These reduced cofactors can give
rise to ATP by transferring their electrons to the electron transport chain. Initially these electrons are energy rich, but as
they flow down the ETC, much of their energy is lost. The lost energy is released in small packets, most of which are used
for the generation of ATP, while the rest is dissipated (i.e. entropy). Flow of electrons along the ETC (i.e. oxidation) and
generation of ATP (i.e. phosphorylation) are coupled processes, together referred to as oxidative phosphorylation. The
phosphorylation follows the oxidation; if the latter is inhibited, the former is also similarly affected. Oxidative phos-
phorylation is described in this chapter followed by a discussion about other carrier proteins that are located in the inner
mitochondrial membrane.
At the end of this chapter, the student should be able to understand:
Electron transport chain: its localization, carrier proteins, redox couples, free energy changes, reactions and inhibitors.
Oxidative phosphorylation, hypotheses for ATP generation during ETC and uncouplers.
Various membrane transport systems located in the inner mitochondrial membrane.
A B C Substrate Product
(i)
Urea
Other dehydrogenases, called FAD-linked dehydroge-
Pyruvate Carbon skeleton
nases, transfer electrons to FAD to form FADH2.
FAD FADH2
Acetyl CoA
Substrate Product
(ii)
Subsequently the reduced coenzymes, NADH and
TCA FADH2, transfer electrons to the ETC at different levels.
cycle Some NAD-linked and FAD-linked dehydrogenases pres-
ent in catabolic pathways are given in Table 14.1.
NADH/FADH2
During all major catabolic pathways, electron pair is
removed from the substrate and transferred to NAD or
FAD. This forms reduced coenzymes—NADH and FADH2,
respectively. Indeed, formation of reduced coenzymes
Electron
is common feature of all catabolic pathways.
Transport ATP
Chain DH
Substrate(s) Product(s)
½O2
2H 2H+
1O 2H+
H2O 2e−
2 2 ETC 2e−
B. Localization of ETC the total membrane weight. Rest of the membrane structure
is formed by lipids. This contrasts with the other cell mem-
Electron transport chains are located in the inner mito- branes which contain less amount of proteins (Chapter 7).
chondrial membrane (IMM). The catabolic pathways Mitochondrial matrix is the space enclosed by the
that yield electrons for ETC occur in the mitochondrial inner mitochondrial membrane. It contains a gel-like
matrix. Thus, there is close proximity of catabolic path- solution in which several catabolic pathways, e.g. citric acid
ways with ETC which ensures that the electrons obtained cycle, b-oxidation of fatty acids, and oxidation of amino acids,
during these pathways are rapidly transferred to ETC occur. In addition to enzymes of these pathways, the
(Fig. 14.3). Moreover, the ATP synthesizing system is also matrix contains coenzymes such as NAD, NADP and
located in IMM. This permits a rapid utilization of the FAD, and components of the phosphorylation reaction,
energy, which was released earlier during the electron e.g. ADP, ATP and phosphate ions.
flow, for the synthesis of ATP. Since all these processes
concerned with oxidative phosphorylation take place in
Proximity of catabolic pathways (occur in matrix) with the
mitochondria, it is appropriate to examine the anatomy electron transport chains and ATP synthesizing systems
of mitochondria in some detail. (located in IMM) ensures that (i) the electrons obtained
during catabolism are promptly transferred to ETC and (ii)
Biochemical Anatomy of Mitochondrion there is rapid utilization of energy for ATP synthesis.
Mitochondrion has two surrounding membranes: the
outer mitochondrial membrane and the inner mitochon-
drial membrane. The outer mitochondrial membrane C. Electron Transport: An Overview
has a relatively simple structure. It contains special pores
which make it permeable to most small molecules and ions. ETC consists of several electron carriers that are arranged
A few enzymes are also located in the membrane. The inner in a sequence shown in Figure 14.4.
mitochondrial membrane (IMM) has a more complex and
specialized structure. It contains a number of protein com- Catabolism
ponents such as enzymes, transport proteins, several sets of
electron transport chains, and the ATP synthesizing system.
