1. Introduction
Definition: water insoluble compounds
Most lipids are fatty acids or ester of fatty acid
They are soluble in non-polar solvents such as
petroleum ether, benzene, chloroform
Functions
Energy storage
Structure of cell membranes
Thermal blanket and cushion
Precursors of hormones (steroids and prostaglandins)
Types:
Fatty acids
Neutral lipids
Phospholipids and other lipids
2. Classification:
Saponifiable—can be
hydrolyzed by NaOH to make soap
Non-saponifiable—cannot be
hydrolyzed, includes sterols such as
cholesterol
Saponifiable lipids are further
subdivided:
Simple- made of fatty acids
plus alcohol
Compound- either phospho- or
glyco- lipids, which contain
phosphate or sugar groups as well
as fatty acids
3. Lipids are non-polar (hydrophobic) compounds, soluble in organic
solvents.
Most membrane lipids are amphipathic, having a non-polar end and a
polar end.
Fatty acids consist of a hydrocarbon chain with a carboxylic acid at one
end.
A 16-C fatty acid: CH3(CH2)14-COO
-
Non-polar polar
A 16-C fatty acid with one cis double bond between C atoms 9-10 may be
represented as 16:1 cis 9
.
5. Some fatty acids and their common names:
14:0 myristic acid; 16:0 palmitic acid; 18:0 stearic
acid; 18:1 cis9
oleic acid
18:2 cis9,12
linoleic acid
18:3 cis9,12,15
-linonenic acid
20:4 cis5,8,11,14
arachidonic acid
20:5 cis5,8,11,14,17
eicosapentaenoic acid (an omega-3)
Double bonds in fatty acids
usually have the cis
configuration.
Most naturally occurring fatty
acids have an even number
of carbon atoms.
C
O
O
1
2
3
4
fatty acid with a cis-9
double bond
7. There is free rotation about C-C bonds in the fatty acid
hydrocarbon, except where there is a double bond.
Each cis double bond causes a kink in the chain.
Rotation about other C-C bonds would permit a more
linear structure than shown, but there would be a kink.
C
O
O
1
2
3
4
fatty acid with a cis-9
double bond
9. Fats & Oils
Simplest lipids, called triacylglycerols
or simply triglycerides. Main form of
fat storage in plants, animals, and
man. Males store 21% fat on
average, females 26%.
10. Essential Fatty
Acids
Fatty acids which cannot be made by the body, but
are important for health and growth are called
essential.
Linolenic acid, found mostly in vegetable oils, is an
important reducer of LDL (low density
lipoproteins), which help to take cholesterol into
the blood and cause atherosclerosis (buildup of
plaque in the blood vessels) a prime cause of heart
attacks
Arachidonic acid is important in making eicosanoids,
molecules which regulate and protect the body
from invasion by microorganisms.
11. Simple Lipids—Fatty Acids
Simple triglycerides contain the same
fatty acid in all three positions; mixed
triglycerides contain two or three
different fatty acids
Fatty acids are carboxylic acids with
from 4 to 20 carbons in the chain. The
chain can be saturated (only single
bonds) or unsaturated (one or more
double bonds in the chain), Saturated
are usually solid at room temperature,
unsaturated are usually liquid
14. H3C
CH3 CH3 CH3 CH3
COOH
PHYTANIC ACID
A plant derived fatty acid with 16 carbons and branches at C 3, C7, C11 and
C15. Present in dairy products and ruminant fats.
