Determining The Most Effective Traits To
Determining The Most Effective Traits To
DOI 10.1007/s12298-016-0347-1
RESEARCH ARTICLE
Received: 23 November 2015 / Revised: 7 March 2016 / Accepted: 14 March 2016 / Published online: 21 March 2016
# Prof. H.S. Srivastava Foundation for Science and Society 2016
Abstract To determine the effective traits to improve saffron weight interred to the regression model and had the highest
yield, a split plot design based on RBCD was done in positive direct and indirect effects on saffron yield. Mainly, it
Mashhad region in Iran for three years (2012–2014). The re- can be derived that the implementation of correct farm man-
sults showed that all traits except number of daughter corm, agement including appropriate sowing date, saffron ecotypes,
fresh weight of daughter corm and dry leaf weight had low proper density, bigger and higher quality saffron corm can
general heritability. Results of genotypic and phenotypic co- play an important role in improving yield components and
efficients of variation and genetic advance demonstrated that subsequently increasing saffron yield.
the majority of traits had a low diversity and the selection did
not have any effect in improving the traits. As a result, the best Keywords Cluster analysis . Genetic advance . Heritability .
way to increase saffron yield is improvement of farm manage- Phenotypic and genotypic path analysis
ment. It was also found that saffron yield had the highest
phenotypic and genotypic correlations with fresh and dry
weight of daughter corm and dry and fresh flower weight. Introduction
Therefore, the efforts to improve these traits will increase saf-
fron yield. According to the present study 5-Jun to 5-Jul was Saffron (Crocus sativus L.) is the oldest plant species which is
found to be the best sowing date for planting saffron. Also, the expensive (Özdemİr et al. 2006; Gómez-Gómez et al. 2012).
Mashhad and Torbat ecotypes were the best ecotypes in this The vegetative propagation is through corms and it is ster-
study. Phenotypic and genotypic path analysis showed that in ile triploid plant (Turhan et al. 2007; Gómez-Gómez et al.
the first step three traits number of daughter corm, fresh flower 2012). Saffron is known for its aromatic properties and
weight and flower number and in the second step traits fresh flavoring in the food industry, use in confectionery
weight of daughter corm, dry flower weight and dry leaf and liquor industries (Gómez-Gómez et al. 2012). There is
increasing interest in saffron because of anticancer properties
and its application in medicine (Magesh et al. 2006;
* Mehdi Rahimi Chryssanthi et al. 2009; Dalezis et al. 2009; Siracusa et al.
[email protected] 2010). Iran is one of the most important countries in the world
where saffron is produced (Jalali-Heravi et al. 2010).
The mature and bigger corms in the previous studies have
1
Young Researchers and Elite Club, Mashhad Branch, Islamic Azad shown more flowers and daughter corms (Molina et al. 2005;
University, Mashhad, Iran
De Juan et al. 2009). Thus, one of the main goals in the
2
Department of Biotechnology, Institute of Science and High production of saffron is to achieve bigger corms (Omidbaigi
Technology and Environmental Sciences, Graduate University of
Advanced Technology, End of Haft Bagh-e-Alavi Highway
2005). In addition, Turhan et al. (2007), Renau-Morata et al.
Knowledge Paradise, 7631133131, P.O.Box: 76315-117, (2012) and Mollafilabi (2004) concluded that corm size is an
Kerman, Iran important factor to determine the presence or absence of
3
Young Researchers and Elite Club, Ahvaz Branch, Islamic Azad flowers even if the corm does not reach to its original size
University, Ahvaz, Iran and produce flowers. Amirnia et al. (2013) and Siracusa
154 Physiol Mol Biol Plants (January–March 2016) 22(1):153–161
et al. (2010) reported that the environment and corm prove- contained 8 culture lines with 3 m length and 25 cm distances
nance have a significant impact on the flower number and from another line (the plot area was 6 m2). Corm distances on
stigma yield. Also researchers such as Molina et al. (2004; lines were 8 cm and 15 cm deep (density was 50 corms m−2).
2005), Gresta et al. (2009) and Maggi et al. (2011) indicated To avoid marginal effects and minimize errors, plots were
that climatic conditions and environments (e.g., temperature, located beside each other by 50 cm distances. To enhance
soil water content) significantly changed quantitative accuracy, margins considered as two lines at the beginning
and qualitative traits of saffron. and at the end of plots as well as 50 cm at two another sides
To identify important traits affecting the yield of plants, we of plots. All agronomical operations (ecotypes and infield
used many multivariate statistical techniques such as cluster preparation, traits measuring, and experimental design) in
analysis, correlation, path analysis, factor analysis, and factor three years were similar, and at the end of each year, the infield
components (Leilah and Al-Khateeb 2005). The former stud- was plowed and corms were harvested for measuring. Rainfed
ies showed that the performance of path analysis to identify conditions met the water requirements at the start of growth
the relationships between the traits is better than correlation (October to November), and plants were drip irrigated from
coefficients (Kozak and Kang 2006; Bahraminejad et al. 2011; December to April.
