CHM101 - Unit 3 - Chemical Bonding - Lecture Notes Edited 20240508
CHM101 - Unit 3 - Chemical Bonding - Lecture Notes Edited 20240508
Chemical bonding
1
CHEMICAL BONDNG
• Properties of substances are (in part)
determined by chemical bonds.
• Strong attractive forces that hold atoms
and ions together in compounds/molecules.
• Ionic bond: Involves transfer of one or
more electrons from the valence shell
• A positive and negative ion form giving rise
to electrostatic forces between atoms
forming the bond.
• Occurs between elements with low
ionization energy and high electron affinity.
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CHEMICAL BONDNG
3
Humorous chemist – Ionic bonding
4
Chemical bonding
• Covalent bond: One or more electrons are
shared between two atoms.
• Coordinate covalent bonds: The shared
electron comes from the lone pair of one
of the atoms in the molecule.
• Transfer of electrons results in the more
stable configurations in the ions.
• The tendency to form this stable
configuration is known as octet rule.
Exception He configuration.
5
Chemical bonding
• Why a chemical bond is formed?
• formed by an atom to get more stability.
• Every atom tries to get more stability by
lowering its potential energy.
• This can be achieved by making a bond.
• The potential energy decreases when two
atoms attract each other.
• Hence energy is liberated during the
formation of a chemical bond i.e., it is an
exothermic process.
Chemical bonding
• Few fundamental questions:
• What is the connection between stability
and electronic configuration?
• The noble gas atoms with octet configuration
in their outer shells are very stable.
• Hence every atom tries to get octet
configuration either by losing or gaining or
sharing electrons.
• This is also called as octet rule.
• However this rule may not be followed always
by the atoms.
1. Ionic bond
Li Na F
F F F F
bonding
Fate of valence Non-bonding
electrons
electrons
electrons in
covalent bonds. F F
13
Lewis Theory
1. Electrons in the outermost Double bonds
electronic shell, play a
fundamental role in chemical O C O
bonding
2. In some cases, electrons are
O C O
transferred resulting in positive
and negative ions, attract each
other, form ionic bonds Triple bonds
3. In other cases one more pairs of N N
electrons are shared between
atoms to form a covalent bonds N N
4. Electrons are transferred in such
a way that each atom attains a
stable electron configuration 14
Writing Lewis Structures - Steps
1. Determine the total number of valence
electrons in the structure.
2. Identify the central atoms - often the atom
with the lowest electronegativity. Hydrogen,
is never a central atom.
3. Write the skeletal structure, and join the
atoms in the structure by single covalent
bonds.
4. For each single bond thus formed, subtract
two from the total number of the valence
electrons
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Writing Lewis Structures - Steps
5. With the remaining valence electrons,
complete the octets of the terminal atoms.
Then to the extents possible, complete the
octets of the central atom (s)
6. If at this stage, the central atom (s) lacks
an octet, form multiple covalent bonds by
converting lone pair electrons from
terminal atoms into bond pairs.
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Example problem
Construct Lewis structures for the
molecule H2O.
Solution
Step 1
Total number valence electrons:
1+1+6=8
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Example problem
Step 2, 3
Identify central atom, use pair of
electron per bond e.g.
Step 4
Distribute remaining electrons around
atoms to obtain noble gas configuration.
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Formal charge helps select correct
Lewis structures
• Guideline to determination of the Lewis
structure when competing structures are
available.
• An arbitrarily-calculated quantity known as
the formal charge can often serve as a guide.
• It is the electric charge as atom would
have if all bonding electrons were shared
equally with its bonded neighbors.
• The Lewis structure of the molecule with
no formal charge is the preferred one.
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Formal charge helps select correct
Lewis structures
• The formal charge must be as small as
possible
• Negative charges usually appear on the most
electronegative atoms, positive on the least
electronegative atoms
• The sum of the formal charges of the atoms
in the Lewis structure must equal to zero for
a neutral atom or equal to the ionic charge
for a polyatomic ion
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Formal charge helps select correct
Lewis structures
Calculation
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Calculation of formal charge
Example
H O S O H
O
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Calculation of formal charge
Formal charge on S = 6 – (4 + 0) = + 2
An isolated S atom has There are no. unshared
6 electrons pairs on the S
Sulfur: FC = 6 – (4 + 0) = +2
Hydrogen: FC = 1 – (1 + 0) = 0
Hydroxyl oxygen: FC = 6 – (2 + 4) = 0
Oxygen not bonded to hydrogen: FC = 6 – (1 + 6) = –1
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Both seem correct..but only
one is
Draw the Lewis structure of iodomethane,
CH3I
Carbon dioxide molecule (CO2):
There is no true
double bond
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Exception to the octet rule
H
H B H
BF3
PCl5
SF6
Note:
The bond pairs are usually represented by
a solid line, whereas the lone pairs are
represented by a lobe with two electrons.
