Y9-MYP. Unit 4. Genetics & Evolution
Y9-MYP. Unit 4. Genetics & Evolution
Genetics
(2022-2023)
Unit 5. Genetics
Genetics is the study of how hereditary characters are transferred from one individual to
another. Let’s review some basic concepts which are fundamental for a better understanding of
the unit.
NUCLEIC ACIDS
Within cells there are other types of nucleotides which do not make up nucleic acids. Among
these types of nucleotides ATP (adenosine-triphosphate) stands out.
Two nucleotides joined together gives rise to a dinucleotide. Many nucleotides joined together
form a polynucleotide. Nucleic acids are polynucleotides. RNA is a polynucleotide made of
ribonucleotides, whilst DNA is a polynucleotide made of deoxyribonucleotides.
DNA
Deoxyribonucleic acid is found in the nucleus of eukaryotic cells, and in the cytoplasm
of prokaryotic cells (we will see this later on). It consists of two polynucleotide chains or
strands, as they are called, that spiral around an imaginary axis to form a double helix
(a spiral staircase shape). The two strands of the double helix are complementary to
1
Unit 5. Genetics
(2022-2023)
each other. Only certain bases are compatible with each other: Adenine will only fit
next to Thymine and Cytosine will only fit next to Guanine. Therefore, if in one of the
strands there is an adenine, in the other strand there will be a thymine, and vice versa.
In the same way, when in one strand there is cytosine, in the other there will be
guanine, and vice versa.
Additionally, the two strands are anti parallel to each other; one is inverted with
respect to the other. One of them goes from 5’ to 3’ while the other from 3’ to 5’. This
double helix structure described by Watson and Crick is very stable due to the
hydrogen bonds between the nitrogenous bases: 2 hydrogen bonds between A and T,
and 3 hydrogen bonds between G and C.
Function: DNA is the most important molecule in living organisms since it contains the
genetic material of the organism, which will also be transferred to its descendants. DNA
is the main component of chromosomes which are long coils of double-stranded DNA,
which contain the genes. A gene is a portion of DNA- of chromosome- responsible
for a particular hereditary character (the unit of hereditary information); or, as we will
see later on, responsible for protein synthesis. Each gene determines the synthesis of a
particular protein.
2
Unit 5. Genetics
(2022-2023)
RNA
As we have already said, the genetic information is found in the DNA. But, how? This
information is encoded in a particular sequence or order of its nucleotides. You could
compare it to the order of the letters in a sentence. Every living organism is
characterized and defined by a determined order of such nucleotides.
The information encoded in DNA is organized in small units called genes. A gene is a
portion of DNA that carries the information for a particular character of an individual
(e.g. eye colour). Genes are located one after another along the filaments of DNA. Each
DNA filament is a chromosome. In the nucleus of each and every cell of an organism
there are a determined number of chromosomes. Each species of organisms has its
own number of chromosomes, which will be the same in all of its cells, with the
exception of sex cells or gametes. (Gametes contain half the number of chromosomes
than the rest of the cells). For example, we humans have 46 chromosomes inside each
of our cells (23 pairs). A chimpanzee has 48 chromosomes (24 pairs) inside each of its
cells etc. Therefore, all genes a species contains are found in the chromosomes (the
entire set of genes of an organism is its genome). In humans, each cell contains about
sixty thousand genes (60 000), which are located throughout the 23 pairs of
chromosomes. The genetic information of those genes is exactly the same in each cell
of the individual. However, not all cells in our body are the same nor do they carry out
the same functions. That is because not all of these genes are used by any one cell at
any one time. Just a few genes will be ‘switched on’ in any one cell at any one time and
the rest of the genes remain ‘switched off’. For example, a nerve cell will express a set
of genes that will not be expressed in a muscle cell and vice versa.
We have said that each gene – portion of DNA- contains the information of a particular
character, such as eye color. Now, how can a piece of DNA, with its particular
nucleotide sequence, have information to determine that a person will have, for
3
Unit 5. Genetics
(2022-2023)
example green eyes? The answer lays in proteins; which are the molecules that carry
out cellular functions. What genes really have are chemical instructions for protein
synthesis. Each gene determines the synthesis of a particular protein. As we will see
later on, the synthesized protein will be responsible for the expression of that
particular character, such as the green-colored eyes (refer to protein synthesis).