Darvishzadeh et al. 2011). Correlation coefficient and path Data were collected on the following 13 characters in each
analysis have been used by several researchers (Talebi et al. pot: Flower Number (FN), Fresh Flower Weight (mg) (FFW),
2007; Behradfar et al. 2009) to determine interrelationships Dry Flower Weight (mg) (DFW), Fresh Stigma Weight (mg)
between quantitative characters. (FSW), Dry Stigma Weight (mg) (DSW), Number of daughter
Considering the above facts, this research was undertaken Corm (NDC), Fresh Weight of daughter Corm (mg) (FWDC),
to study the importance of different traits through the estima- Dry Weight of daughter Corm (mg) (DWDC), Length Leaf
tion of genetic parameters, correlation coefficients, cluster (LL), Fresh Leaf Weight (cm) (FLW), Dry Leaf Weight (mg)
analysis and path analysis. The reported information will help (DLW), Biomass (BIO), Harvest Index (HI) and Stigma Yield
to predict the effective traits to improve saffron yield. per m2 (mg m−2) (SY). Then recorded data were analyzed by
using SAS ver. 9.12 and SPSS ver. 21 programs. The coeffi-
cients of variability, heritability and genetic advance as well as
Materials and methods correlation coefficient were estimated according to Johnson
et al. (1955a; 1955b). The cluster analysis based on Ward’s
To determine the effective traits to improve saffron yield, a split method was also used to classify saffron ecotypes. Path coef-
plot experiment based on RBCD was carried out in Mashhad ficients were estimated according to Ehsanzadeh et al. (2004),
region. Sowing dates (05-May, 05-Jun, 05-Jul, 05-Aug. 05-Sep., where saffron yield was kept as the dependent variable and
05-Oct) used as main plots and different saffron ecotypes other contributing traits as independent variables.
(Mashhad, Torbat-jam, Gonabad and Birjand) as sub plot.
Mashhad region is located in 36′15″ latitude, 59′28″ longitude,
and 985 m above the sea level and the soil in the experimental
field was silt-clay with pH 7.8. In this study, different ecotypes Results and discussion
of saffron were evaluated in three distinct years (2011–012,
2012–13 and 2013–14) so that at the end of each year, we drew Analysis of variance
out pervious corms and cultivated new corms in the same farm.
Four saffron samples from different regions of Iran, namely tra- The results of the variance analysis (results are not shown)
ditional saffron production areas, were studied in this work. showed that there were significant differences between years,
Samples 1, 2, and 3 were obtained from the regions of sowing dates, saffron ecotypes, and their interactions with
Mashhad, Torbat-Jam, and Gonabad in Razavi Khorasan prov- respect to all traits. This result enforced that selection of
ince of Iran. Sample 4 was obtained from the region of Birjand in accurate sowing date and appropriate saffron ecotype are
the south Khorasan province of Iran. To prevent Fusarium and important and necessary in each region. Some of the earlier
Penicillium infestations, corms were dipped in a prochloraz so- studies on saffron ecotypes such as the finding of Anastasaki
lution (0.1 %) and dried under forced ventilation for 5–7 h to et al. (2010) on 250 saffron ecotypes and Maggi et al. (2011)
remove the surface water. on 28 authentic saffron samples reported significant differ-
The weight of saffron corms was used in this experiment ences between saffron ecotypes. According to the present
was 10 to 12 g. In each year after preparing the field in April, study 5-Jun to 5-Jul was known the best sowing date for
75 kg ha−1 pure nitrogen, 75 kg ha−1 pure phosphorous, planting saffron. Also, the Mashhad and Torbat ecotypes were
50 kg ha−1 pure potassium were used. The cultivation prac- the best ecotypes in this study. Finally, the saffron corms with
tices used were those commonly used for this crop, and an 10 g and more recommended for cultivation and the corms
organic fertilizer (mature manure) was applied. Each plot with 6 g and smaller are not recommended.