The basic ideas of the theory
4) The shape of a molecule can be predicted
from the number and type of valence shell
electron pairs around the central atom.
# of atoms # lone
bonded to pairs on Arrangement of Molecular
Class central atom central atom electron pairs Geometry
B B
10.1
0 lone pairs on central atom
Cl Be Cl
10.1
10.1
VSEPR
# of atoms # lone
bonded to pairs on Arrangement of Molecular
Class central atom central atom electron pairs Geometry
10.1
10.1
VSEPR
# of atoms # lone
bonded to pairs on Arrangement of Molecular
Class central atom central atom electron pairs Geometry
10.1
10.1
VSEPR
# of atoms # lone
bonded to pairs on Arrangement of Molecular
Class central atom central atom electron pairs Geometry
10.1
10.1
lone-pair vs. lone pair lone-pair vs. bonding bonding-pair vs. bonding
repulsion
> pair repulsion
> pair repulsion
VSEPR
# of atoms # lone
bonded to pairs on Arrangement of Molecular
Class central atom central atom electron pairs Geometry
trigonal trigonal
AB3 3 0
planar planar
trigonal
AB2E 2 1 bent
planar
10.1
VSEPR
# of atoms # lone
bonded to pairs on Arrangement of Molecular
Class central atom central atom electron pairs Geometry
10.1
VSEPR
# of atoms # lone
bonded to pairs on Arrangement of Molecular
Class central atom central atom electron pairs Geometry
10.1
VSEPR
# of atoms # lone
bonded to pairs on Arrangement of Molecular
Class central atom central atom electron pairs Geometry
trigonal trigonal
AB5 5 0
bipyramidal bipyramidal
trigonal distorted
AB4E 4 1
bipyramidal tetrahedron
(see-saw)
10.1
VSEPR
# of atoms # lone
bonded to pairs on Arrangement of Molecular
Class central atom central atom electron pairs Geometry
trigonal trigonal
AB5 5 0
bipyramidal bipyramidal
trigonal distorted
AB4E 4 1
bipyramidal tetrahedron
trigonal
AB3E2 3 2 T-shaped
bipyramidal
F
F Cl
10.1
VSEPR
# of atoms # lone
bonded to pairs on Arrangement of Molecular
Class central atom central atom electron pairs Geometry
trigonal trigonal
AB5 5 0
bipyramidal bipyramidal
trigonal distorted
AB4E 4 1
bipyramidal tetrahedron
trigonal
AB3E2 3 2 T-shaped
bipyramidal
trigonal
AB2E3 2 3 linear
bipyramidal
I
I 10.1
VSEPR
# of atoms # lone
bonded to pairs on Arrangement of Molecular
Class central atom central atom electron pairs Geometry
octahedral square
AB5E 5 1
pyramidal
F
F F
Br
F F
10.1
VSEPR
# of atoms # lone
bonded to pairs on Arrangement of Molecular
Class central atom central atom electron pairs Geometry
octahedral square
AB5E 5 1
pyramidal
octahedral square
AB4E2 4 2
planar
F F
Xe
F F
10.1
Polar Covalent Bond
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The Effect of an Electric Field on
Hydrogen Fluoride Molecules
or indicates a positive or negative fractional charge.
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The Pauling Electronegativity Values
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No Net Dipole Moment (Dipoles
Cancel)
electron rich
electron poor
region
region
H F
d+ d-
m=Qxr
Q is the charge
r is the distance between charges
1 D = 3.36 x 10-30 C m 10.2
10.2
10.2
Which of the following molecules have a dipole moment?
H2O, CO2, SO2, and CH4
O S O
H
H O
dipole moment dipole moment
polar molecule polar molecule
H C H
O C O
no dipole moment H
nonpolar molecule no dipole moment
nonpolar molecule
10.2
Does BF3 have a
dipole moment?
10.2
Does CH2Cl2 have
a dipole moment?
10.2
10.2
• No bonds reach 100% ionic character even with
compounds that have the maximum possible
electronegativity difference.
82
Concept of hybridisation
• For example, in a carbon atom which forms
four single bonds the valence-shell s orbital
combines with three valence-shell p orbitals
to form four equivalent sp3 mixtures which
are arranged in a tetrahedral arrangement
around the carbon to bond to four
different atoms.