NADH
A large surface area is required to accommodate all these
components. For this purpose, the membrane structure is 2e−
highly convoluted, being thrown into numerous folds,
NADH
called cristae, which serve to increase surface area of the Dehydrogenase
IMM several-fold (Fig. 14.3). Thus, the IMM of a single
mitochondrion in liver may contain over 10,000 sets of
electron transport chains and ATP synthase molecules.
Ubiquinone
In contrast to the outer mitochondrial membrane which
is freely permeable, the inner mitochondrial membrane is 2e−
selectively permeable, meaning that it is impermeable to
2 × Cytochrome b
most ions (H, K, Na) and small molecules (ADP, ATP),
and permeable only to a few: only water, carbon dioxide 2e−
and oxygen can freely move across the IMM. Movement
2 × Cytochrome c1
of other substances across the membrane can take place
only through mediation of specific transport proteins. 2e−
Presence of these protein components makes the IMM
unusually rich in proteins which constitute 75% or more of 2 × Cytochrome c
2e−
Mitochondrial Inner mitochondrial
matrix membrane 2 × Cytochrome aa3
Intermembrane
Cristae 2e−
space
Outer mitochondrial
membrane 1
2H++ 2 O2 H2O
ATP synthase molecules
Fig. 14.3. Biochemical anatomy of a mitochondrion. Fig. 14.4. An overview of electron transport chain.
304 Textbook of Medical Biochemistry
The electrons are transported from one carrier molecule to The tendency of a redox couple to donate or accept
the next either as hydride ion (:H–) which bears two electrons electrons is determined by standard redox potential (E0).
(discussed later), or as hydrogen atoms or as free electrons. Every redox couple has a characteristic value of E0.
The starting compound, that loses its electrons to the Electrons always flow from the lower to the higher redox
ETC is NADH and the final acceptor of the electrons is oxygen. potential, so that redox systems with negative E0 tend to
NADH is formed by transfer of energy-rich electron pair donate electrons to redox systems with positive E0. For
removed from a substrate during catabolism, as mentioned example:
earlier (equation i). NADH loses its electrons to the first car-
Standard redox potential of NADH/NAD is –0.32 V.
rier of ETC (NADH dehydrogenase). Thereafter, the elec-
That of CoQH2/CoQ is 0.10 V.
trons pass down from one carrier to another. During the
Therefore, direction of flow of electrons is from
electron transfer, the components of ETC accept or donate
NADH/NAD to ubiquinol/ubiquinone and never
electrons, either with or without accompanying protons. A
the opposite way.
simple transport chain is depicted as below.
For the same reason, electrons flow from FMNH2/
NADH + H+ A BH2 C H2O FMN (E0 0.30 V) to CoQH2/CoQ (E0 0.05 V). In this
way, all components of the respiratory chain are arranged
to range from the most negative E0 (0.32 V of NADH/
1O NAD) to the most positive E0 (0.82 V of H2O/O2)
NADH+
AH2 B CH2
2 2
pair.
The sum of all these reactions is: Standard redox potential of components of ETC are
1 shown in Table 14.2.
NADH H O2 NAD H2O (iii)
2
The electrons may travel, not only as free electron (or
hydride) but also as hydrogen atoms. This is logical as a Redox reactions are electron-transfer reactions requiring a
hydrogen atom consists of one electron and one proton. reductant (e donor) and an oxidant (e acceptor). Together
they constitute a redox couple. The standard redox
potential is the most useful property of redox couples.
Oxidations are broken down into several sequential reactions
with smaller free energy changes. In each step the starting car-
rier is oxidized and the next carrier is reduced. This step-wise
arrangement of electron transfer enables the body to capture
E. Free Energy Changes During
the energy for work rather than simply dissipate it as heat. Electron Flow
Just as all spontaneous transformations proceed in such
D. Redox Couples and Redox Potential a direction that there is a loss of free energy, the electron
transfer between the redox pairs is also accompanied by F. Components of Electron Transport
release of free energy. Amount of free energy released is
directly proportional to a difference in the standard
Chain
redox potentials of the redox pairs. A definite relation-
Five distinct types of components are present in ETC:
ship exists between the two as below:
(a) Nicotinamide nucleotides, (b) flavoproteins (con-
G0’ –nF E0 taining flavin mononucleotide or FMN; and flavin ade-
nine dinucleotide or FAD), (c) iron–sulphur centres,
G0’ standard free energy change in kcal/mole.