As we have seen, in order for the genetic information contained in genes (in DNA) to be
expressed, such information must be passed down to proteins. Proteins are synthesized
in the ribosomes, which are in the cytoplasm of the cell, so the information must
somehow get to them. This process, known as protein synthesis, is carried out with the
aid of other molecules (mRNA, rRNA and tRNA), and it has two steps (phases).
1st Transcription: the information contained in the DNA –in the gene- is
transferred to a molecule of mRNA (transcription takes place in the nucleus of the cell).
The mRNA leaves the nucleus taking the information to the cytoplasm of the cell.
2nd Translation: Once in the cytoplasm the mRNA joins with the organelles
known as ribosomes, which will translate the information into a protein. There will be a
different protein for each gene and each protein will be responsible for a particular
character of the individual- green colored eyes-.
This is the first property of DNA,- transcription and translation- and it is the
process by which the genetic code is expressed.
Transcription
Translation
2 DNA
4
Unit 5. Genetics
(2022-2023)
WHAT IS A GENE?
MUTATIONS
Mutations occur naturally as accidental changes to DNA or chromosomes during the cell
cycle. There are enzymes that repair and check DNA during replication but these
enzymes are not always 100% effective so changed or damaged DNA can be replicated.
The rate of mutation can be increased by some environmental factors. These factors are
called mutagens and include things like UV light, radiation, X rays and some chemicals..
The effect of mutations depends on where and when the mutation occurs. Because of
the way DNA is translated, a change in the DNA code may affect just one amino acid in a
protein or cause the entire protein to be translated incorrectly… Most mutations have
no visible effect on the organism. For mutations where there is an effect the result is
usually bad. An incorrect protein works less effectively or doesn't work at all and this
decreases the fitness of the organism. In very rare cases a mutation might result in a
protein that works better or does something new that provides an advantage to the
organism. This is what allows species to evolve and adapt to new conditions over time.
Types of mutations
There are many different ways that DNA can be changed, resulting in different types of
mutation. Here is a quick summary of a few of these:.
1. Substitution: a mutation that exchanges one base for another. This one is also
known as a missense mutation.
2. Insertion: a mutation in which extra base pairs are inserted into a new place in
the DNA.
5
Unit 5. Genetics
(2022-2023)
Frameshift: Since protein-coding DNA is divided into codons three bases long, insertions
and deletions can alter a gene so that its message is no longer correctly parsed.
There are other types of mutations as well, but this short list should give you an idea of
the possibilities.
Since the 70’s there have been great advances in the knowledge of nucleotides, as well
as some major developments in DNA technology (known as recombinant DNA
technology or genetic engineering) that allows the manipulation of genetic material.
DNA technology has launched an industrial revolution in biotechnology: specific genes
can be isolated, large amounts of pure DNA can be obtained, DNA can be spliced at
specific locations, genes from one organism can be transferred to other living
organisms where it can be replicated and expressed (transgenic organisms), the
synthesis of artificial genes etc.
The application of DNA technology is of great importance in different fields such as the
medical field, in the diagnosis of diseases and a possible cure of such diseases; in the
forensic field, identifying dead people or possible criminals; in the pharmaceutical
industry, in agriculture etc. The old mysteries of Genetics have now become clearer,
but the manipulation of the genetic material opens up new unknowns.
GENETIC ENGINEERING
6
Unit 5. Genetics
(2022-2023)
The use of genetic engineering in research has allowed the production of valuable
products by manipulating the genetic material of microorganisms such as: insulin
and the growth hormone, interferons, vaccines, enzymes for industrial use, etc.
Additionally, manipulation of the genome of some organisms has allowed the
development and production of a number of transgenic organisms (animals and
plants) for potential agricultural use.
7
Unit 5. Genetics
(2022-2023)
4. Vaccines. Traditional vaccines for viral diseases are of 2 types: particles of a virulent
virus that have been inactivated by a chemical or physical means, and active virus
particles of an attenuated (non-pathogenic) viral strain. In both cases some risks are
taken as not all the micoorganism is completely inactivated. With genetic
engineering, since most antigens are proteins, the genes of interest are cloned. (An
antigen is a foreign substance that triggers an immune response; some antigens
include molecules of viruses, bacteria, fungi, etc). Recombinant DNA techniques can
generate large amounts of a specific protein molecule from the protein coat of a
particular disease- causing virus, bacterium or other microbe. This avoids the risks
mentioned earlier.