Physiol Mol Biol Plants (January–March 2016) 22(1):153–161 155
The significant differences between traits in given years con- indicated that all studied traits except NDC (CVp= 25.83, CVg=
firmed that studied traits were significantly affected by the en- 21.97) had insignificant variation. In addition, genetic advance
vironment and weather conditions. Thus, the improvement of based on trait mean (Table 1) indicated that genetic advance for
farm management can be effective in improving the traits and all traits except NDC (GAm= 32.89) had a low value. These
subsequently in increasing the saffron yield. Lage and Cantrell results, in total, showed that there is very little variation between
(2009), Molina et al. (2005) and Gresta et al. (2009) reached to saffron ecotypes with respect to all traits. Therefore, the selection
this conclusion that the temperature is one of the environmental for improving of the next saffron generation did not have great
factor to control of growth and flowering in Crocus species. progress. Therefore, the best way to increase the saffron yield is
the improvement of farm management (including proper sowing
date, selecting bigger corms, fertilization, appropriate density,
Genetic parameters
etc.). Sanghera and Kashyap (2012) reported that when genetic
variability within a plant population is low, the possibility of
Heritability is a statistic used in breeding and genetics works
further yield enhancement are scanty. Rubio-Moraga et al.
that estimates how much variation in a phenotypic trait in a
(2009) reported that all saffron accessions appear identical
population is due to genetic variation among individuals in that
clones, not only because of morphological characters but also
population. The response to selection depends on the heritability
at a molecular level. These data strongly suggested that saffron
of the trait and help the plant breeder in breeding program
is a monomorphic species (Caiola et al. 2004).
(Sanghera and Kashyap 2012). The results of the general heri-
tability for studied agronomical traits (Table 1) showed that
traits FN, DSW, FSW, DWDC, HI and SY had the lowest Phenotypic and genotypic correlation coefficients
general heritability (11–28 %) and traits DFW, FFW, LL and
BIO had moderate heritability (44–48 %). As a result, these Measuring the correlation coefficient is a good idea to plant
traits were influenced by the environmental and climatic condi- breeders for produce high yielding cultivars (Mohammadi
tions considerably. On the other hand, it was found that traits et al. 2003). In the present study, in order to study the relation-
NDC, FWDC, and DLW had a high general heritability (65– ships between saffron yield and yield components, phenotypic
72 %) and were slightly affected by the environmental and and genotypic correlation coefficients were calculated. The cor-
climatic conditions. Therefore, we can introduce these traits as relation results (Table 2) indicated that in most cases, the geno-
important criteria for selection of suitable saffron ecotypes. typic correlation is larger than the phenotypic correlation. This
Genetic variability gives a good view of the genetic diversity result was predictable and logical. Because the effects of
of different traits to breeder for use in breeding programs (Singh environmental factors were eliminated in calculation of
et al. 2003). Measuring the genetic diversity is needed to start genotypic correlation coefficient, the relationships were
plant breeding programs in different plants (Ali and Khan 2007). estimated more accurately and realistically. Singh et al. (2003)
Genotypic and phenotypic coefficients of variation (Table 1) stated that genetic correlations are more important than
Table 2 Phenotypic (above diagonal) and genotypic (below diagonal) correlation coefficients between traits of saffron ecotypes
Traits FN FFW DFW FSW DSW NDC FWDC DWDC LL DLW BIO HI SY
FN FN 0.75 ** 0.82 ** 0.93 ** 1.08 ** 0.96 ** 0.97 ** 0.89 ** 0.78 ** 0.90 ** 1.03 ** 0.65 ** 0.76 **
FFW 0.45 ** FFW 0.71 ** 0.75 ** 0.75 ** 0.78 ** 0.83 ** 0.77 ** 0.75 ** 0.77 ** 0.72 ** 0.74 ** 0.98 **