83
Concept of hybridisation
• Hybrid orbitals are useful in the
explanation of molecular geometry and
atomic bonding properties and are
symmetrically disposed in space.
• Usually hybrid orbitals are formed by
mixing atomic orbitals of comparable
energies.
84
sp3 hybridization (4 hybrid orbitals)
A set of four equivalent orbitals can be obtained that are linear combinations of the valence-
shell (core orbitals are almost never involved in bonding) s and p wave
87
Mixing of orbitals
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Relative energies of pure and hybrid orbitals
89
90
sp2
91
Orbital overlaps in sp2 hybridisation
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sp
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Orbital overlaps in sp hybridisation
94
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Based on the nature of the mixing orbitals,
the hybridization can be classified as,
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Hybridisation and molecule shape
98
Valence Bond Theory
• Valence bond theory states that overlap
between two atomic orbitals forms a covalent
bond between two atoms.
• Two atoms that have unpaired electrons in
their orbitals can overlap to give rise to a
chemical bond.
• A sigma bond (σ) forms when two atomic
orbitals overlap between the nuclei of two
atoms (also known as the internuclear axis).
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Valence Bond Theory
• Pi bonds (π) occur when two atomic orbitals
overlap outside of the space between the
nuclei (outside of the internuclear axis).
• The electrons in the overlapping orbitals get
paired & confined between the nuclei of two
atoms.
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Valence Bond Theory
• The electron density between two bonded
atoms increases due to overlapping.
• This confers stability to the molecule.
• The greater the extent of overlapping,
stronger is the bond formed.
• The direction of the covalent bond is along
the region of overlapping of the atomic
orbitals i.e., covalent bond is directional.
Valence Bond Theory
• There are two types of covalent bonds
based on the pattern of overlapping as
follows:
1) σ-bond:
The covalent bond formed due to
overlapping of atomic orbital along
the inter nucleus axis is called σ-
bond.
Valence Bond Theory
This head-on overlap of orbitals is
referred to as a sigma bond (σ).
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The VBT
Bonding in BF3
112
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Geometry of BF3
114
Bonding in Methane
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116
Molecular Orbital Theory
• In molecular orbital theory, electrons in a molecule are not
assigned to individual chemical bonds between atoms, but are
treated as moving under the influence of the atomic nuclei in
the whole molecule.
• Molecular orbital (MO) theory uses a linear combination of atomic orbitals
(LCAO) to represent molecular orbitals resulting from bonds between
atoms. These are often divided into three types, bonding and antibonding,
A bonding orbital concentrates electron density in the region between a
given pair of atoms, so that its electron density will tend to attract each of
the two nuclei toward the other and hold the two atoms together. An anti-
bonding orbital concentrates electron density "behind" each nucleus and so
tends to pull each of the two nuclei away from the other and actually
weaken the bond between the two nuclei.
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118
119
Molecular Orbital diagram of N2
120
Steps to follow
121
Molecular Orbital diagram of N2
122
123
In N2 molecule , the two nitrogen's are connected using a
triple bond. Its bond energy is high and molecule is highly
stable.
124
Molecular Orbital diagram of N2+
125
Calculate the bond order of N2+ and comment on its stability
126
Molecular Orbital diagram of NO (Nitric Oxide)
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Practice Problem
128
Bonding in Transition metals
129
D block elements
130
Electronic Configuration of Transition Elements
131
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What are complexes?
A metal complex consists of a central metal atom or ion that is bonded to one
or more ligands, which are ions or molecules that contain one or more pairs of
electrons that can be shared with the metal. Metal complexes can be neutral or
charged. A metal ion in solution exists in combination with ligands such as
NH3, Cl- or H2O giving rise to complex ions or coordination compounds.
These complexes contain a central atom or ion, often a transition metal, and a
cluster of ions or neutral molecules surrounding it. Ligands act as Lewis bases
and the central atom acts as a Lewis acid.
Examples: [Co(NH3)6]Cl3, [Fe(C2O4)3]K3, [NiCl4]2− , [CuNH3Cl5]3− [Co(NH3)5Cl]SO4
133
VALENCE BOND THEORY OF COORDINATION COMPLEXES
134
When inner d-orbitals i.e. (n-1) d orbitals are used in
hybridization, the complex is called – inner orbital complex.
A substance which do not contain any unpaired electron is not
attracted by magnet. It is said to be diamagnetic. On the other
hand, a substance which contains one or more unpaired electrons
in the electrons in the d-orbitals, is attracted by a magnetic field .
It is said to be paramagnetic.