(d) ubiquinone, and (e) cytochromes. Their arrangement
n number of reducing equivalents (i.e. electrons) trans-
in the respiratory chain has been depicted in Figure 14.5.
ferred (its value is 2 in the present case, as the elec-
trons are transferred in pairs).
F Faraday’s constant (23.062 kcal V–1 mol–1). Nicotinamide Nucleotides
E0 difference between the standard redox potentials of Nicotinamide adenine dinucleotide (NAD) and nico-
the electron-donor and the electron-acceptor redox tinamide adenine dinucleotide phosphate (NADP) are
systems. the coenzymes derived from the vitamin niacin. The for-
The given relationship holds good under standard mer is more actively involved in the ETC. It is reduced to
conditions, i.e. concentration of 1.0 M of both the elec- NADH by transfer of a pair of electrons (in form of
tron donor and the electron acceptor, temperature 25ºC hydride ion) from the substrate by action of various dehy-
and pH 7.0. It can be used to calculate the standard free drogenases (see NAD-linked dehydrogenases; Table 14.1).
energy change as a pair of electrons passes along the elec- NAD H 2e NADH (Hydride is a proton, H,
tron transport chain, from the first redox couple (i.e. bearing two electrons)
NADH/NAD; Eº’ –0.32 V) to the last one (i.e. H2O)/
O2; Eº’ 0.82 V). NADH subsequently loses its electrons to the initial
component of ETC: NADH dehydrogenase, a large protein
G0’ 2 (23.062) [0.82 – (–0.32)] –52.6 kcal/mole.
complex embedded in IMM.
This relationship can also be used to calculate the NADP is similarly produced by action of NADP-
energy changes for individual segments of the electron dependent dehydrogenases, but it is mostly involved in
transport chain. reductive biosynthesis of biomolecules.
Flavoproteins
Electrons flow from the redox couples with more nega-
Flavoproteins are important hydrogen carriers. Their pros-
tive redox potential to those with more positive redox
thetic groups are flavins (FMN or FAD), which are deriva-
potentials and release energy in the process.
tives of the vitamin riboflavin. These coenzymes have
V (Volt)
(−0.30 V)
−0.4
NADH E-FMN
(−0.32 V)
−0.2
Fe-S
kcal
Cu
+0.6
+0.8 O2 (+0.82 V)
Direction of electron flow
Fig. 14.5. The respiratory chain of mitochondria showing direction of flow of electrons and energy relationships. The arrows ()
indicate the sites of ATP generation (E NADH dehydrogenase, Fe-S iron-sulphur centres, CoQ coenzyme Q or ubiquinone,
cyt cytochrome).
306 Textbook of Medical Biochemistry
chemically related structures. Both have a flavin mono- respectively. CoQ10 is the homologue that occurs in humans.
nucleotide (FMN) unit, which contains the reactive site. It can accept electrons from FMNH2 or from FADH2
FAD has an additional sugar group and an adenine base, and transfers them to cytochromes.
which completes its structure (Chapter 18). FAD and Generally, ubiquinone carries two hydrogen atoms, but
FMN react with two protons plus two electron, in alter- can also act in one-electron transfers by forming a free-
nating between the reduced and the oxidized state: radical intermediate, called semiquinone intermediate.
The reduced form is called ubiquinol (Fig. 14.6).