8
Unit 5. Genetics
(2022-2023)
first period is called G1 (gap 1). This is when the cell grows in size and organelles are
being duplicated. The cell starts performing its functions. This is followed by the S
(synthesis) phase, during which the chromosomes duplicate. Then during the G2 (gap
2) phase the cell starts to prepare for Mitosis. Mitosis divides the nucleus and its
chromosomes, and cytokinesis divides the cytoplasm, producing two daughter cells.
Figure 1: Chromosome. (1) Chromatid. One of the two identical parts of the
chromosome after S phase. (2) Centromere. The point where the two chromatids
touch, and where the microtubules attach. (3) Short arm. (4) Long arm.
During the interphase the long filaments of DNA-protein complex called chromatin are
spread through the nucleus. The proteins associated with the DNA are called histones.
During all three phases of the interphase the chromatin is transcribing itself (therefore
synthesizing RNA, mRNA, tRNA and rRNA). It is an active period. However, when the
9
Unit 5. Genetics
(2022-2023)
cell is getting ready to divide, the chromatin condenses into compactly folded and
coiled chromosomes. These chromosomes now do not transcribe. The cell copies its
entire genome by duplicating its chromosomes during the S phase, after replication
each chromosome consists of two sister chromatids (each a collection of the same
genes present in single copy prior to replication). The sister chromatids are held
together by a structure called the centromere. The end parts of a chromosome are
called the telomeres.
Once cellular division has come to an end, each daughter cell has one sister chromatid
from every chromosome (see mitosis later on) so both daughter cells carry identical
information. As the interphase starts in each of the new daughter cells, chromosomes
start to uncoil going back to the thin fiber chromatin. The chromatin is so thin it can not
be seen very well. It starts again to transcribe, then during the S phase it replicates to
be ready for the next mitotic division.
The majority of the cells of an organism are diploid (2n); they have two sets of
chromosomes. Chromosomes go in pairs (homologous), of the same size and shape,
and have the same information for the same characters but they are not identical. In a
particular place of a chromosome (the same place for both of the pair) we will find the
information for hair colour, but in one chromosome we could have the allele for black
hair and on the homologous chromosome the allele for blond hair. Each homologous
chromosome comes from one of the parents. To summarize, we can say that a diploid
cell has 2n chromosomes, where n indicates the number of one set of chromosomes.
This number is characteristic of each species.
Let’s use humans as an example. In all normal body cells (somatic cells) we have 2n
chromosomes as these cells are diploid (2n is 46, therefore, n is 23). However, the
number of chromosomes in a gamete – sperm and ovum- is the haploid number n.
Cells that are haploid only have one set of chromosomes. When fertilization takes place
during sexual reproduction, two haploid gametes fuse together to restore the diploid
number in the zygote (46 in humans).
When normal body cells – somatic cells- divide, they do it through a process known as
mitosis. First of all, cells will replicate their DNA, their chromosomes. Therefore, they
will have 4n chromosomes (92 in humans) and then 23 homologous pairs will go to each
new daughter cell. Therefore, daughter cells are identical to each other and to the
mother cell (all diploid cells).
However, sex cells, or gametes, divide through a process known as meiosis. Again, they
will first replicate their DNA, having 4n chromosomes, but they undergo two divisions.
10
Unit 5. Genetics
(2022-2023)
From the first division 2 cells are formed each having 2n chromosomes, which again
divide resulting in a total of four haploid cells (n), each different from the other and
different from the mother cell. When gametes fuse during fertilization, the
characteristic 2n of the species is restored.
In mammals and other living organisms there is a chromosome pair that determines the
sexual characteristic of the individual. These are called sex chromosomes X and Y.
Females have two X chromosomes and males have an X and a Y chromosome. The rest
of the 44 chromosomes (in humans) are called autosomes (autosomal chromosomes).
The group of chromosomes of a cell is the karyotype. Chromosomes can be classified by
their homologous pair, and ordered by size and shape. The order obtained is called an
idiogram. Using specific staining techniques, banding of chromosomes is obtained
which allows us to pair the homologous chromosomes, as well as to group them by
decreasing size. This also allows us to determine some genetic diseases.