135
Types of ligands
• There are two types of ligands namely strong field and weak field ligands. A strong
field ligand is capable of forcing the electrons of the metal atom/ion to pair up (if
required). Pairing is done only to the extent which is required to cause the
hybridization possible for that Co-ordination number (avail some empty orbitals for
accepting electrons from ligands). A weak field ligand is incapable of making the
electrons of the metal atom/ ion to pair up.
• Strong field ligands : CN–, CO, en, NH3,H2O, NO–, Py.
• Weak field ligands : I–, Br–, Cl–, F–, NO3–, OH–, C2O42–, NH3, H2O
136
Valence bond theory applied to the hexaammine chromium (3+) cation
137
It has an octahedral shape, with six dative Cr-N bonds. In
order to explain the six dative Cr-N bonds we would need
to overlap six empty chromium valence orbitals with six
filled valence orbitals of N. We can see that the six
ammine ligands have one electron lone pair each that can
serve as the valence orbitals. Does chromium have six
empty valence orbitals? In order to assess this, we need
first know the oxidation state of the chromium. It is +3
because the ligands are all neutral when the bonds are
cleaved heteroleptically, and the complex cation has a 3+
charge. Therefore, the chromium is a Cr3+ cation.
138
Next, we need to know the electron configuration of the Cr3+. A
neutral Cr atom has the electron configuration 4s13d5. When a
transition metal loses electrons to form a cation, it always loses
its two valence electrons first, and then its d electrons. For
chromium this means that we must remove the one 4s electron,
and two of the five 3d-electrons. The three remaining 3d
electrons are expected to be spin up in three different d orbitals
according to Hund’s rule. How many empty valence orbitals
remain? These would be two 3d and the 4s orbitals. In
addition, it would also be justified to consider the three 4p
orbitals as valence orbitals because the 4p orbitals are
energetically only slightly higher than the 4s orbital. That
means that we would have the six valence orbitals that we
would need to explain the six bonds. 139
There is, however, a complication. The six bonds in the complex are not
distinguishable, but the six valance orbitals in the Cr3+ ion are
distinguishable, for example, the 3d orbitals have different shape and
energy than the 4s orbital, which is different from the 4p orbitals.
Therefore, if we overlapped these orbitals with the electron lone pairs at N,
the bonds would not be equivalent, or indistinguishable. We would have
difficulty to explain the highly symmetric octahedral shape of the
molecule. To go around this issue, valence bond theory uses the concept of
hybridization. In this concept we mathematically mix the wave functions
of the valence orbitals to form hybridized orbitals. In our example we
would mix the two empty d-orbitals, the 4s orbital, and the three 4p
orbitals to form six so-called d2sp3 hybridized orbitals. They have the same
shape and size, and their lobes point toward the corners of an octahedron.
Therefore, we can now create overlap between these six orbitals, and the
six electron lone pairs at N to form six equivalent, indistinguishable Cr-N
bonds. We conclude that we have now satisfactorily explained the bonding
and the shape of the complex.
140
Valence bond theory applied to the tetrahydroxo zincate (2-) complex
141
Square Planar Complex
Tetracyanonickelate (2-)
142
In the valence bond picture we view the Ni-CN bonds as
dative bonds, and the complex is considered an adduct of
Ni2+ and CN-. To explain the four bonds, the Ni2+ ion would
need to have four empty valence orbitals. Ni is a group 10
metal and a neutral Ni atom has the electron configuration
4s23d8. To create a Ni2+ ion we must remove the two 4s
electrons, and thus the Ni2+ has the electron configuration
3d8. Do we have four empty orbitals available? Yes, the 4s
and the three 4p orbitals are empty but again they are not
equivalent and thus not suitable to explain four equivalent
Ni-C bonds. Can we hybridize these orbitals? Yes, we can,
but the resulting four sp3 hybridized orbitals would not be
suitable to explain the square planar shape, only the
tetrahedral shape. What valence bond theory suggests in
this case is to reverse the spin of one of the unpaired d
electrons and move it into the other half-filled d-orbital. 143
This produces an empty d-orbital that we can now hybridize
with the 4s and two of the 2p orbitals to four dsp2-hybridized
orbitals. These four orbitals have the property that their lobes
point toward the vertices of a square, thus they are suitable to
explain the square-planar shape. We can approach the ligands
now on the bond axes to create orbitals overlap between the
empty dsp2 Ni and the electron lone pairs of the ligands. We
also say that the ligand donates its electron lone pairs into the
hybridized metal orbitals. This produces the four covalent
bonds that we need and yields a molecule of a square planar
shape.
144
What are Inner Orbital Complexes
145
146
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What are Outer Orbital Complexes
148
149
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Geometry and magnetic nature of some of the complexes
41
152
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