A peroxisome responsible for the metabolism of phytanic acid is defective
in some individuals. This leads to a disease called Refsum’s disease
Refsum’s disease is characterized by peripheral polyneuropathy, cerebellar
ataxia and retinitis pigmentosa
15. (CH2)10
H3C C C (CH2)4 COOH
TARIRIC ACID
CH
H2C (CH2)4 C C C C (CH2)7 COOH
ERYTHROGENIC ACID
Less common fatty acids
These are alkyne fatty acids
16. Unsaturated fatty acids
number and position of the double
bond(s)Various conventions are in use for
indicating the
H
C CH(CH2)7COOH
(CH2)7
H3C
1
9
18
10
18:1,9 or 9
18:1
H3C CH2CH2CH2CH2CH2CH2CH2CH CH(CH2)7COOH
1
9
10
17
n
2 3 4 5 6 7 8 9 10 18
9, C18:1 or n-9, 18:1
19. Unsaturated fatty acids
Pentaenoic acid (5 double bonds)
20:5; 5,8,11,14,17 3: timnodonic acid or
EPA (all-cis-5,8,11,14,17-eicosapentaenoic
acid)*
Hexaenoic acid (6 double bonds)
22:6; 4,7,10,13,16,19 3: cervonic acid or
DHA (all-cis-4,7,10,13,16,19-
docosahexaenoic acid)*
Both FAs are found in cold water fish oils
20. Waxes
Waxes are simple lipids which are esters of long
chain alcohols and fatty acids. Beeswax is a 30
C alcohol connected to a 16 C fatty acid
Waxes are completely water resistant and make
the coatings on leaves, skin, feathers, fur, and
fruit. They can be used on floors and furniture
for the same protecting quality.
26. H2C C
H
H2
C
O
O
O
O
O
P
O
OH
O
H2
C
H2
C NH2
H2C C
H
H2
C
O
O
O
O
O
P
O
OH
O
H2
C
H2
C N CH3
CH3
CH3
H2C C
H
H2
C
O
O
O
O
O
P
O
OH
O
HO OH
OH
OH
HO
H2C C
H
H2
C
O
O
O
O
P
O
OH
NH2
CH C
H2
C
OH
O
O
Phosphotidyl Ethanolamine
Phosphotidyl Choline
Phosphotidyl Inositol
Phosphotidyl Serine
28. Ether
glycerophospholipids
Possess an ether linkage instead of an
acyl group at the C-1 position of
glycerol
PAF ( platelet activating factor)
A potent mediator in inflammation, allergic
response and in shock (also responsible for
asthma-like symptom
The ether linkage is stable in either acid or base
Plasmalogens: cis ,-unsaturated ethers
The alpha/beta unsaturated ether can be hydrolyzed more
easily
37. Blood Group A
Blood Group B
Blood Group O
Fuc(a1-2)
Gal(B1-4)
GalNAc(a1-3)
GalNAc(B) O Cer
Fuc(a1-2)
Gal(B1-4)
Gal(a1-3)
GalNAc(B) O Cer
Fuc(a1-2)
Gal(B1-4)GalNAc(B) O Cer
THE UNIVERSAL BLOOD GROUP ANTIGENS ARE
SPHINGOLIPIDS WHICH ARE EXPRESSED ON THE SURFACE
OF ERYTHROCYTES
40. Cholesterol is largely
hydrophobic.
But it has one polar
group, a hydroxyl,
making it
amphipathic.
Cholesterol
HO
Cholesterol, an
important constituent of cell
membranes, has a rigid ring
system and a short
branched hydrocarbon tail.
cholesterol
PDB 1N83
41. Cholesterol
in membrane
Cholesterol inserts into bilayer membranes with
its hydroxyl group oriented toward the aqueous
phase & its hydrophobic ring system
adjacent to fatty acid chains of phospholipids.
The OH group of cholesterol forms hydrogen
bonds with polar phospholipid head groups.
Cholesterol
HO
42. But the presence of cholesterol in a phospholipid membrane interferes
with close packing of fatty acid tails in the crystalline state, and thus
inhibits transition to the crystal state.
Phospholipid membranes with a high concentration of cholesterol have a
fluidity intermediate between the liquid crystal and crystal states.
Cholesterol
in membrane
Interaction with the relatively rigid cholesterol
decreases the mobility of hydrocarbon tails of
phospholipids.
47. Peripheral proteins are on the membrane surface.
They are water-soluble, with mostly hydrophilic
surfaces.
Often peripheral proteins can be dislodged by
conditions that disrupt ionic & H-bond interactions,
e.g., extraction with solutions containing high
concentrations of salts, change of pH, and/or
chelators that bind divalent cations.
Membrane proteins
may be classified as:
peripheral
integral
having a lipid
anchor
integral
lipid
anchor
peripheral
lipid bilayer
Membrane
Proteins
48. Integral proteins have domains that extend into
the hydrocarbon core of the membrane.
Often they span the bilayer.
