| Safe Haskell | Safe-Inferred |
|---|---|
| Language | Haskell98 |
Bio.RNAplexData
Description
This module contains a hierarchical data structure for RNAplex output For more information on RNAplex consult: http://www.bioinf.uni-leipzig.de/Software/RNAplex/
Synopsis
- data RNAplexInteraction = RNAplexInteraction {
- targetIdentifier :: String
- queryIdentifier :: String
- plexSecondaryStructure :: String
- targetDuplexBegin :: Int
- targetDuplexEnd :: Int
- queryDuplexBegin :: Int
- queryDuplexEnd :: Int
- duplexEnergy :: Double
- duplexEnergyWithoutAccessiblity :: Maybe Double
- queryAccessiblity :: Maybe Double
- targetAccessibility :: Maybe Double
- prefilterStart :: Maybe Int
- prefilterStop :: Maybe Int
- prefilterEnergy :: Maybe Double
Documentation
data RNAplexInteraction Source #
Data structure for individual interaction between a target and query nucleic acid seqence
Constructors
Instances
| Show RNAplexInteraction Source # | |
Defined in Bio.RNAplexData Methods showsPrec :: Int -> RNAplexInteraction -> ShowS # show :: RNAplexInteraction -> String # showList :: [RNAplexInteraction] -> ShowS # | |
| Eq RNAplexInteraction Source # | |
Defined in Bio.RNAplexData Methods (==) :: RNAplexInteraction -> RNAplexInteraction -> Bool # (/=) :: RNAplexInteraction -> RNAplexInteraction -> Bool # | |