DFW 0.70 ** 0.81 ** DFW 0.75 ** 0.75 ** 0.74 ** 0.78 ** 0.74 ** 0.70 ** 0.77 ** 0.71 ** 0.71 ** 0.98 **
FSW 0.54 ** 0.60 ** 0.63 ** FSW 0.71 ** 0.88 ** 0.76 ** 0.70 ** 0.78 ** 0.87 ** 0.72 ** 0.80 ** 0.79 **
DSW 0.71 ** 0.59 ** 0.75 ** 0.91 ** DSW 0.88 ** 0.76 ** 0.69 ** 0.77 ** 0.86 ** 0.71 ** 0.74 ** 0.73 **
NDC 0.53 ** 0.66 ** 0.67 ** 0.67 ** 0.69 ** NDC 0.84 ** 0.73 ** 0.67 ** 0.74 ** 0.69 ** 0.65 ** 0.82 **
FWDC 0.53 ** 0.66 ** 0.67 ** 0.67 ** 0.69 ** 0.99 ** FWDC 0.60 ** 0.75 ** 0.96 ** 0.70 ** 0.73 ** 1.01 **
DWDC 0.71 ** 0.60 ** 0.70 ** 0.66 ** 0.73 ** 0.54 ** 0.55 ** DWDC 0.66 ** 0.88 ** 0.66 ** 0.75 ** 0.96 **
LL 0.70 ** 0.61 ** 0.71 ** 0.66 ** 0.72 ** 0.55 ** 0.54 ** 0.98 ** LL 0.76 ** 0.66 ** 0.70 ** 0.88 **
DLW 0.72 ** 0.58 ** 0.69 ** 0.70 ** 0.79 ** 0.59 ** 0.58 ** 0.96 ** 0.96 ** DLW 0.75 ** 0.66 ** 0.87 **
BIO 0.71 ** 0.59 ** 0.70 ** 0.71 ** 0.78 ** 0.58 ** 0.59 ** 0.95 ** 0.95 ** 0.98 ** BIO 1.06 ** 0.87 **
HI 0.62 ** 0.56 ** 0.62 ** 0.62 ** 0.67 ** 0.74 ** 0.74 ** 0.71 ** 0.71 ** 0.70 ** 0.70 ** HI 0.83 **
SY 0.64 ** 0.75 ** 0.77 ** 0.65 ** 0.68 ** 0.68 ** 0.68 ** 0.66 ** 0.66 ** 0.65 ** 0.65 ** 0.64 ** SY
Abbreviations are described in Materials and Methods section
** Significant at 1% probability levels
phenotypic correlations because of removing environment ef- due to low estimates of variances and high covariance. Such
fects in calculating genetic correlation coefficients. In this study, results may also have arisen due to sampling errors.
it was found that the saffron yield had the positive and signif- Overall, based on the results of the correlation coefficients, we
icant correlations (phenotypic and genotypic) with all studied can conclude that traits NDC and FWDC are the most important
traits. Therefore, any improvement in yield components can traits to improve yield components and subsequently increase
have a positive effect in increasing the saffron yield. In this saffron yield. Because saffron is a perennial plant, its
study, it was also found that SY had the highest correlation with agronomic traits have high positive phenotypic and genotypic
FWDC (rg= 1.01**; rp= 0.68**), DFW (rg = 0.98**; rp = correlation with each other. Therefore, choosing an appropriate
0.77**), FFW (rg= 0.98**; rp= 0.75**) and DWDC (rg= density and bigger and higher quality saffron corms for
0.96**; rp= 0.66**), respectively. The results show that the planting will improve FN, FFW, LN and DLW and
selection of these traits is useful to improve yield. These results thus subsequently increase saffron yield in the first year and
are supported by previous findings of Gresta et al. (2009). It coming years. Turhan et al. (2007) suggested that the quality of
was also found that traits FWDC with SY, BIO with HI, FN corms such as size and emergence capacity as the number of
with BIO, FN with DSW (Table 2) had a genotypic correlation corms is important in saffron cultivation. On the other hand,
more than unity. In this way, Khanna and Singh (1975) and Molina et al. (2004) showed that the limiting factor for the
Singh and Singh (1979) stated that such estimate was probably flowering is reduced corm size.
Table 3 Phenotypic path analysis (predictors grouped according to first- and second- order variables) in studied saffron ecotypes
Table 4 Genotypic path analysis (predictors grouped according to first- and second- order variables) in studied saffron ecotypes
S.O.V Df FN FFW DFW FSW DSW NDC FWDC DWDC LL DLW BIO HI SY
Year 2 432.9** 129.4 2.6 49.1 1.6 4.3** 17.2** 5.4** 115.4* 0.04 6,017,265.3** 0.00233** 5973.2*
Erorr1 6 8.5 51.8 1.2 13.0 0.4 0.1 0.1 0.1 12.7 0.02 98,980.9 0.00013 784.5
Month 5 1440.5** 1057.8** 122.5** 121.6** 12.8** 9.3** 37.1** 24.8** 401.2** 1.62** 38,381,266.5** 0.00077** 67,660.8**
Year × Month 10 46.5** 112.8 1.7 5.2 0.2 0.5** 1.3** 0.7** 11.7* 0.04* 670,373.2** 0.0001 1089.8
Erorr2 30 7.7 64.8 0.8 2.7 0.5 0.1 0.1 0.2 5.0 0.02 208,471.5 0.0002 533.8
Ecotype 1 130.7** 7315.0** 124.9** 128.2** 4.3** 32.9** 23.9** 9.8** 432.1** 5.87** 31,106,643.5** 0.00158** 9002.4**
Year × Ecotype 5 8.3 60.1 1.9 4.9 0.2 0.1 0.7* 0.4 17.3* 0.14** 300,020.3 0.00016 569.2
Ecotype × Month 2 9.7 528.8** 3.1 18.9** 0.6* 0.1 0.4 0.1 1.2 0.15* 246,244.9 0.00003 730.8