Intramembrane domains have largely hydrophobic
surfaces, that interact with membrane lipids.
integral
lipid
anchor
peripheral
lipid bilayer
Membrane
Proteins
51. Some proteins bind to membranes via a covalently
attached lipid anchor, that inserts into the bilayer.
A protein may link to the cytosolic surface of the plasma
membrane via a covalently attached fatty acid (e.g.,
palmitate or myristate) or an isoprenoid group.
Palmitate is usually attached via an ester linkage to the
thiol of a cysteine residue.
A protein may be released from plasma membrane to
cytosol via depalmitoylation, hydrolysis of the ester link.
lipid
anchor
membrane
H3C (CH2)14 C
O
S CH2 CH
C
NH
O
palmitate
cysteine
residue
52. An isoprenoid such as a farnesyl
residue, is attached to some
proteins via a thioether linkage to
a cysteine thiol.
C H C H 2
C
H 3 C
C H 3
C H C H 2
C
C H 2
C H 3
C H C H 2 S P r o t e in
C
C H 2
C H 3
f a r n e s y l r e s i d u e l i n k e d t o p r o t e i n v i a c y s t e i n e S
lipid
anchor
membrane
57. Glycosylphosphatidylinositols (GPI) are complex
glycolipids that attach some proteins to the outer
surface of the plasma membrane.
The linkage is similar to the following, although the
oligosaccharide composition may vary:
protein (C-term.) - phosphoethanolamine – mannose -
mannose - mannose - N-acetylglucosamine – inositol (of PI
in membrane)
The protein is tethered some distance out from the
membrane surface by the long oligosaccharide
chain.
GPI-linked proteins may be released from the outer
cell surface by phospholipases.
58. Lipid storage diseases
also known as sphingolipidoses
genetically acquired
due to the deficiency or absence of a catabolic
enzyme
examples:
Tay Sachs disease
Gaucher’s disease
Niemann-Pick disease
Fabry’s disease
http://www.ninds.nih.gov/disorders/lipid_storage_di
seases/lipid_storage_diseases.htm
59. What are Lipid Storage Diseases?
Lipid storage diseases are a group of inherited metabolic
disorders in which harmful amounts of fatty materials (called
lipids) accumulate in some of the body’s cells and tissues. Over
time, this excessive storage of fats can cause permanent
cellular and tissue damage, particularly in the brain, peripheral
nervous system, liver, spleen, and bone marrow. Lipid storage
diseases are inherited from one or both parents who carry a
defective gene. Symptoms may appear early in life or develop
in the teen or even adult years. Neurological complications of
the lipid storage diseases may include ataxia, eye paralysis,
brain degeneration, seizures, learning problems, spasticity,
feeding and swallowing difficulties, slurred speech, loss of
muscle tone, hypersensitivity to touch, burning pain in the
arms and legs, and clouding of the cornea
60. Genetic defects in
ganglioside metabolism
leads to a buildup of gangliosides
(ganglioside GM2) in nerve cells, killing
them
NAc
Gal Gal Gal Glu
NAcNeu
enzyme that hydrolyzes here (beta hexosaminodase)
is absent in Tay-Sachs disease
CER
61. Tay-Sachs disease
a fatal disease which is due to the
deficiency of hexosaminidase A activity
accumulation of ganglioside GM2 in the
brain of infants
mental retardation, blindness, inability to
swallow
a “cherry red “ spot develops on the
macula (back of the the eyes)
Tay-Sachs children usually die by age 5
and often sooner
62. Genetic defects in
globoside metabolism
Fabry’s disease:
Accumulation of ceramide trihexoside in
kidneys of patients who are deficient in
lysosomal -galactosidase A sometimes
referred to as ceramide trihexosidase
Skin rash, kidney failure, pains in the lower
extremities
Now treated with enzyme replacement
therapy: agalsidase beta (Fabrazyme)
63. Genetic defects in
cerebroside metabolism
Krabbe’s disease:
Also known as globoid leukodystrophy
Increased amount of galactocerebroside in the white matter
of the brain
Caused by a deficiency in the lysosomal enzyme
galactocerebrosidase
Gaucher’s disease:
Caused by a deficiency of lysosomal glucocerebrosidase
Increase content of glucocerebroside in the spleen and liver
Erosion of long bones and pelvis
Enzyme replacement therapy is available for the Type I
disease (Imiglucerase or Cerezyme)
Also miglustat (Zavesca) – an oral drug which inhibits the
enzyme glucosylceramide synthase, an essential enzyme for
the synthesis of most glycosphingolipids
65. Genetic defects in
ganglioside metabolism
Metachromatic leukodystrophy
accumulation of sulfogalactocerebroside (sulfatide) in
the central nervous system of patient having a
deficiency of a specific sulfatase
mental retardation, nerves stain yellowish-brown with
cresyl violet dye (metachromasia)
Generalized gangliosidosis
accumulation of ganglioside GM1
deficiency of GM1 ganglioside: -galactosidase
mental retardation, liver enlargement, skeletal
involvement
66. Niemann-Pick disease
principal storage substance:
sphingomyelin which accumulates in
reticuloendothelial cells
enzyme deficiency: sphingomyelinase
liver and spleen enlargement, mental
retardation
71. O R
O
O
O
P
O
O
O-
X
O
COOH
CH3
phospholipase A 2 (enzyme that hydrolyzes
at the sn-2 position - inhibited
indirectly by corticosteroids)
H20
prostaglandin synthase
(also known as cyclooxygenase)
O
O
COOH
OH
very unstable
bond
PGH2
COX is inhibibited by
aspirin and other NSAIDs
74. Prostacyclins,
thromboxanes and
leukotrienes
PGH2 in platelets is converted to
thromboxane A2 (TXA2) a vasoconstrictor
which also promotes platelet aggregation
PGH2 in vascular endothelial cells is
converted to PGI2, a vasodilator which
inhibits platelet aggregation
Aspirin’s irreversible inhibition of platelet
COX leads to its anticoagulant effect
75. Functions of eicosanoids
Prostaglandins – particularly PGE1 – block
gastric production and thus are gastric
protection agents
Misoprostol (Cytotec) is a stable PGE1
analog that is used to prevent ulceration
by long term NSAID treatment
PGE1 also has vasodilator effects
Alprostadil (PGE1) – used to treat infants with
congenital heart defects
Also used in impotance (Muse)
76. Functions of eicosanoids
PGF2 – causes constriction of the
uterus
Carboprost; “Hebamate” (15-Me-PGF2) –
induces abortions
PGE2 is applied locally to help induce
labor at term
77. C5H11
COOH
O
LEUKOTRIENEA 4 (LTA 4)
C5H11
HO
COOH
OH
LEKOTRIENE B 4 (LTB 4)
Non-peptidoleuktrienes: LTA4 is formed by dehydration of
5-HPETE, and LTB4 by hydrolysis of the epoxide of LTA4
Leukotrienes
79. Biological activities of
leukotrienes
1. LTB4 - potent chemoattractent
- mediator of hyperalgesia
- growth factor for keratinocytes
2. LTC4 - constricts lung smooth muscle
- promotes capillary leakage
1000 X histamine
3. LTD4 - constricts smooth muscle; lung
- airway hyperactivity
- vasoconstriction
4. LTE4 - 1000 x less potent than LTD4
(except in asthmatics)
80. C5H11
H S
Cys
gGlu
OH
COOH
LEUKOTRIENE F4 (LTF4)
C5H11
H S
Cys
OH
COOH
Gly
gGlu
LEUKOTRIENE C4 (LTC4)
Leukotrienes are derived from arachidonic acid via the enzyme
5-lipoxygenase which converts arachidonic acid to 5-HPETE
(5-hydroperoxyeicosatetranoic acid) and subsequently by
dehydration to LTA4
peptidoleukotrienes
Leukotrienes
81. C5H11
H S
Cys
OH
COOH
LEUKOTRIENE E 4 (LTE4)
C5H11
H S
Cys
OH
COOH
Gly
LEUKOTRIENE D 4 (LTD4)
Leukotrienes are synthesized in neutrophils, monocytes, macrophages,
mast cells and keratinocytes. Also in lung, spleen, brain and heart.
A mixture of LTC4, LTD4 and LTE4 was previously known as the
slow-reacting substance of anaphylaxis
peptidoleukotrienes
Leukotrienes