FAD 2H 2e FADH2
FMN is prosthetic group of NADH dehydrogenase. It is Cytochromes
bound firmly to the enzyme protein and does not func- Cytochromes are the final class of components that par-
tion as a diffusible co-substrate. FAD, on the other hand, ticipate in electron transport. They are integral mem-
is linked to another flavoprotein, succinate dehydrogenase, brane proteins (with the exception of cytochrome c), and
and functions as a diffusible co-substrate. are named so because they are coloured cellular compo-
nents (cyto cell, chrome colour). They are conjugated pro-
Iron-sulphur Centres teins, containing an iron-porphyrin as a prosthetic group. In
They are also known as non-haem iron proteins or the most cases, this iron-porphyrin is the haem group, also
iron-sulphur clusters. Several types of iron sulphur (FeS) found in oxygen transport proteins, e.g. haemoglobin and
centres exist, but in each case the iron atoms are coordi- myoglobin. In contrast to these proteins, however, in cyto-
nated to inorganic sulphur atoms (and the sulphur of chromes the haem iron cannot bind oxygen (or carbon
cysteine side chains in proteins). Within an FeS cluster, monoxide or any other potential ligand), but rather acts as
an electron is carried by the iron atom, which, upon accept- a reversible electron carrier. Iron in cytochromes (but not
ing the electron, changes from the Fe3 (ferric) state to in haemoglobin or myoglobin) undergoes physiological
the Fe2 (ferrous) state. As the electron is passed to another oxidation–reduction between the ferrous (2) and ferric (3)
electron carrier, the iron atom of the FeS cluster changes states, as electrons are shuttled from one protein to another.
back again to the ferric state. Why cytochromes can carry only electrons, but can-
As explained in the next section, one group of iron- not bind oxygen? This is shown diagrammatically in
sulphur protein participates in the transfer of electrons Figure 14.7. In cytochromes, the iron group of the haem
from FMN to ubiquinone (CoQ), and the other from is anchored on both sides, on one side by histidine and
cytochrome b to cytochrome c1 (Fig. 14.5). on the other by methionine. In haemoglobin, it is only
anchored on one side by histidine, enabling oxygen to
Ubiquinone interact with the free side of Fe.
Ubiquinone, also known as coenzyme Q, is a mobile dif- The main varieties of cytochromes in mitochondria
fusible hydrogen carrier, which can move from donor to are the a, b, and c types of cytochromes, the classification
acceptor molecules during electron transport. It is a ben- being based on the respective absorption spectrum and
zoquinone with a hydrocarbon tail of (usually) 10 isoprene the type of porphyrin structure present. The cytochrome
(branched 5-carbon) units (Fig. 14.6), which makes it of b type contains haem, whereas the others have por-
strongly hydrophobic and confines it to the lipid bilayer phyrins with different side chains. Cytochromes a and a3
of the inner mitochondrial membrane. It was also named contain “haem a” rather than “ordinary haem”. In this the
ubiquinone because of its ubiquitous or widespread dis- porphyrin ring of haem is modified: (i) a methyl group
tribution. of haem is oxidized to a formyl group, and (ii) a hydro-
The names coenzyme Q and ubiquinone and the phobic isoprenoid chain is attached to one of the vinyl
abbreviations CoQ and UQ are used interchangeably. A groups. (See chapter 16 for haem structure.)
subscript(n) indicates the number of isoprene units; for The cytochrome families are subclassified in terms
example, CoQ6 or CoQ10 contain 6 or 10 isoprene units of the historical order of their discovery (b1, b2, b3 ...) or
O OH
H3CO CH3 H3CO CH3
2e−, 2H+
CH3 CH3
Fig. 14.6. Structure of ubiquinone, also called coenzyme Q (CoQ) or UQ. The isoprene units are shown in colour.
Electron Transport, Oxidative Phosphorylation and Mitochondrial Membrane Transporters 307
O2
NADH ubiquinone Rotenone, BAL,
His N S Met His N Complex I
reductase (Site 1) barbitruates
Complex II
Ubiquinone Succinate
Haem group Haem group
Succinate-ubiquinone
Fig. 14.7. Haem is prosthetic group in both cytochrome C and reductase
haemoglobin, but performs different roles. It serves as oxygen
Ubiquinol-cytochrome c Antimycin A
carrier in haemoglobin and electron carrier in cytochrome C Complex III
reductase (Site 2)
(His histidine; Met methionine).