Year × Ecotype × Month 10 11.5 47.9 1.2 2.6 0.1 0.4* 1.1** 0.8** 18.1** 0.01 800,243.8** 0.00006 523.4
Erorr3 144 15.3 46.4 1.1 2.1 0.1 0.2 0.3 0.3 7.1 0.03 351,981.6 0.00006 454.6
Cluster
1 17.62 ± 6.9 357.93 ± 5.9 43.90 ± 1.7 28.86 ± 2.5 5.25 ± 0.7 2.69 ± 32.1 6.31 ± 0.6 3.67 ± 58.5 19.61 ± 1.2 3.16 ± 0.9 6877.63 ± 954.3 0.08 ± 3.8 95.53 ± 9.2
2 16.06 ± 6.7 346.29 ± 5.5 42.38 ± 2.0 27.31 ± 1.5 4.97 ± 0.5 1.91 ± 29.1 5.65 ± 0.6 3.24 ± 56.1 16.78 ± 1.1 2.83 ± 0.8 6118.65 ± 802.9 0.08 ± 3.9 82.62 ± 14.9
Total 16.84 ± 6.9 352.11 ± 9.3 43.14 ± 2.0 28.09 ± 2.2 5.11 ± 0.6 2.30 ± 36.3 5.98 ± 0.7 3.45 ± 59.7 18.19 ± 1.2 3.00 ± 0.9 6498.14 ± 907.4 0.08 ± 4.1 89.07 ± 14.9
159
160 Physiol Mol Biol Plants (January–March 2016) 22(1):153–161
step traits (Table 4 and Fig. 2). Among these traits, FWDC confirmed these traits were influenced by the environment
with a positive direct effect on NDC (0.73) and FFW (0.63) significantly. Results of genotypic and phenotypic coefficients
was found to be the most influential and important trait. of variation and genetic advance also showed that most of the
Therefore, any increase in this trait such as the selection of traits had a low diversity so the selection for improving saffron
bigger and more quality corms can have a high positive effect yield in the next generation did not have a notable progress.
on yield components and consequently will increase the saf- Therefore, the improvement of farm management (such as
fron yield (SY). proper sowing date, selecting bigger and higher quality corm,
It also became evident that DFW with the direct (0.49) and fertilization, appropriate density, etc.) is the best way to increase
indirect (0.49) effects on FFW and the direct (0.31) and indi- the saffron yield. In this study, it was found that saffron yield
rect (0.51) effects on FN had the positive effects on these had the most correlation (genotypic and phenotypic) with fresh
traits. Flower weight is a trait that is directly related to the weight of daughter, dry flower weight, fresh flower weight and
quality and weight of saffron corm. Therefore, corms with a dry weight of daughter corm, respectively. The results of phe-
higher quality and more weight can produce flowers with notypic and genotypic path analysis showed that traits number
more weight and this subsequently increases the saffron yield. of daughter corm, fresh flower weight and flower number in the
first step and trait fresh weight of daughter corm, dry flower
Cluster analysis weight and dry leaf weight in the second step had the most
positive direct and indirect effects on saffron yield. As a result,
Grouping and classifying different saffron ecotypes was per- any improvement in these traits, especially in number of daugh-
formed using all traits based on UPGMA method by cluster ter corm and fresh weight of daughter corm can have a positive
analysis. The results of analysis (Fig. 3) showed that four effect on increasing the saffron yield. Cluster analysis showed
saffron ecotypes were grouped in two clusters. To determine that saffron ecotypes grouped in two clusters. Ecotypes
the validity of clustering, the variance analysis based on the Mashhad and Torbat-Jam (cluster I), compared with ecotypes
cluster numbers was used. Variance analysis results (Table 5) Birjand and Gonabad (cluster II) was more compatible with the
showed significant differences (p < 0.01) between clusters. climatic conditions of Mashhad region.
These results confirmed the validity of cluster analysis and
the dendrogram was also cut in the appropriate position. Compliance with ethical standards
To evaluate and compare the differences between the clus-
ters, the mean and standard deviation of traits in each of the Conflict of interest The authors declare that they have no conflict of
clusters were calculated separately (Table 5). The results interest.
showed that cluster I and II were ranked as the first and second
cluster, respectively. The results showed that the trait means of
cluster I (Mashhad and Torbat-Jam ecotypes) were much
higher than cluster II (Birjand and Gonabad ecotypes).
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