11
Unit 5. Genetics
(2022-2023)
Meiosis
Concept: it is a type of cellular division needed in organisms with sexual reproduction.
In sexual reproduction, there is fertilization, which is the fusion of haploid gametes to
restore the diploid number in the zygote. The zygote, by successive mitotic divisions
gives rise to the multi-cellular organism, which cells are therefore diploid, all
containing identical genetic information.
If the gametes were also produced by mitosis, these would be diploid and genetically
identical. During fertilization, the fusion of these diploid gametes would produce a
tetraploid (4n) zygote, which would give rise to 4n organisms. In the same line, these
4n organisms would produce 4n gametes…. and so on. In each generation the number
of chromosomes of the species would be doubled. Therefore a mechanism of cell
12
Unit 5. Genetics
(2022-2023)
division is needed where the number of chromosomes is reduced (halved): going from
2n cells to n cells. This process is meiosis.
During metaphase I, the homologous pairs are randomly arranged on the metaphase
plate: sometimes the paternal chromosome is on the right and the maternal on the left
and it could also be the other way around. This way many different and diverse
combinations can happen (this is the second variability source of meiosis: for example,
a new daughter cell could have chromosomes 1, 2’, 3, 4, 5’ etc, while the other would
have
1’, 2, 3’, 4’, 5 etc).
There is no further replication of the genetic material prior to the second division of
meiosis II.
During the 2nd meiotic division, the two chromatids of each chromosome separate into
the daughter cells in a very similar way as mitosis. At the end of meiosis II there will be
13
Unit 5. Genetics
(2022-2023)
four daughter cells, each with the haploid number (n) of chromosomes and genetically
different from one another and from the mother cell (genetic variation).
14
Unit 5. Genetics
(2022-2023)
MENDELIAN GENETICS
Gregor Mendel, the father of genetics,
was an Austrian monk that lived in the XIX
century. He worked on the transmission
of the characters of pea plants through
successive generations. Gregor Mendel
discovered the basic principles of
heredity by breeding garden peas in
carefully planned experiments. Mendel
spoke of heritable factors.
The concepts of gene and
chromosome came later. Walter Sutton
and Theodore Boveri in 1903 proposed
the chromosome theory of inheritance.
And thanks to the works of Watson and
Crick about the nature of DNA, it was
proven that the heritable factors (the
genes) were in fact DNA fragments.
http://www.jic.ac.uk/germplas/pisum/zgs4f1.gif
15
Unit 5. Genetics
(2022-2023)
chromosomes (also diploid). E.g. Humans have 23 chromosomes in their gametes or sex
cells (ovum and sperm). The rest of the cells of our body have 23 pairs (46) of
chromosomes.
ALLELE (OR ALLELOMORPH): An allele is an alternative form that a gene can have due
to successive mutations. They are found in the same locus in each homologous and
carry information for the same character, e.g. the gene that determines straight hair
and that which determines curly hair. A gene can have multiple alleles, but diploid
organisms can only have two of those, as we have our chromosomes in pairs.
HETEROZYGOUS (HYBRID): Organisms having different alleles for a character. E.g. Aa,
Bb, etc.
16
Unit 5. Genetics
(2022-2023)
Generally, males produce small motile gametes, and females produce large non-motile
gametes. Although the anatomical and physiological differences between male and
females are numerous, the chromosomal basis of sex is rather simple. Most frequently,
in determining the sex of an individual there are two chromosomes involved. These are
known as heterochromosomes or sex chromosomes (we have already seen that
chromosomes which do not determine the sex are called autosomes) In humans and
many other species, there are two varieties of sex chromosomes, designated the X and
the Y chromosomes. Females have two X chromosomes (genotype XX), and males have
an X chromosome and a smaller Y chromosome (genotype XY). When meiosis occurs in
the gonads (male testes and female ovaries), the two sex chromosomes segregate, and
each gamete receives one. Each ovum contains one X chromosome. In contrast, half
the sperm cells contain an X chromosome, and half contain a Y chromosome. If a sperm
cell bearing an X chromosome happens to fertilize an ovum, the zygote is XX, a female;
if a sperm cell containing a Y chromosome fertilizes an ovum, the zygote is XY, a male.
Sex is a matter of chance; a 50% probability for each sex.
17