Cytochrome c
the wavelength (nm) of a characteristic spectral absorp-
tion peak (b562, b566). The electrons are transported from
coenzyme Q to cytochromes in the order: b, c1, c, a and Cytochrome oxidase
Cyanide, carbon
a3. The last two can directly react with molecular oxygen. Complex IV monoxide,
(Site 3)
hydrogen sulphide
Besides haem iron, the aa3 are associated with copper,
which acts as an electron carrier by a valence change O2
between the cuprous (Cu) and cupric (Cu2). As
described later, it (aa3) participates in the last reaction Fig. 14.8. The structured complex of functionally related elec-
and transfer of electrons to molecular oxygen. tron carriers. Inhibitors of ETC ( ) are also shown. Sites 1, 2 and
3 refer to the sites of proton pumping (“phosphorylation sites”).
Respiratory chain contains flavoproteins, iron-sulphur As the electron pair flows from NADH to complex I, it
proteins, ubiquinone, cytochromes and protein-bound is accepted together with a hydrogen ions, H, such that
copper. Each component participates in electron trans- two electrons and two H are accepted in total. As a result
fers by changing oxidation state between the oxidized FMN is converted into FMNH2. The electrons are then
form and the reduced form. transferred within the complex I to iron-sulphur clusters,
and then passed onto ubiquinone, which is thereby con-
verted to ubiquinol (Fig. 14.6). Ubiquinone has a long,
G. Pathway of Mitochondrial Electron flexible, lipid soluble arm, and so it can readily move through
Transport the inner membrane to transfer the electrons to the next
enzyme in the sequence, i.e. the Complex III (the
Only four components of the respiratory chain are freely Complex II will be dealt with later).
diffusible (NADH, ubiquinone, cytochrome c and oxy-
gen), and the rest are organized as constituents of large The, complex I contains various electron carriers that
protein complexes (Fig. 14.8). There are four complexes work sequentially to carry electrons down the chain to
(I to IV) embedded in the inner mitochondrial mem- ubiquinone, which then transfers them to the complex III.
brane. Exact detail of the complexes is not known. What
is known is: (i) that a complex contains many polypeptide or
protein subunits and several iron centres, (ii) that these com- Complex III
ponents can be readily reduced or oxidized, and (iii) that Complex III (ubiquinol-cytochrome c reductase complex)
they transfer electrons as they flip between the reduced once again uses iron atoms to shuffle electrons within its
state and the oxidized state. structure. It contains cytochrome b, an iron-sulphur centre
(called Rieske’s protein), and cytochrome C1.
Complex I QH2 Cyt b FeS Cyt c1 Cyt c
Oxidation of NADH begins with Complex I (also called
Complex III
NADH-ubiquinone reductase or NADH dehydrogenase com-
Figure 14.9 elaborately depicts the electrons passing
plex), which comprises 28–41 protein subunits (depend-
from ubiquinol, through the cytochrome b, FeS and
ing upon the species), FMN as a prosthetic group and
cytochrome c1 components of this complex, and the
about 7-iron-sulphur (FeS) centres. It transfers electrons
accompanying ferric-ferrous interconversions.
from NADH to ubiquinone via FMN and FeS centre:
Note that cytochrome c is a peripheral membrane protein
Substrate NADH FMNH2 FeS Ubiquinone bound to the outer membrane surface, which transfers
Complex I its electrons to Complex IV.
308 Textbook of Medical Biochemistry
2H+
Complex III
Fig. 14.9. Flow of electrons from ubiquinol to cytochrome c via the large, multiprotein complex III, consisting of cytochrome b, an
iron sulphur protein and cytochrome c1.
Fig. 14.11. Protons are allowed to flow back into the mito- B. ATP Production and P : O Ratio
chondrion through a specific proton channel in F0. This proton
channel is coupled to an ATP synthesizing enzyme (the F1 unit).
It is well established experimentally that a pair of elec-
380 dDa. It can be visualized in the electron microscope trons originating in NADH generates three molecules of
as small buttons on the inner surface of the inner mito- ATP via the oxidative phosphorylation pathway, and that
chondrial membrane. The F1 unit is attached to the F0 from FADH2 generates two. It is said that the P : O ratio
unit, an integral membrane protein having a pore called is three for electrons from NADH and two for those
proton channel. from FADH2. P referring to a high-energy phosphate
The proton channel is crucial for ATP generation. This bond being synthesized and O referring to an atom of
is because the IMM is impermeable to protons, and so oxygen being reduced. Thus P : O ratio is defined as the
the extruded protons in the intermembrane space can re- number of ATPs generated for each oxygen consumed. Refer
enter the mitochondrial matrix through this proton to Box 14.1 for more information on relationship
channel. As these protons move inwards, the energy between ATP generation and oxygen consumption.
inherent in the electrochemical gradient is liberated as
concentrated packets. These energy packets are readily Sites of ATP Production
used by the F1-unit to fuel ATP synthesis. There are three energy conserving segments that release
sufficient amount of energy to result in synthesis of an
ATP molecule each. At each of these segments, called
The two major components of ATP synthase are F1 (ATP phosphorylation sites (indicated by arrows in Fig. 14.5),
synthesizing) attached to F0, which is proton channel quantum of energy released exceeds 10 kcal/mole.
spanning the IMM. In mitochondria this complex uses the Because ATP is synthesized only when protons flow, this
energy released by electron transport to drive ATP synthe- results in halting ATP synthesis.
sis, but in isolation it hydrolyzes ATP (ATPase activity).
1. The Site I is between NADH and ubiquinone (specifi-
Action of the ATP synthase is inhibited by an antibi- cally during electron flow through the FeS complex).
otic, oligomycin. The latter binds with F0 portion of this 2. The Site II is between ubiquinol and cytochrome c
enzyme and closes the proton channel. As a result, re- (specifically during electron flow from cytochrome b
entry of protons is blocked and the energy inherent in to cytochrome c1).
the electrochemical gradient cannot be used for ATP gen- 3. The Site III is between cytochrome c and oxygen (i.e.
eration. As more and more protons are actively pumped the cytochrome oxidation reaction).
out, the proton concentration in the intermembrane
space rises. It becomes difficult to pump protons against
the rising gradient and finally electron transport also
P : O ratio is defined as the number of ATPs synthesized per
oxygen reduced, is three with NADH and two with FADH2.
stops. At this stage, the ATP synthase is turned off.
Success of chemiosmotic hypothesis: The chemiosmotic The three sites correspond to Complexes I, III and IV
hypothesis has been widely accepted because it can pro- of the ETC. Since Complex I is bypassed with FADH2, only
vide explanations for the following phenomena: two ATPs are generated (P : O ratio-2).
Electron Transport, Oxidative Phosphorylation and Mitochondrial Membrane Transporters 311
BOX 14.1
Acceptor Control of Respiration
Though ATP generation follows electron transport, the rate of electron flow is dependent on ATP generation itself. Under nor-
mal circumstances, as the electron transport proceeds, ADP and phosphate are removed from cytosol and intramitochondrial
concentration of ATP builds up concomitantly. When the ADP is depleted from cytosol, the rate of electron flow (measured by
oxygen consumption) falls. This is because of the limiting action of ADP on rate of oxygen consumption. This is known as “rest-
ing respiration”. Conversely, when ADP concentration rises in cytosol (for example, after some energy requiring process which
degrades ATP to ADP), phosphorylation of ADP increases. Rate of oxygen consumption increases in this instance because of ADP-
induced oxygen consumption. This is followed by (coupled) phosphorylation of ADP to ATP. Such dependence of the rate of
oxygen consumption on the intracellular concentration of ADP (the phosphate acceptor), is called acceptor control of respiration.
Active
respiration
Oxygen Resting
consumption respiration
Time
In the case of poisoning by certain uncouplers (e.g. pentachlorophenol), ATP generation is halted and concentration of ADP
in cytosol rises. Rise in ADP concentration causes increase in oxygen consumption, which implies speeding up of the electron
transport activity.
C. Energetics OH
NO2
If one starts from NADH, with its redox potential of
–0.32 V, and ends with oxygen, redox potential 0.82 V,
then one spans a total of 1.14 V (Fig. 14.5). As discussed NO2
earlier, this comes to a theoretical availability of about Fig. 14.12. Structure of 2,4 dinitrophenol, a highly diffusible
52.6 kcal/mole (equation iv). Because three ATP mole- chemical that uncouples oxidative phosphorylation by trans-
cules are synthesized for each pair of electrons channeled porting protons across the IMM.
to oxygen, oxidative phosphorylation recovers 21.9 kcal
preventing the building up of proton gradient. Though an
(each ATP 7.3 kcal) of the 52.6 kcal available as ATP, for
uncoupler impedes ATP generation, it has no effect on elec-
an approximate efficiency of 48%.
tron transport. The latter process continues as before, or is
21.9 rather enhanced due to acceptor control of respiration, dis-
Efficiency 100 48%
52.6 cussed later. The energy released by electron flow is mostly
The remaining 52% of energy is lost as heat. dissipated (i.e. entropy). Some portion of it generates heat:
Uncouplers: Being linked through a proton gradient, the this explains thermogenic effect of some uncouplers (Case 14.1).
oxidation and the phosphorylation are said to be coupled The other uncouplers include pentachlorophenol,
processes. They can be uncoupled from each other by dinitrocresol, and trifluorocarbonylcyanide. The latter
certain compounds, called the uncouplers. Primary action dissipates the proton gradient 100 times faster than DNP.
of these compounds is to increase permeability of the
inner mitochondrial membrane to protons. As a result, The uncouplers allow electrons transport to proceed
relatively free movement of protons across the IMM without ATP synthesis. They uncouple by carrying H ions
occurs, which prevents building of the electrochemical across the IMM and hence dissipate the proton (electro-
gradient. Since this gradient is essential for ATP genera- chemical) gradient.
tion, failure to build it stops ATP generation.
An example of uncoupler is 2,4-dinitrophenol (Fig. Physiological uncouplers and ionophores: Some endoge-
14.12). The compound can freely move across the IMM due nous compounds, including free fatty acids, bilirubin
to its lipophilic nature. It can carry a proton along with itself. and possibly thyroxine, also can act as uncouplers at
As a result, free movement of protons across the IMM occurs, concentrations well above the physiological range. They
312 Textbook of Medical Biochemistry
Glutamate Glutamate
5
Aspartate Aspartate
Dihydroxy-
NADH Dihydroxyacetone
acetone FADH2
phosphate E
phosphate
IMM T
C
1. Cytosolic glycerol phosphate dehydrogenase
2. Mitochondrial glycerol phosphate dehydrogenase
Fig. 14.14. Transfer of reducing equivalents from cytosol into mitochondrial matrix. (a) Malate aspartate shuttle, (b) Glycerol
phosphate shuttle (IMM mitochondrial matrix).
314 Textbook of Medical Biochemistry
two ATPs are therefore produced for each pair of reduc- fertilization. The polypeptide chains encoded by mtDNA
ing equivalents transferred. include seven subunits of NADH-Q reductase, one subunit
of QH2-cytochrome c reductase, three subunits of cytochrome
oxidase and two subunits of ATP synthase. All other mito-
Malate aspartate shuttle (generates three ATPs) is more chondrial proteins are encoded by nuclear genes and syn-
important in liver and heart; and the glycerol phosphate thesized in cytoplasmic ribosomes.
shuttle (generates two ATPs) is more important in muscle Mitochondrial DNA is 10 times more susceptible to
and brain.
mutations than nuclear DNA. Some of these mutations
result in absence of specific polypeptide chains. Faulty
operation of the electron transport pathway results and
IV. Enzymes Participating in the ATP production is decreased. These disorders are
known as mitochondrial myopathies and they most com-
Biological Oxidation monly affect the tissues with high rate of oxidative phos-
phorylation. The mitochondrial myopathies are tissue
The enzymes involved in biological oxidation catalyze specific; some affect the heart, others the skeletal muscles.
oxidation-reduction reactions, hence they belong to the Many are accompanied by lactic acidosis, because the
class I, i.e. oxidoreductases (Chapter 6). They are subclassified inability to reduce NADH normally results in channeling
as: (a) dehydrogenases, (b) oxidases, and (c) hydroperoxidases. of pyruvate toward lactic acid production (Chapter 9).
Leber’s hereditary optic neuropathy (LHON) is a mitochon-
A. Dehydrogenases drial myopathy, characterized by sudden onset of blindness
in adults, associated with degeneration of the optic nerve.
They are most common of all oxidoreductases. They cata-
lyze transfer of hydrogen between a substrate and a coen- Mutations in mitochondrial DNA cause inherited disorders
zyme, most commonly NAD, FAD, NADP or FMN. of oxidative phosphorylation, e.g. Leber’s hereditary optic
These enzymes are named according to the substrate neuropathy.
from which they remove the hydrogen (Table 14.1).
B. Oxidases Exercises
They catalyze transfer of hydrogen removed from a sub- Essay type questions
strate to oxygen. Mostly this results in formation of 1. What is redox potential and what is its significance?
water. Cytochrome oxidase, the terminal component of Describe various components of electron transport
ETC, is an example. chain and discuss the oxidation of NADH and FADH2.
2. What do you understand by the term P : O ratio? Indicate
diagrammatically the sites of ATP generation in the
C. Hydroperoxidases mitochondrial respiratory chain and their inhibitors.
3. What is oxidative phosphorylation? Discuss in detail
They use hydrogen peroxide or an inorganic peroxide as the chemiosmotic hypothesis of ATP synthesis and
a substrate. They are needed for degradation of hydrogen explain how the process of oxidative phosphoryla-
peroxide that may be produced in the reactions catalyzed tion is arrested by various inhibitors.
by the dehydrogenases. Technically, catalase is also a per- 4. What are uncouplers of biological oxidation? State
oxidase: it degrades hydrogen peroxide to molecular oxy- their mechanism of action.
gen and water.
Write short notes on
H2O2 H2O O2 1. Uncouplers
2. P : O ratio
3. Redox potential
V. Mitochondrial Myopathies 4. ATP synthesis
5. Physiological uncouplers
Mitochondrial DNA consists of a circular DNA molecule 6. Brown adipose
of 16,569 base pairs which encodes 13 polypeptides, 22 7. Ubiquinone
tRNAs, and the RNAs of mitochondrial ribosomes (12S 8. Cytochrome aa3
and 16S). The mtDNA is maternally inherited since mito- 9. Chemiosmotic theory
chondria from sperm does not enter the ovum during 10. Malate aspartate shuttle
Electron Transport, Oxidative Phosphorylation and Mitochondrial Membrane Transporters 315
CLINICAL CASE
CASE 14.1 Labourer exposed to a toxic wood preservative
A labourer felt dizzy and feverish while spraying penta- Note: Rate of electron flow is reflected by O2 consump-
chlorophenol, a popular wood preservative that kills ter- tion rate.
mites, fungi and bacteria. While being taken to the hospital
he lost consciousness on the way. He was admitted in the (a) (b)
hospital emergency. On examination, his body tempera-
ture was 39.9ºC, and respiratory rate was 60 per minute.
consumption
consumption
He died in a comatose state, after two days. Pentachlorophenol DNP
Oxygen
Oxygen
On autopsy, the subcutaneous and the omental fats
were markedly depleted. There was pulmonary conges-
tion, and the marrow examination showed evidence of
enhanced erythropoiesis.
Exposure to the wood preservative was thought to be Time Time
responsible for the patient’s condition. Effect of the chemical (c)
was investigated by performing the following tests on a prep- DNP
aration of rat liver mitochondria. The mitochondria were
consumption
suspended in a suitable buffer, to which ADP and succinate Pentachlorophenol
Oxygen
were added. The preparation was incubated in the oxygen
electrode chamber and the rate of oxygen consumption was
measured. Addition of pentachlorophenol to this prepara-
tion caused a marked increase in the oxygen consumption
(Experiment a). A similar increase was observed following Time
addition of 2, 4 dinitrophenol (Experiment b) to this prepara-
tion. However, when the dinitrophenol (DNP) was added fol- Q.1. State the possible mechanism of action of the uncou-
lowing the addition of pentachlorophenol, no further increase pling effect of the pentachlorophenol.
in oxygen consumption resulted (Experiment c). Q.2. Interpret the test results and elucidate the action of
Experiment a–c. Effect of the pentachlorophenol and pentachlorophenol on mitochondrial respiration.
dinitrophenol (DNP) on oxygen consumption by rat liver Q.3. Explain the clinical and the autopsy findings of this
mitochondria. patient in molecular terms.